pycom15g14220

G-patch domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0012311
Physical Location & Seq
Reverse (-)
9678469 .. 9683144
4676 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2238 bp
ATGGCTGGAGGCAGAGGAAGAAGAAGACCCAACAGCAACGACAGCAGCAACTTAAATTGGAGCAGCGGTAGGAGAAGAGCATCGCCATCGTCGTCGTCAAAATCCAAATTTCGAGGAGGTCTGCTCGTGGAGGGCGGGAAAAATCCGAGTTCGAGCAACAAATCTGCGACGAAATCTGTAGCAAAAGCAGCTTCTGGGTCGAAAAGTGATTCTCGGAGATCTAATGTTACTGCTATAGGGTACCAATACCCTTCTGTTGAATTTCAGGAGGGTTTCTATTCAGAATTACGCAATGGCGGTGATGCAGGCAAAGATATGTATGAGTCGTGCCCCTTGGTTTTAGCTGATTACAAGGATACCCAAATTTTAGCTCATGGGGACCAAACACAACCGTCAAGCCCCAATGAAGTGGAATTTACTTATCACTACGGTTCAAGTTTTGTGTTAGGTGAAAGCTCTCATAGAGGGCTAGGGTTCTCTGATGAACTTGAGGAAACCCCAAGTGATGTTGAAGATTCCTCAAAGCAAATGGAAGAGCCAGAAGATTCATGTTTTAACTTGCAATCTTCTGAGAAACATATGGATGCCAATAACGGGATGGATTGTGAAGTTGGCGATGATGAGATGGCTGAAGAGATGACAACAGAGATGTTGTCGCCCAAGAAGAACTCAGGCTTTTTGTCAGTTGGTGGCATGAGATTATACACCCAAGATATTTCTGATGAAGAAAGTGAAGAAGATGAAAATGGAGAGTCACTGTATGAAGGAAGCTCAGGCTCTTCTGAGTCTGGAGAACGACTTGGATCCTCTGAAAGTGAAGACTCTGAAGACTTGTCTGATAGTGATTCAGATGTAGATGACGAGGTTGCAGACGATTATTTAGTGGGAATTGGTGGTAGTTACAACATCTTAAGTTCCAAATTTTTGGTAGAACAGGATTTGGATGAGCCGGATAAGAATAGCTCTTTGAGGAAGGGTTTTGATGAGACTTTGCAGAAGTTGGGCGGAATTGCTCTTCAGGATGCATCTAGGGAGTATGGTAGGAAGAAGGTCCAGTCACAAAAGAAATACAATGTGACTGAAAGACATGCTCGGTCTTTGGCTATAGATGACCTAATGCTTGTAAAGGATACAAGAAATTATTCCAAAAAGAAACCTGTTGCCAAGTTTCCTCAGTCTTGGCCTGCAGAAGCTCAAAGGAGTAAATTCTCAAGACATTTTCCTGGGACAAAAAAGAAACATCGTAAAGAAATGATGGCTGTAAAGCGTAAGGAGAGAATGCTGCGCCGAGGCGTTGATCTTGAGCAAATAAATCTGAAAATGGAGCAAATTGTTTTGGATGGAGTAGATATGTTTTCTTTTCAGCCTATGCATTCCCGGGATTGTTCCCAGGTTCAGCGATTAGCCGCAATGTATCGCCTGAGGAGTTCCTGCCAAGGATCTGGCAAGAAGAGATTTGTGACAGTGATGCAGACACAACACACTGGCATGCCATCTGCAAGTGATAGACTTCGTCTTGAAAAGCTGATTGGAGCTGACATGGAGGATGCTGATTTCTCTGTTGTTGAGCCTGGTAGAGACAAAAACAGGCCAAGGAACATTGGAAAAGGAATTGATTTTAGGACACCGGAATCTAAACAATCCAGCCAAAGAAAGACACCGAAGACCTCAGCCAAACATGGCAGTGGGAATATGGATTCATATGCTAATACACCAGTATCATTTGTGTCAAGTGGCGTAATGCAATCAGCGGCTGAGAGTTTAACTGTTGACTCAATAGAAGCAAGTAAAAACAAGGTTGCTGCTGAGTCAACTGAATATCGTTCCTTTGAGCTACACACTAAGGGTTTTGGATCAAAAATGCTGGCTAAAATGGGATACATCGAAGGTGGCTTAGGAAAAGATGGACAAGGTATGGCTGCACCCATCGAAGTGATCCAACGGCCTAAATCACTTGGCTTGGGTGTGGAATTCTCCACCCCCGTTGAGATCCCAGTCGGTAAAACACCCCCAGCAAAGAATATCCCGGTAAAAAGAGGATCTCAGGCTCAGAGTTCTCAAACTCAGAGTGAAAGAGTTGGATATTTCGAAAAGCATACCAAAGGATTTGGATCGAAGATGATGGCGAAAATGGGTTTTGTTGAAGGCATGGGGTTGGGGAAAGATTCACAAGGCATTGTCAACCCTCTGGCTGCAGTCAGGCTACCGAAGTCGAGGGGATTAGGTGCCTCAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-patch R3H

