Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008557

Physical Location & Seq

Genomic Coordinates Reverse (-)

1113986 .. 1117782

Gene Structure 3797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00157310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGATAGCTTACCTGGAGTGTTTCGTCCAAGAAAACGACACCGAATCCCAGCCCTACGACGTCGTCTCCGGCCTCTGCGGCGCTCTCGACCTCCAAGGCACCATCGACTGCGGCGACGGCTCCGAACAAGCCGCCAAGGACTTCGGCGGAATGAACTCCCTCGCTCCCCTCGCCTTCATCCGCCCCGCCGTCCCCGGCGACGTGGCAAGCGTGGTGAGAGCGGCGGCGAATCTGAATCTGACGGCGGCGGCCCGCGGCAACGGGCACTCCATCAACGGGCAGGCCATGGCGGGTCGAGGGCTGGTCCTGGACATGCCGGCCATGGAGGACCATTTCCTAGTGGTGAGGACGAGCAATGACTCCGGCTACGCTGACGTGTCGGGAGGGGCATTATGGGAAGATGTGTTGAAACGGTGCGTTCGGGACTACCGGATGGCGCCGAGGTCGTGGACAGACTACCTCAGTTTAACCGTGGGCGGCACTTTATCCAACGCTGGCGTCAGCGGTCAGGCTTTCCGTTACGGCCCGCAGACCTCGAACGTAACGGAACTGGAGGTCGTTACGGGGAAAGGCGAAACTTTCGTCTGCTCCGAAGCGGAAAACTCGGAGCTCTTCTTTTCTGTTCTTGGCGGGCTGGGCCAGTTCGGCATCATCACCAGAGCTAGAGTCTTGCTCCAGCAAGCCCCGGACATGGTGAGATGGATAAGGCTGGTGTACACCGAGTTCGATGCCTTCACTCTCGACGCAGAGTCGCTCGTCACTCGCTGCCACGAGAGTAGTGACGACGACGACTCCTTCGACTACGTGGAAGGCTTTGCGTTTATGAACAGCGATAACCCGGCGGACGGGTTACCCTCGGTTCCTCTGCACCCGGACCAGATATTCGACCCGACCCGACTTCCTGAGGAAGCTGGATCAGTCCTCTACTGTCTCGAACTGGCTCGCCACTACCGGAACTCTGACCACCCCTCAATTGTTGATATGGGCGTGACAAGGCTGCTGGAGGGCCTAGGATTCGTGGAGGGATTGGAGTTCCAAGTGGACCTGCGATACGAGGAGTTTCTGTTGCGTGTGAAGCAGGCAGAGGAGCACGCCAAGGCCAGCGGCATTTGGGACACTCCTCACCCCTGGCTAAACCTATTCGTGTCGAAATCGGACATCGCGGATTTCGATCGTGTGGTCTTTAAGAAGATCCTCAAGGACGGAATTGGTGGGCCCATGCTGGTTTACCCACTGCTGCGTAGCAAGTGGGATGCTCGTACGTCTGTGGTGTTACCGGATGGTGAGATCTTCTACATAGTGGCGTTGCTGCGGTTCACTCCGGCGTACCCGAAAGGCCCCTCTTTTGAAAGCCTGGTGGCTCAAAACCAGGAGATTGTACAGTACTGCACAAAGAAGGGTTTCGACTTCAAGTTGTATCTCCCGCACTACCGATCGCAGGAGGAATGGAAGCGGCATTTCGGGAATCAGTGGAGCAGATTTGTCGAGCGAAAAACTTGTTTTGATCCGATGGCTATCCTCGCTCCTGGACAGAAAATTTTCCCGAGAATTATTCCTAAACCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009308 GO:0009690 GO:0009823 GO:0009987 GO:0010817 GO:0016491 GO:0016645 GO:0019139 GO:0034754 GO:0042445 GO:0042447 GO:0044237 GO:0046483 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00908 map00908

Pfam Domains

Protein Families

Cytokin-bind FAD_binding_4

Protein Analysis

521

Amino Acids

57.85

Weight (kDa)

