Clathrin assembly protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25430 AT4G32285 AT4G32285 |
| fragaria_vesca | FvH4_2g28990 FvH4_2g28990 FvH4_2g28990 FvH4_2g28990 |
| malus_domestica | MD00G1144700.v1.1 MD08G1150700.v1.1 |
| prunus_persica | Prupe.1G481500_v2.0.a1 Prupe.1G481500_v2.0.a1 |
| pyrus_communis | pycom08g12710 pycom15g11360 |
| rosa_chinensis | RchiOBHm_Chr6g0297851 |
| rosa_laevigata | RLG00000011556 |
| rosa_multiflora | Rmu_sc0003137.1_g000015 |
| rosa_roxburghii | Rroxscaffold_7G00170150 Rroxscaffold_7G00179000 |
| rosa_rugosa | Rorug06G0275900 Rorug06G0276000 |
| rosa_samantha | Rh6AG386600 Rh6BG395200 Rh6CG401000 Rh6DG387300 |
| rosa_wichuraiana | Rw6G033690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 98, 181 |
| AatII | GACGTC | 1 cut(s) | 122 |
| AbsI | CCTCGAGG | 1 cut(s) | 95 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccBSI | CCGCTC | 1 cut(s) | 477 |
| AccIII | TCCGGA | 4 cut(s) | 18, 931, 1045, 1126 |
| AclWI | GGATC | 8 cut(s) | 10, 51, 257, 447, 783, 1383, 1396, 1551 |
| AcoI | YGGCCR | 1 cut(s) | 138 |
| AcsI | RAATTY | 2 cut(s) | 547, 738 |
| AcyI | GRCGYC | 2 cut(s) | 5, 119 |
| AfaI | GTAC | 5 cut(s) | 329, 434, 587, 647, 1601 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 88, 311, 417, 717, 718, 1370, 1412, 1437 |
| AflIII | ACRYGT | 1 cut(s) | 201 |
| AjnI | CCWGG | 4 cut(s) | 81, 185, 1363, 1391 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1108, 1140 |
| AluBI | AGCT | 8 cut(s) | 393, 454, 519, 868, 988, 1319, 1400, 1451 |
| AluI | AGCT | 8 cut(s) | 393, 454, 519, 868, 988, 1319, 1400, 1451 |
| Alw21I | GWGCWC | 4 cut(s) | 14, 312, 395, 521 |
| Alw26I | GTCTC | 3 cut(s) | 561, 851, 1073 |
| AlwI | GGATC | 8 cut(s) | 10, 51, 257, 447, 783, 1383, 1396, 1551 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 769, 1276 |
| Ama87I | CYCGRG | 5 cut(s) | 95, 311, 388, 449, 1460 |
| Aor13HI | TCCGGA | 4 cut(s) | 18, 931, 1045, 1126 |
| AoxI | GGCC | 4 cut(s) | 84, 138, 794, 1347 |
| ApeKI | GCWGC | 3 cut(s) | 1417, 1451, 1589 |
| ApoI | RAATTY | 2 cut(s) | 547, 738 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 539, 571 |
| AspLEI | GCGC | 6 cut(s) | 7, 243, 259, 385, 1030, 1213 |
| AspS9I | GGNCC | 9 cut(s) | 85, 91, 277, 345, 400, 795, 1107, 1348, 1361 |
| AsuC2I | CCSGG | 6 cut(s) | 89, 305, 802, 845, 1461, 1462 |
| AsuHPI | GGTGA | 4 cut(s) | 679, 862, 1276, 1420 |
| AsuII | TTCGAA | 1 cut(s) | 545 |
| AvaI | CYCGRG | 5 cut(s) | 95, 311, 388, 449, 1460 |
| AvaII | GGWCC | 6 cut(s) | 91, 277, 345, 400, 1107, 1361 |
| AxyI | CCTNAGG | 1 cut(s) | 1242 |
| BamHI | GGATCC | 1 cut(s) | 1388 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 3 cut(s) | 395, 521, 1176 |
| BauI | CACGAG | 2 cut(s) | 125, 394 |