Protein Analysis

746

Amino Acids

81.56

Weight (kDa)

6.28

Isoelectric Point (pI)

60.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
R3H PF01424 434 - 490 7.5e-09 R3H domain
G-patch PF01585 614 - 657 1.8e-12 G-patch domain
G-patch_2 PF12656 616 - 657 1.2e-06 G-patch domain
G-patch PF01585 700 - 743 1.5e-16 G-patch domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012311)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09850
fragaria_vesca FvH4_1g01590
malus_domestica MD02G1012700.v1.1 MD15G1158500.v1.1
prunus_persica Prupe.7G253700_v2.0.a1 Prupe.7G253700_v2.0.a1
pyrus_communis pycom02g01190 pycom15g14220
rosa_chinensis RchiOBHm_Chr2g0086551
rosa_laevigata RLG00000015766
rosa_multiflora Rmu_sc0008445.1_g000002 Rmu_ssc0000449.1_g000001
rosa_roxburghii Rroxscaffold_2G00154450
rosa_rugosa Rorug01G0467800
rosa_samantha Rh2AG018800 Rh2BG018400 Rh2CG019300 Rh2DG020100
rosa_wichuraiana Rw2G001580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 240
AccB1I GGYRCC 2 cut(s) 240, 2225
AciI CCGC 6 cut(s) 66, 135, 297, 1005, 1407, 1751
AclWI GGATC 8 cut(s) 798, 811, 1447, 1861, 1930, 1984, 2047, 2119
AcsI RAATTY 7 cut(s) 107, 260, 363, 413, 920, 1205, 1970
AcuI CTGAAG 3 cut(s) 651, 846, 1001
AfaI GTAC 1 cut(s) 242
AfiI CCNNNNNNNGG 1 cut(s) 594
AflII CTTAAG 1 cut(s) 910
AgsI TTSAA 5 cut(s) 260, 435, 512, 1520, 2144
AjnI CCWGG 3 cut(s) 1222, 1389, 1570
AjuI GAANNNNNNNTTGG 2 cut(s) 1512, 1544
Alw26I GTCTC 2 cut(s) 980, 1572
AlwI GGATC 8 cut(s) 798, 811, 1447, 1861, 1930, 1984, 2047, 2119
AlwNI CAGNNNCTG 2 cut(s) 194, 1754
Ama87I CYCGRG 1 cut(s) 1377
AoxI GGCC 3 cut(s) 1181, 1589, 1943
ApeKI GCWGC 7 cut(s) 45, 63, 188, 1282, 1802, 1919, 2192
ApoI RAATTY 7 cut(s) 107, 260, 363, 413, 920, 1205, 1970
Asp700I GAANNNNTTC 1 cut(s) 1141
Asp718I GGTACC 1 cut(s) 240
AspLEI GCGC 1 cut(s) 1287
AspS9I GGNCC 2 cut(s) 379, 1051
AsuC2I CCSGG 3 cut(s) 1378, 1379, 2027
AsuHPI GGTGA 2 cut(s) 311, 461
AsuII TTCGAA 1 cut(s) 2088
AvaI CYCGRG 1 cut(s) 1377
AvaII GGWCC 2 cut(s) 379, 1051
AxyI CCTNAGG 2 cut(s) 1421, 2230
BaeGI GKGCMC 1 cut(s) 332
BaeI ACNNNNGTAYC 2 cut(s) 1701, 1734
BamHI GGATCC 1 cut(s) 803
BanI GGYRCC 2 cut(s) 240, 2225
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 4 cut(s) 31, 825, 834, 1670
BbvCI CCTCAGC 1 cut(s) 1669