4.91

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	56 - 197	1.8e-23	FAD binding domain
Cytokin-bind	PF09265	229 - 514	1.7e-109	Cytokinin dehydrogenase 1, FAD and cytokinin binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21482
fragaria_vesca	FvH4_2g30990 FvH4_2g30990 FvH4_2g30990 FvH4_2g30990 FvH4_2g30990 FvH4_3g04610
malus_domestica	MD08G1071200.v1.1 MD15G1050100.v1.1
prunus_persica	Prupe.1G404300_v2.0.a1 Prupe.1G404300_v2.0.a1 Prupe.1G404300_v2.0.a1
pyrus_communis	pycom08g05900 pycom15g04860
rosa_chinensis	RchiOBHm_Chr6g0311781
rosa_laevigata	RLG00000010374
rosa_multiflora	Rmu_sc0002888.1_g000042
rosa_roxburghii	Rroxscaffold_7G00157310
rosa_samantha	Rh6AG507000 Rh6BG517900 Rh6CG523500 Rh6DG509300
rosa_wichuraiana	Rw6G044110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	63
Acc36I	ACCTGC	1 cut(s)	1053
AccB1I	GGYRCC	2 cut(s)	98, 436
AccBSI	CCGCTC	1 cut(s)	221
AccII	CGCG	2 cut(s)	255, 1163
AclWI	GGATC	3 cut(s)	922, 1186, 1499
AcoI	YGGCCR	1 cut(s)	318
AcsI	RAATTY	1 cut(s)	1536
AcyI	GRCGYC	3 cut(s)	60, 437, 498
AfaI	GTAC	5 cut(s)	716, 1261, 1328, 1380, 1385
AfiI	CCNNNNNNNGG	4 cut(s)	276, 691, 845, 1438
AflIII	ACRYGT	1 cut(s)	375
AgsI	TTSAA	3 cut(s)	409, 1349, 1411
AhdI	GACNNNNNGTC	1 cut(s)	748
AjiI	CACGTC	2 cut(s)	202, 376
AjnI	CCWGG	6 cut(s)	12, 306, 1127, 1353, 1368, 1525
AluBI	AGCT	4 cut(s)	8, 610, 662, 911
AluI	AGCT	4 cut(s)	8, 610, 662, 911
Alw21I	GWGCWC	2 cut(s)	612, 1092
Alw26I	GTCTC	2 cut(s)	70, 935
AlwI	GGATC	3 cut(s)	922, 1186, 1499
Ama87I	CYCGRG	1 cut(s)	1543
ApaI	GGGCCC	1 cut(s)	1218
ApeKI	GCWGC	4 cut(s)	765, 997, 1237, 1309
ApoI	RAATTY	1 cut(s)	1536
ArsI	GACNNNNNNTTYG	6 cut(s)	567, 599, 779, 811, 866, 898
Asp700I	GAANNNNTTC	2 cut(s)	1400, 1538
AspA2I	CCTAGG	1 cut(s)	1009
AspLEI	GCGC	2 cut(s)	83, 439
AsuC2I	CCSGG	4 cut(s)	195, 686, 839, 872
AsuHPI	GGTGA	6 cut(s)	226, 355, 646, 706, 1115, 1295
AvaI	CYCGRG	1 cut(s)	1543
AvaII	GGWCC	4 cut(s)	304, 328, 874, 1042
AvrII	CCTAGG	1 cut(s)	1009
AxyI	CCTNAGG	1 cut(s)	903
BaeGI	GKGCMC	2 cut(s)	267, 1218
BanI	GGYRCC	2 cut(s)	98, 436
BanII	GRGCYC	2 cut(s)	612, 1218
BauI	CACGAG	1 cut(s)	770
Bbv12I	GWGCWC	2 cut(s)	612, 1092
BbvI	GCAGC	4 cut(s)	752, 984, 1224, 1296