| Bbv12I | GWGCWC | 4 cut(s) | 14, 312, 395, 521 |
| BbvI | GCAGC | 3 cut(s) | 1429, 1438, 1601 |
| BccI | CCATC | 3 cut(s) | 290, 1414, 1534 |
| BceAI | ACGGC | 2 cut(s) | 20, 664 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 43, 77 |
| BciT130I | CCWGG | 4 cut(s) | 83, 187, 1365, 1393 |
| BciVI | GTATCC | 2 cut(s) | 939, 1053 |
| BcnI | CCSGG | 6 cut(s) | 89, 305, 802, 845, 1461, 1462 |
| BcoDI | GTCTC | 3 cut(s) | 561, 851, 1073 |
| BfaI | CTAG | 1 cut(s) | 1512 |
| BfmI | CTRYAG | 1 cut(s) | 1452 |
| BfoI | RGCGCY | 2 cut(s) | 8, 260 |
| BfuI | GTATCC | 2 cut(s) | 939, 1053 |
| BmcAI | AGTACT | 1 cut(s) | 1601 |
| Bme18I | GGWCC | 6 cut(s) | 91, 277, 345, 400, 1107, 1361 |
| BmeT110I | CYCGRG | 5 cut(s) | 95, 311, 388, 449, 1460 |
| BmgT120I | GGNCC | 9 cut(s) | 85, 91, 277, 345, 400, 795, 1107, 1348, 1361 |
| BmsI | GCATC | 8 cut(s) | 63, 69, 159, 261, 447, 943, 1312, 1588 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 371, 403, 1210, 1242 |
| BpmI | CTGGAG | 3 cut(s) | 1097, 1143, 1431 |
| Bpu14I | TTCGAA | 1 cut(s) | 545 |
| BpuEI | CTTGAG | 1 cut(s) | 245 |
| BpuMI | CCSGG | 6 cut(s) | 89, 305, 802, 845, 1461, 1462 |
| Bsa29I | ATCGAT | 2 cut(s) | 1546, 1570 |
| BsaHI | GRCGYC | 2 cut(s) | 5, 119 |
| BsaI | GGTCTC | 2 cut(s) | 561, 851 |
| BsaJI | CCNNGG | 7 cut(s) | 66, 87, 186, 1110, 1392, 1431, 1460 |
| BsaWI | WCCGGW | 4 cut(s) | 18, 931, 1045, 1126 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 88, 311, 417, 717, 718, 1370, 1412, 1437 |
| Bse118I | RCCGGY | 2 cut(s) | 136, 1358 |
| Bse1I | ACTGG | 5 cut(s) | 251, 1160, 1281, 1485, 1619 |
| Bse21I | CCTNAGG | 1 cut(s) | 1242 |
| BseAI | TCCGGA | 4 cut(s) | 18, 931, 1045, 1126 |
| BseBI | CCWGG | 4 cut(s) | 83, 187, 1365, 1393 |
| BseCI | ATCGAT | 2 cut(s) | 1546, 1570 |
| BseDI | CCNNGG | 7 cut(s) | 66, 87, 186, 1110, 1392, 1431, 1460 |
| BseGI | GGATG | 3 cut(s) | 153, 633, 1545 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 88, 311, 417, 717, 718, 1370, 1412, 1437 |
| BseMII | CTCAG | 1 cut(s) | 1233 |
| BseNI | ACTGG | 5 cut(s) | 251, 1160, 1281, 1485, 1619 |
| BseRI | GAGGAG | 6 cut(s) | 606, 636, 646, 1103, 1181, 1184 |
| BseXI | GCAGC | 3 cut(s) | 1429, 1438, 1601 |
| Bsh1285I | CGRYCG | 2 cut(s) | 108, 1034 |
| BshFI | GGCC | 4 cut(s) | 86, 140, 796, 1349 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BshVI | ATCGAT | 2 cut(s) | 1546, 1570 |
| BsiEI | CGRYCG | 2 cut(s) | 108, 1034 |
| BsiHKAI | GWGCWC | 4 cut(s) | 14, 312, 395, 521 |
| BsiHKCI | CYCGRG | 5 cut(s) | 95, 311, 388, 449, 1460 |
| BsiWI | CGTACG | 1 cut(s) | 645 |
| BslFI | GGGAC | 5 cut(s) | 329, 358, 389, 413, 1115 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 88, 311, 417, 717, 718, 1370, 1412, 1437 |