BccI	CCATC	6 cut(s)	110, 278, 427, 693, 1274, 1504
BceAI	ACGGC	4 cut(s)	133, 173, 258, 538
BcgI	CGANNNNNNTGC	4 cut(s)	710, 744, 1465, 1499
BciT130I	CCWGG	6 cut(s)	14, 308, 1129, 1355, 1370, 1527
BcnI	CCSGG	4 cut(s)	195, 686, 839, 872
BcoDI	GTCTC	2 cut(s)	70, 935
BfaI	CTAG	4 cut(s)	338, 663, 1010, 1564
BfoI	RGCGCY	2 cut(s)	84, 440
BfuAI	ACCTGC	1 cut(s)	1053
BglI	GCCNNNNNGGC	2 cut(s)	78, 645
BglII	AGATCT	1 cut(s)	1287
BlnI	CCTAGG	1 cut(s)	1009
BmcAI	AGTACT	1 cut(s)	1385
Bme18I	GGWCC	4 cut(s)	304, 328, 874, 1042
BmeRI	GACNNNNNGTC	1 cut(s)	748
BmeT110I	CYCGRG	1 cut(s)	1543
BmgBI	CACGTC	2 cut(s)	202, 376
BmiI	GGNNCC	6 cut(s)	100, 121, 438, 861, 1216, 1339
BmsI	GCATC	3 cut(s)	657, 718, 1243
BplI	GAGNNNNNCTC	2 cut(s)	657, 689
BpmI	CTGGAG	4 cut(s)	35, 572, 659, 1022
BpuEI	CTTGAG	1 cut(s)	1181
BpuMI	CCSGG	4 cut(s)	195, 686, 839, 872
BsaAI	YACGTR	1 cut(s)	805
BsaBI	GATNNNNATC	2 cut(s)	1170, 1514
BsaHI	GRCGYC	3 cut(s)	60, 437, 498
BsaWI	WCCGGW	3 cut(s)	429, 951, 1276
BsaXI	ACNNNNNCTCC	8 cut(s)	50, 80, 251, 281, 776, 806, 1049, 1079
Bsc4I	CCNNNNNNNGG	4 cut(s)	276, 691, 845, 1438
Bse118I	RCCGGY	1 cut(s)	316
Bse1I	ACTGG	3 cut(s)	555, 640, 942
Bse21I	CCTNAGG	1 cut(s)	903
Bse3DI	GCAATG	1 cut(s)	361
Bse8I	GATNNNNATC	2 cut(s)	1170, 1514
BseBI	CCWGG	6 cut(s)	14, 308, 1129, 1355, 1370, 1527
BseGI	GGATG	4 cut(s)	177, 438, 1258, 1285
BseJI	GATNNNNATC	2 cut(s)	1170, 1514
BseLI	CCNNNNNNNGG	4 cut(s)	276, 691, 845, 1438
BseMI	GCAATG	1 cut(s)	361
BseMII	CTCAG	2 cut(s)	475, 894
BseNI	ACTGG	3 cut(s)	555, 640, 942
BseRI	GAGGAG	3 cut(s)	1070, 1100, 1110
BseSI	GKGCMC	2 cut(s)	267, 1218
BseXI	GCAGC	4 cut(s)	752, 984, 1224, 1296
BseYI	CCCAGC	2 cut(s)	48, 634
BsgI	GTGCAG	2 cut(s)	851, 1372
Bsh1236I	CGCG	2 cut(s)	255, 1163
Bsh1285I	CGRYCG	2 cut(s)	1174, 1436
BshNI	GGYRCC	2 cut(s)	98, 436
BsiEI	CGRYCG	2 cut(s)	1174, 1436
BsiHKAI	GWGCWC	2 cut(s)	612, 1092
BsiHKCI	CYCGRG	1 cut(s)	1543
BsiWI	CGTACG	1 cut(s)	1259
BslFI	GGGAC	3 cut(s)	176, 437, 1127
BslI	CCNNNNNNNGG	4 cut(s)	276, 691, 845, 1438
BsmAI	GTCTC	2 cut(s)	70, 935
BsmBI	CGTCTC	1 cut(s)	70
BsmFI	GGGAC	3 cut(s)	176, 437, 1127
BsoBI	CYCGRG	1 cut(s)	1543
Bsp120I	GGGCCC	1 cut(s)	1214
Bsp1286I	GDGCHC	4 cut(s)	267, 612, 1092, 1218
Bsp1407I	TGTACA	2 cut(s)	714, 1378
Bsp143I	GATC	6 cut(s)	914, 1171, 1191, 1287, 1433, 1504
Bsp19I	CCATGG	2 cut(s)	285, 321
BspCNI	CTCAG	2 cut(s)	474, 895
BspFNI	CGCG	2 cut(s)	255, 1163
BspLI	GGNNCC	6 cut(s)	100, 121, 438, 861, 1216, 1339
BspMI	ACCTGC	1 cut(s)	1053
BspPI	GGATC	3 cut(s)	922, 1186, 1499
BspQI	GCTCTTC	1 cut(s)	617
BspT107I	GGYRCC	2 cut(s)	98, 436
BsrBI	CCGCTC	1 cut(s)	221
BsrDI	GCAATG	1 cut(s)	361
BsrFI	RCCGGY	1 cut(s)	316
BsrGI	TGTACA	2 cut(s)	714, 1378
BsrI	ACTGG	3 cut(s)	555, 640, 942
BssAI	RCCGGY	1 cut(s)	316
BssMI	GATC	6 cut(s)	914, 1171, 1191, 1287, 1433, 1504
BssNI	GRCGYC	3 cut(s)	60, 437, 498
BssSI	CACGAG	1 cut(s)	770
BssT1I	CCWWGG	6 cut(s)	94, 135, 285, 321, 1009, 1095
Bst2BI	CACGAG	1 cut(s)	770
Bst2UI	CCWGG	6 cut(s)	14, 308, 1129, 1355, 1370, 1527
Bst4CI	ACNGT	4 cut(s)	414, 472, 929, 1383
Bst6I	CTCTTC	1 cut(s)	617
BstACI	GRCGYC	3 cut(s)	60, 437, 498
BstAUI	TGTACA	2 cut(s)	714, 1378
BstBAI	YACGTR	1 cut(s)	805
BstDEI	CTNAG	2 cut(s)	461, 903
BstDSI	CCRYGG	4 cut(s)	253, 285, 321, 471
BstEII	GGTNACC	1 cut(s)	849
BstF5I	GGATG	4 cut(s)	177, 438, 1258, 1285
BstFNI	CGCG	2 cut(s)	255, 1163
BstH2I	RGCGCY	2 cut(s)	84, 440
BstHHI	GCGC	2 cut(s)	83, 439
BstKTI	GATC	6 cut(s)	917, 1174, 1194, 1290, 1436, 1507
BstMAI	GTCTC	2 cut(s)	70, 935
BstMBI	GATC	6 cut(s)	914, 1171, 1191, 1287, 1433, 1504
BstMCI	CGRYCG	2 cut(s)	1174, 1436
BstMWI	GCNNNNNNNGC	7 cut(s)	78, 117, 170, 636, 645, 1075, 1520
BstNI	CCWGG	6 cut(s)	14, 308, 1129, 1355, 1370, 1527
BstNSI	RCATGY	1 cut(s)	316
BstPI	GGTNACC	1 cut(s)	849
BstSLI	GKGCMC	2 cut(s)	267, 1218
BstUI	CGCG	2 cut(s)	255, 1163
BstV1I	GCAGC	4 cut(s)	752, 984, 1224, 1296
BstX2I	RGATCY	2 cut(s)	1191, 1287
BstYI	RGATCY	2 cut(s)	1191, 1287
Bsu36I	CCTNAGG	1 cut(s)	903
BtgI	CCRYGG	4 cut(s)	253, 285, 321, 471
BtgZI	GCGATG	1 cut(s)	1144
BtrI	CACGTC	2 cut(s)	202, 376
BtsCI	GGATG	4 cut(s)	177, 438, 1258, 1285
BtsI	GCAGTG	1 cut(s)	1232
BtsIMutI	CAGTG	2 cut(s)	1232, 1475
BveI	ACCTGC	1 cut(s)	1053
CfoI	GCGC	2 cut(s)	83, 439
Cfr10I	RCCGGY	1 cut(s)	316
Cfr42I	CCGCGG	1 cut(s)	256
CseI	GACGC	2 cut(s)	487, 752
Csp6I	GTAC	5 cut(s)	715, 1260, 1327, 1379, 1384
CviAII	CATG	5 cut(s)	286, 313, 322, 691, 1219
CviQI	GTAC	5 cut(s)	715, 1260, 1327, 1379, 1384