| BsmAI | GTCTC | 3 cut(s) | 561, 851, 1073 |
| BsmFI | GGGAC | 5 cut(s) | 329, 358, 389, 413, 1115 |
| BsnI | GGCC | 4 cut(s) | 86, 140, 796, 1349 |
| Bso31I | GGTCTC | 2 cut(s) | 561, 851 |
| BsoBI | CYCGRG | 5 cut(s) | 95, 311, 388, 449, 1460 |
| Bsp119I | TTCGAA | 1 cut(s) | 545 |
| Bsp1286I | GDGCHC | 5 cut(s) | 14, 312, 395, 521, 1176 |
| Bsp13I | TCCGGA | 4 cut(s) | 18, 931, 1045, 1126 |
| Bsp68I | TCGCGA | 3 cut(s) | 104, 606, 746 |
| BspANI | GGCC | 4 cut(s) | 86, 140, 796, 1349 |
| BspCNI | CTCAG | 1 cut(s) | 1234 |
| BspDI | ATCGAT | 2 cut(s) | 1546, 1570 |
| BspEI | TCCGGA | 4 cut(s) | 18, 931, 1045, 1126 |
| BspMAI | CTGCAG | 1 cut(s) | 1456 |
| BspPI | GGATC | 8 cut(s) | 10, 51, 257, 447, 783, 1383, 1396, 1551 |
| BspQI | GCTCTTC | 2 cut(s) | 467, 1209 |
| BspT104I | TTCGAA | 1 cut(s) | 545 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTNI | GGTCTC | 2 cut(s) | 561, 851 |
| BsrBI | CCGCTC | 1 cut(s) | 477 |
| BsrFI | RCCGGY | 2 cut(s) | 136, 1358 |
| BsrI | ACTGG | 5 cut(s) | 251, 1160, 1281, 1485, 1619 |
| BssAI | RCCGGY | 2 cut(s) | 136, 1358 |
| BssECI | CCNNGG | 7 cut(s) | 66, 87, 186, 1110, 1392, 1431, 1460 |
| BssNI | GRCGYC | 2 cut(s) | 5, 119 |
| BssSI | CACGAG | 2 cut(s) | 125, 394 |
| BssT1I | CCWWGG | 2 cut(s) | 66, 1110 |
| Bst2BI | CACGAG | 2 cut(s) | 125, 394 |
| Bst2UI | CCWGG | 4 cut(s) | 83, 187, 1365, 1393 |
| Bst4CI | ACNGT | 1 cut(s) | 1562 |
| Bst6I | CTCTTC | 3 cut(s) | 467, 686, 1209 |
| BstACI | GRCGYC | 2 cut(s) | 5, 119 |
| BstBI | TTCGAA | 1 cut(s) | 545 |
| BstC8I | GCNNGC | 5 cut(s) | 76, 138, 142, 205, 1146 |
| BstDEI | CTNAG | 2 cut(s) | 810, 1242 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 415 |
| BstF5I | GGATG | 3 cut(s) | 153, 633, 1545 |
| BstH2I | RGCGCY | 2 cut(s) | 8, 260 |
| BstHHI | GCGC | 6 cut(s) | 7, 243, 259, 385, 1030, 1213 |
| BstMAI | GTCTC | 3 cut(s) | 561, 851, 1073 |
| BstMCI | CGRYCG | 2 cut(s) | 108, 1034 |
| BstNI | CCWGG | 4 cut(s) | 83, 187, 1365, 1393 |
| BstNSI | RCATGY | 1 cut(s) | 1596 |
| BstSFI | CTRYAG | 1 cut(s) | 1452 |
| BstV1I | GCAGC | 3 cut(s) | 1429, 1438, 1601 |
| BstX2I | RGATCY | 1 cut(s) | 1388 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 82, 805, 1614 |
| BstYI | RGATCY | 1 cut(s) | 1388 |
| Bsu15I | ATCGAT | 2 cut(s) | 1546, 1570 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1242 |
| BsuI | GTATCC | 2 cut(s) | 939, 1053 |
| BsuRI | GGCC | 4 cut(s) | 86, 140, 796, 1349 |
| BsuTUI | ATCGAT | 2 cut(s) | 1546, 1570 |
| BtgZI | GCGATG | 1 cut(s) | 46 |
| BtsCI | GGATG | 3 cut(s) | 153, 633, 1545 |
| BtuMI | TCGCGA | 3 cut(s) | 104, 606, 746 |
| Cac8I | GCNNGC | 5 cut(s) | 76, 138, 142, 205, 1146 |
| CaiI | CAGNNNCTG | 2 cut(s) | 769, 1276 |
| CfoI | GCGC | 6 cut(s) | 7, 243, 259, 385, 1030, 1213 |