DdeI	CTNAG	2 cut(s)	461, 903
DinI	GGCGCC	1 cut(s)	438
DpnI	GATC	6 cut(s)	916, 1173, 1193, 1289, 1435, 1506
DpnII	GATC	6 cut(s)	914, 1171, 1191, 1287, 1433, 1504
DriI	GACNNNNNGTC	1 cut(s)	748
EaeI	YGGCCR	1 cut(s)	318
Eam1104I	CTCTTC	1 cut(s)	617
Eam1105I	GACNNNNNGTC	1 cut(s)	748
EarI	CTCTTC	1 cut(s)	617
EciI	GGCGGA	3 cut(s)	162, 170, 857
Ecl136II	GAGCTC	1 cut(s)	610
Eco130I	CCWWGG	6 cut(s)	94, 135, 285, 321, 1009, 1095
Eco24I	GRGCYC	2 cut(s)	612, 1218
Eco47I	GGWCC	4 cut(s)	304, 328, 874, 1042
Eco53kI	GAGCTC	1 cut(s)	610
Eco81I	CCTNAGG	1 cut(s)	903
Eco88I	CYCGRG	1 cut(s)	1543
Eco91I	GGTNACC	1 cut(s)	849
EcoICRI	GAGCTC	1 cut(s)	610
EcoO109I	RGGNCCY	2 cut(s)	1006, 1337
EcoO65I	GGTNACC	1 cut(s)	849
EcoRII	CCWGG	6 cut(s)	12, 306, 1127, 1353, 1368, 1525
EcoT14I	CCWWGG	6 cut(s)	94, 135, 285, 321, 1009, 1095
EcoT38I	GRGCYC	2 cut(s)	612, 1218
EgeI	GGCGCC	1 cut(s)	438
EheI	GGCGCC	1 cut(s)	438
ErhI	CCWWGG	6 cut(s)	94, 135, 285, 321, 1009, 1095
Esp3I	CGTCTC	1 cut(s)	70
FaeI	CATG	5 cut(s)	289, 316, 325, 694, 1222
FaiI	YATR	9 cut(s)	287, 314, 323, 394, 692, 824, 983, 1220, 1298
FaqI	GGGAC	3 cut(s)	176, 437, 1127
FatI	CATG	5 cut(s)	285, 312, 321, 690, 1218
FauI	CCCGC	6 cut(s)	193, 260, 283, 534, 623, 1431
FokI	GGATG	4 cut(s)	164, 445, 1265, 1292
FriOI	GRGCYC	2 cut(s)	612, 1218
FspBI	CTAG	4 cut(s)	338, 663, 1010, 1564
GlaI	GCGC	2 cut(s)	82, 438
GsaI	CCCAGC	2 cut(s)	52, 638
GsuI	CTGGAG	4 cut(s)	35, 572, 659, 1022
HaeII	RGCGCY	2 cut(s)	84, 440
HgaI	GACGC	2 cut(s)	487, 752
HhaI	GCGC	2 cut(s)	83, 439
Hin1I	GRCGYC	3 cut(s)	60, 437, 498
Hin1II	CATG	5 cut(s)	289, 316, 325, 694, 1222
Hin6I	GCGC	2 cut(s)	81, 437
HinP1I	GCGC	2 cut(s)	81, 437
HinfI	GANTC	9 cut(s)	44, 229, 235, 359, 666, 749, 791, 1014, 1465
HphI	GGTGA	6 cut(s)	226, 355, 646, 706, 1115, 1295
Hpy166II	GTNNAC	6 cut(s)	450, 715, 717, 1042, 1228, 1317
Hpy188I	TCNGA	8 cut(s)	124, 234, 240, 592, 607, 961, 1156, 1509
Hpy188III	TCNNGA	8 cut(s)	86, 381, 422, 740, 902, 932, 1462, 1543
Hpy8I	GTNNAC	6 cut(s)	450, 715, 717, 1042, 1228, 1317
Hpy99I	CGWCG	7 cut(s)	62, 65, 119, 203, 746, 788, 791
HpyAV	CCTTC	5 cut(s)	184, 742, 803, 805, 1390
HpyCH4III	ACNGT	4 cut(s)	414, 472, 929, 1383