| Cfr10I | RCCGGY | 2 cut(s) | 136, 1358 |
| Cfr13I | GGNCC | 9 cut(s) | 85, 91, 277, 345, 400, 795, 1107, 1348, 1361 |
| Cfr9I | CCCGGG | 1 cut(s) | 1460 |
| ClaI | ATCGAT | 2 cut(s) | 1546, 1570 |
| CseI | GACGC | 3 cut(s) | 215, 247, 799 |
| Csp6I | GTAC | 5 cut(s) | 328, 433, 586, 646, 1600 |
| CviAII | CATG | 1 cut(s) | 1593 |
| CviQI | GTAC | 5 cut(s) | 328, 433, 586, 646, 1600 |
| DdeI | CTNAG | 2 cut(s) | 810, 1242 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 98, 181 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 98, 181 |
| EaeI | YGGCCR | 1 cut(s) | 138 |
| Eam1104I | CTCTTC | 3 cut(s) | 467, 686, 1209 |
| EarI | CTCTTC | 3 cut(s) | 467, 686, 1209 |
| EciI | GGCGGA | 4 cut(s) | 498, 549, 1274, 1484 |
| Ecl136II | GAGCTC | 2 cut(s) | 393, 519 |
| Eco130I | CCWWGG | 2 cut(s) | 66, 1110 |
| Eco24I | GRGCYC | 3 cut(s) | 395, 521, 1176 |
| Eco31I | GGTCTC | 2 cut(s) | 561, 851 |
| Eco47I | GGWCC | 6 cut(s) | 91, 277, 345, 400, 1107, 1361 |
| Eco53kI | GAGCTC | 2 cut(s) | 393, 519 |
| Eco81I | CCTNAGG | 1 cut(s) | 1242 |
| Eco88I | CYCGRG | 5 cut(s) | 95, 311, 388, 449, 1460 |
| EcoICRI | GAGCTC | 2 cut(s) | 393, 519 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 415 |
| EcoO109I | RGGNCCY | 1 cut(s) | 345 |
| EcoRII | CCWGG | 4 cut(s) | 81, 185, 1363, 1391 |
| EcoT14I | CCWWGG | 2 cut(s) | 66, 1110 |
| EcoT38I | GRGCYC | 3 cut(s) | 395, 521, 1176 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 2 cut(s) | 66, 1110 |
| FaeI | CATG | 1 cut(s) | 1596 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 845, 877 |
| FaqI | GGGAC | 5 cut(s) | 329, 358, 389, 413, 1115 |
| FatI | CATG | 1 cut(s) | 1592 |
| FauI | CCCGC | 4 cut(s) | 356, 496, 530, 1216 |
| FokI | GGATG | 3 cut(s) | 140, 640, 1552 |
| FriOI | GRGCYC | 3 cut(s) | 395, 521, 1176 |
| FspBI | CTAG | 1 cut(s) | 1512 |
| GlaI | GCGC | 6 cut(s) | 6, 242, 258, 384, 1029, 1212 |
| GsuI | CTGGAG | 3 cut(s) | 1097, 1143, 1431 |
| HaeII | RGCGCY | 2 cut(s) | 8, 260 |
| HaeIII | GGCC | 4 cut(s) | 86, 140, 796, 1349 |
| HgaI | GACGC | 3 cut(s) | 215, 247, 799 |
| HhaI | GCGC | 6 cut(s) | 7, 243, 259, 385, 1030, 1213 |
| Hin1I | GRCGYC | 2 cut(s) | 5, 119 |
| Hin1II | CATG | 1 cut(s) | 1596 |
| Hin6I | GCGC | 6 cut(s) | 5, 241, 257, 383, 1028, 1211 |
| HinP1I | GCGC | 6 cut(s) | 5, 241, 257, 383, 1028, 1211 |
| HindIII | AAGCTT | 1 cut(s) | 1398 |
| HinfI | GANTC | 5 cut(s) | 334, 662, 670, 1123, 1444 |
| HphI | GGTGA | 4 cut(s) | 679, 862, 1276, 1420 |
| Hpy166II | GTNNAC | 4 cut(s) | 199, 280, 328, 841 |
| Hpy188I | TCNGA | 7 cut(s) | 32, 48, 339, 367, 444, 1039, 1411 |
| Hpy8I | GTNNAC | 4 cut(s) | 199, 280, 328, 841 |
| Hpy99I | CGWCG | 5 cut(s) | 121, 124, 184, 793, 1039 |
| HpyAV | CCTTC | 4 cut(s) | 847, 1129, 1249, 1459 |
| HpyCH4III | ACNGT | 1 cut(s) | 1562 |
| HpyCH4IV | ACGT | 2 cut(s) | 119, 195 |
| HpyCH4V | TGCA | 5 cut(s) | 763, 962, 1054, 1325, 1454 |
| HpyF3I | CTNAG | 2 cut(s) | 810, 1242 |
| HpySE526I | ACGT | 2 cut(s) | 119, 195 |
| Hsp92I | GRCGYC | 2 cut(s) | 5, 119 |
| Hsp92II | CATG | 1 cut(s) | 1596 |
| HspAI | GCGC | 6 cut(s) | 5, 241, 257, 383, 1028, 1211 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| KflI | GGGWCCC | 1 cut(s) | 345 |
| Kpn2I | TCCGGA | 4 cut(s) | 18, 931, 1045, 1126 |
| KroI | GCCGGC | 1 cut(s) | 136 |
| KroNI | GCCGGC | 1 cut(s) | 138 |
| LguI | GCTCTTC | 2 cut(s) | 467, 1209 |
| LmnI | GCTCC | 7 cut(s) | 32, 733, 1065, 1141, 1153, 1162, 1171 |
| Lsp1109I | GCAGC | 3 cut(s) | 1429, 1438, 1601 |
| LweI | GCATC | 8 cut(s) | 63, 69, 159, 261, 447, 943, 1312, 1588 |
| MaeI | CTAG | 1 cut(s) | 1512 |
| MaeII | ACGT | 2 cut(s) | 119, 195 |
| MaeIII | GTNAC | 3 cut(s) | 191, 706, 1426 |
| MbiI | CCGCTC | 1 cut(s) | 477 |
| MboII | GAAGA | 3 cut(s) | 484, 703, 1196 |
| MfeI | CAATTG | 1 cut(s) | 1608 |
| MflI | RGATCY | 1 cut(s) | 1388 |
| MhlI | GDGCHC | 5 cut(s) | 14, 312, 395, 521, 1176 |
| MluCI | AATT | 6 cut(s) | 547, 571, 696, 738, 1504, 1608 |
| MluI | ACGCGT | 1 cut(s) | 201 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 5 cut(s) | 328, 656, 679, 1132, 1438 |
| MmeI | TCCRAC | 3 cut(s) | 753, 1017, 1536 |
| MroI | TCCGGA | 4 cut(s) | 18, 931, 1045, 1126 |
| MroNI | GCCGGC | 1 cut(s) | 136 |
| MseI | TTAA | 2 cut(s) | 942, 1197 |
| MspA1I | CMGCKG | 3 cut(s) | 868, 1319, 1451 |
| MunI | CAATTG | 1 cut(s) | 1608 |
| MvaI | CCWGG | 4 cut(s) | 83, 187, 1365, 1393 |
| NaeI | GCCGGC | 1 cut(s) | 138 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NciI | CCSGG | 6 cut(s) | 89, 305, 802, 845, 1461, 1462 |
| NgoMIV | GCCGGC | 1 cut(s) | 136 |
| NlaIII | CATG | 1 cut(s) | 1596 |
| NmeAIII | GCCGAG | 3 cut(s) | 33, 591, 1412 |
| NmuCI | GTSAC | 2 cut(s) | 706, 1426 |
| NruI | TCGCGA | 3 cut(s) | 104, 606, 746 |
| NspI | RCATGY | 1 cut(s) | 1596 |
| NspV | TTCGAA | 1 cut(s) | 545 |
| PaeR7I | CTCGAG | 3 cut(s) | 95, 388, 449 |
| PciSI | GCTCTTC | 2 cut(s) | 467, 1209 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 218, 679 |
| PdiI | GCCGGC | 1 cut(s) | 138 |
| Pfl23II | CGTACG | 1 cut(s) | 645 |
| PflFI | GACNNNGTC | 1 cut(s) | 178 |
| Ple19I | CGATCG | 1 cut(s) | 108 |
| PleI | GAGTC | 5 cut(s) | 328, 656, 678, 1131, 1438 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PpsI | GAGTC | 5 cut(s) | 328, 656, 678, 1131, 1438 |
| PpuMI | RGGWCCY | 1 cut(s) | 345 |
| Psp124BI | GAGCTC | 2 cut(s) | 395, 521 |
| Psp5II | RGGWCCY | 1 cut(s) | 345 |
| Psp6I | CCWGG | 4 cut(s) | 81, 185, 1363, 1391 |