HpyCH4IV	ACGT	6 cut(s)	60, 201, 375, 540, 804, 1262
HpyCH4V	TGCA	2 cut(s)	868, 1389
HpyF10VI	GCNNNNNNNGC	7 cut(s)	78, 117, 170, 636, 645, 1075, 1520
HpyF3I	CTNAG	2 cut(s)	461, 903
HpySE526I	ACGT	6 cut(s)	60, 201, 375, 540, 804, 1262
Hsp92I	GRCGYC	3 cut(s)	60, 437, 498
Hsp92II	CATG	5 cut(s)	289, 316, 325, 694, 1222
HspAI	GCGC	2 cut(s)	81, 437
KasI	GGCGCC	1 cut(s)	436
KroI	GCCGGC	1 cut(s)	316
KroNI	GCCGGC	1 cut(s)	318
KspI	CCGCGG	1 cut(s)	256
Kzo9I	GATC	6 cut(s)	914, 1171, 1191, 1287, 1433, 1504
LguI	GCTCTTC	1 cut(s)	617
LmnI	GCTCC	8 cut(s)	125, 169, 593, 607, 678, 1087, 1473, 1528
Lsp1109I	GCAGC	4 cut(s)	752, 984, 1224, 1296
LweI	GCATC	3 cut(s)	657, 718, 1243
MaeI	CTAG	4 cut(s)	338, 663, 1010, 1564
MaeII	ACGT	6 cut(s)	60, 201, 375, 540, 804, 1262
MaeIII	GTNAC	8 cut(s)	518, 541, 559, 757, 779, 849, 988, 1272
MalI	GATC	6 cut(s)	916, 1173, 1193, 1289, 1435, 1506
MbiI	CCGCTC	1 cut(s)	221
MboI	GATC	6 cut(s)	914, 1171, 1191, 1287, 1433, 1504
MboII	GAAGA	4 cut(s)	410, 604, 1201, 1282
MfeI	CAATTG	1 cut(s)	972
MflI	RGATCY	2 cut(s)	1191, 1287
MhlI	GDGCHC	4 cut(s)	267, 612, 1092, 1218
MluCI	AATT	4 cut(s)	972, 1206, 1536, 1548
Mly113I	GGCGCC	1 cut(s)	437
MlyI	GAGTC	4 cut(s)	353, 675, 758, 785
MmeI	TCCRAC	1 cut(s)	513
MroNI	GCCGGC	1 cut(s)	316
MroXI	GAANNNNTTC	2 cut(s)	1400, 1538
MseI	TTAA	2 cut(s)	467, 1185
MspA1I	CMGCKG	3 cut(s)	255, 504, 1104
MunI	CAATTG	1 cut(s)	972
MvaI	CCWGG	6 cut(s)	14, 308, 1129, 1355, 1370, 1527
MvnI	CGCG	2 cut(s)	255, 1163
MwoI	GCNNNNNNNGC	7 cut(s)	78, 117, 170, 636, 645, 1075, 1520
NaeI	GCCGGC	1 cut(s)	318
NarI	GGCGCC	1 cut(s)	437
NciI	CCSGG	4 cut(s)	195, 686, 839, 872
NcoI	CCATGG	2 cut(s)	285, 321
NdeII	GATC	6 cut(s)	914, 1171, 1191, 1287, 1433, 1504
NgoMIV	GCCGGC	1 cut(s)	316
NlaIII	CATG	5 cut(s)	289, 316, 325, 694, 1222
NlaIV	GGNNCC	6 cut(s)	100, 121, 438, 861, 1216, 1339
NmeAIII	GCCGAG	1 cut(s)	465
NmuCI	GTSAC	3 cut(s)	757, 779, 988
NspI	RCATGY	1 cut(s)	316
PciSI	GCTCTTC	1 cut(s)	617
PcsI	WCGNNNNNNNCGW	5 cut(s)	111, 207, 588, 795, 1167
PdiI	GCCGGC	1 cut(s)	318
PdmI	GAANNNNTTC	2 cut(s)	1400, 1538
PfeI	GAWTC	5 cut(s)	44, 229, 235, 1014, 1465
Pfl23II	CGTACG	1 cut(s)	1259
PflFI	GACNNNGTC	1 cut(s)	62
PfoI	TCCNGGA	2 cut(s)	306, 1525
Ple19I	CGATCG	2 cut(s)	1174, 1436
PleI	GAGTC	4 cut(s)	353, 674, 757, 785
PluTI	GGCGCC	1 cut(s)	440
PpsI	GAGTC	4 cut(s)	353, 674, 757, 785
Ppu21I	YACGTR	1 cut(s)	805
Psp124BI	GAGCTC	1 cut(s)	612
Psp6I	CCWGG	6 cut(s)	12, 306, 1127, 1353, 1368, 1525
PspEI	GGTNACC	1 cut(s)	849
PspFI	CCCAGC	2 cut(s)	48, 634
PspGI	CCWGG	6 cut(s)	12, 306, 1127, 1353, 1368, 1525
PspLI	CGTACG	1 cut(s)	1259
PspN4I	GGNNCC	6 cut(s)	100, 121, 438, 861, 1216, 1339
PspOMI	GGGCCC	1 cut(s)	1214
PsrI	GAACNNNNNNTAC	2 cut(s)	707, 739
PsuI	RGATCY	2 cut(s)	1191, 1287
PsyI	GACNNNGTC	1 cut(s)	62
PvuI	CGATCG	2 cut(s)	1174, 1436
RsaI	GTAC	5 cut(s)	716, 1261, 1328, 1380, 1385
RsaNI	GTAC	5 cut(s)	715, 1260, 1327, 1379, 1384
SacI	GAGCTC	1 cut(s)	612
SacII	CCGCGG	1 cut(s)	256
SapI	GCTCTTC	1 cut(s)	617
SaqAI	TTAA	2 cut(s)	467, 1185
Sau3AI	GATC	6 cut(s)	914, 1171, 1191, 1287, 1433, 1504
ScaI	AGTACT	1 cut(s)	1385
SchI	GAGTC	4 cut(s)	353, 675, 758, 785
SduI	GDGCHC	4 cut(s)	267, 612, 1092, 1218
SfaNI	GCATC	3 cut(s)	657, 718, 1243
SfoI	GGCGCC	1 cut(s)	438
Sfr303I	CCGCGG	1 cut(s)	256
SgrBI	CCGCGG	1 cut(s)	256
SinI	GGWCC	4 cut(s)	304, 328, 874, 1042
SmlI	CTYRAG	1 cut(s)	1196
SmoI	CTYRAG	1 cut(s)	1196
Sse9I	AATT	4 cut(s)	972, 1206, 1536, 1548
SspDI	GGCGCC	1 cut(s)	436
SspMI	CTAG	4 cut(s)	338, 663, 1010, 1564
SstI	GAGCTC	1 cut(s)	612
StyI	CCWWGG	6 cut(s)	94, 135, 285, 321, 1009, 1095
TaaI	ACNGT	4 cut(s)	414, 472, 929, 1383
TaiI	ACGT	6 cut(s)	63, 204, 378, 543, 807, 1265
TasI	AATT	4 cut(s)	972, 1206, 1536, 1548
TatI	WGTACW	3 cut(s)	714, 1378, 1383
TfiI	GAWTC	5 cut(s)	44, 229, 235, 1014, 1465
Tru1I	TTAA	2 cut(s)	467, 1185
Tru9I	TTAA	2 cut(s)	467, 1185
TscAI	CASTG	2 cut(s)	1239, 1475
TseFI	GTSAC	3 cut(s)	757, 779, 988
TseI	GCWGC	4 cut(s)	765, 997, 1237, 1309
Tsp45I	GTSAC	3 cut(s)	757, 779, 988
TspDTI	ATGAA	3 cut(s)	166, 167, 839
TspGWI	ACGGA	3 cut(s)	506, 560, 1218
TspRI	CASTG	2 cut(s)	1239, 1475
Tth111I	GACNNNGTC	1 cut(s)	62
VpaK11BI	GGWCC	4 cut(s)	304, 328, 874, 1042
XapI	RAATTY	1 cut(s)	1536
XceI	RCATGY	1 cut(s)	316
XmaJI	CCTAGG	1 cut(s)	1009
XmnI	GAANNNNTTC	2 cut(s)	1400, 1538
XspI	CTAG	4 cut(s)	338, 663, 1010, 1564
ZraI	GACGTC	1 cut(s)	61
ZrmI	AGTACT	1 cut(s)	1385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.