| PspGI | CCWGG | 4 cut(s) | 81, 185, 1363, 1391 |
| PspLI | CGTACG | 1 cut(s) | 645 |
| PspPI | GGNCC | 9 cut(s) | 85, 91, 277, 345, 400, 795, 1107, 1348, 1361 |
| PspPPI | RGGWCCY | 1 cut(s) | 345 |
| PspXI | VCTCGAGB | 3 cut(s) | 95, 388, 449 |
| PstI | CTGCAG | 1 cut(s) | 1456 |
| PstNI | CAGNNNCTG | 2 cut(s) | 769, 1276 |
| PsuI | RGATCY | 1 cut(s) | 1388 |
| PsyI | GACNNNGTC | 1 cut(s) | 178 |
| PvuI | CGATCG | 1 cut(s) | 108 |
| PvuII | CAGCTG | 3 cut(s) | 868, 1319, 1451 |
| RruI | TCGCGA | 3 cut(s) | 104, 606, 746 |
| RsaI | GTAC | 5 cut(s) | 329, 434, 587, 647, 1601 |
| RsaNI | GTAC | 5 cut(s) | 328, 433, 586, 646, 1600 |
| SacI | GAGCTC | 2 cut(s) | 395, 521 |
| SapI | GCTCTTC | 2 cut(s) | 467, 1209 |
| SaqAI | TTAA | 2 cut(s) | 942, 1197 |
| Sau96I | GGNCC | 9 cut(s) | 85, 91, 277, 345, 400, 795, 1107, 1348, 1361 |
| ScaI | AGTACT | 1 cut(s) | 1601 |
| SchI | GAGTC | 5 cut(s) | 328, 656, 679, 1132, 1438 |
| SduI | GDGCHC | 5 cut(s) | 14, 312, 395, 521, 1176 |
| SfaNI | GCATC | 8 cut(s) | 63, 69, 159, 261, 447, 943, 1312, 1588 |
| SfcI | CTRYAG | 1 cut(s) | 1452 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| Sfr274I | CTCGAG | 3 cut(s) | 95, 388, 449 |
| SfuI | TTCGAA | 1 cut(s) | 545 |
| SinI | GGWCC | 6 cut(s) | 91, 277, 345, 400, 1107, 1361 |
| SlaI | CTCGAG | 3 cut(s) | 95, 388, 449 |
| SmaI | CCCGGG | 1 cut(s) | 1462 |
| SmlI | CTYRAG | 4 cut(s) | 95, 260, 388, 449 |
| SmoI | CTYRAG | 4 cut(s) | 95, 260, 388, 449 |
| Sse9I | AATT | 6 cut(s) | 547, 571, 696, 738, 1504, 1608 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspMI | CTAG | 1 cut(s) | 1512 |
| SstI | GAGCTC | 2 cut(s) | 395, 521 |
| StyI | CCWWGG | 2 cut(s) | 66, 1110 |
| TaaI | ACNGT | 1 cut(s) | 1562 |
| TaiI | ACGT | 2 cut(s) | 122, 198 |
| TasI | AATT | 6 cut(s) | 547, 571, 696, 738, 1504, 1608 |
| TatI | WGTACW | 2 cut(s) | 432, 1599 |
| TauI | GCSGC | 7 cut(s) | 480, 483, 492, 565, 796, 971, 1237 |
| Tru1I | TTAA | 2 cut(s) | 942, 1197 |
| Tru9I | TTAA | 2 cut(s) | 942, 1197 |
| TseFI | GTSAC | 2 cut(s) | 706, 1426 |
| TseI | GCWGC | 3 cut(s) | 1417, 1451, 1589 |
| Tsp45I | GTSAC | 2 cut(s) | 706, 1426 |
| TspDTI | ATGAA | 4 cut(s) | 627, 671, 740, 1202 |
| TspGWI | ACGGA | 1 cut(s) | 603 |
| TspMI | CCCGGG | 1 cut(s) | 1460 |
| Tth111I | GACNNNGTC | 1 cut(s) | 178 |
| VpaK11BI | GGWCC | 6 cut(s) | 91, 277, 345, 400, 1107, 1361 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 415 |
| XapI | RAATTY | 2 cut(s) | 547, 738 |
| XceI | RCATGY | 1 cut(s) | 1596 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1614 |
| XhoI | CTCGAG | 3 cut(s) | 95, 388, 449 |
| XmaI | CCCGGG | 1 cut(s) | 1460 |
| XspI | CTAG | 1 cut(s) | 1512 |
| ZraI | GACGTC | 1 cut(s) | 120 |
| ZrmI | AGTACT | 1 cut(s) | 1601 |