BbvI GCAGC 7 cut(s) 57, 75, 200, 1269, 1789, 1906, 2179
BccI CCATC 9 cut(s) 94, 592, 619, 1249, 1334, 1501, 1898, 1934, 2116
BceAI ACGGC 1 cut(s) 1958
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BciT130I CCWGG 3 cut(s) 1224, 1391, 1572
BciVI GTATCC 3 cut(s) 349, 1123, 1871
BcnI CCSGG 3 cut(s) 1378, 1379, 2027
BcoDI GTCTC 2 cut(s) 980, 1572
BfaI CTAG 2 cut(s) 470, 1029
BfmI CTRYAG 5 cut(s) 177, 234, 1104, 1185, 2193
BfrI CTTAAG 1 cut(s) 910
BfuI GTATCC 3 cut(s) 349, 1123, 1871
BglII AGATCT 1 cut(s) 218
BisI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
BlsI GCNGC 9 cut(s) 47, 65, 190, 1284, 1408, 1753, 1804, 1921, 2194
Bme1390I CCNGG 6 cut(s) 1224, 1378, 1379, 1391, 1572, 2027
Bme18I GGWCC 2 cut(s) 379, 1051
BmeT110I CYCGRG 1 cut(s) 1377
BmgT120I GGNCC 2 cut(s) 379, 1051
BmiI GGNNCC 4 cut(s) 242, 380, 805, 2227
BmrFI CCNGG 6 cut(s) 1224, 1378, 1379, 1391, 1572, 2027
BmrI ACTGGG 1 cut(s) 1988
BmsI GCATC 7 cut(s) 89, 292, 574, 1012, 1034, 1458, 1537
BmuI ACTGGG 1 cut(s) 1988
BpiI GAAGAC 4 cut(s) 31, 825, 834, 1670
BplI GAGNNNNNCTC 2 cut(s) 108, 140
BpmI CTGGAG 2 cut(s) 27, 810
Bpu10I CCTNAGC 3 cut(s) 772, 1669, 1894
Bpu14I TTCGAA 1 cut(s) 2088
BpuEI CTTGAG 3 cut(s) 509, 1195, 1322
BpuMI CCSGG 3 cut(s) 1378, 1379, 2027
BsaBI GATNNNNATC 1 cut(s) 2110
BsaJI CCNNGG 7 cut(s) 333, 1223, 1288, 1377, 1389, 1435, 1592
BsaWI WCCGGW 1 cut(s) 1627
BsaXI ACNNNNNCTCC 2 cut(s) 52, 82
Bsc4I CCNNNNNNNGG 1 cut(s) 594
Bse1I ACTGG 4 cut(s) 1054, 1489, 1715, 1994
Bse21I CCTNAGG 2 cut(s) 1421, 2230
Bse3DI GCAATG 2 cut(s) 298, 1416
Bse8I GATNNNNATC 1 cut(s) 2110
BseBI CCWGG 3 cut(s) 1224, 1391, 1572
BseDI CCNNGG 7 cut(s) 333, 1223, 1288, 1377, 1389, 1435, 1592
BseGI GGATG 6 cut(s) 589, 603, 949, 1027, 1345, 1552
BseJI GATNNNNATC 1 cut(s) 2110
BseLI CCNNNNNNNGG 1 cut(s) 594
BseMI GCAATG 2 cut(s) 298, 1416
BseNI ACTGG 4 cut(s) 1054, 1489, 1715, 1994
BseRI GAGGAG 2 cut(s) 129, 1438
BseSI GKGCMC 1 cut(s) 332
BseXI GCAGC 7 cut(s) 57, 75, 200, 1269, 1789, 1906, 2179
BseYI CCCAGC 1 cut(s) 2011
BsgI GTGCAG 1 cut(s) 1905
BshFI GGCC 3 cut(s) 1183, 1591, 1945
BshNI GGYRCC 2 cut(s) 240, 2225
BsiHKCI CYCGRG 1 cut(s) 1377
BsiSI CCGG 4 cut(s) 950, 1378, 1628, 2027
BslFI GGGAC 2 cut(s) 392, 1240
BslI CCNNNNNNNGG 1 cut(s) 594
BsmAI GTCTC 2 cut(s) 980, 1572
BsmFI GGGAC 2 cut(s) 392, 1240
BsmI GAATGC 2 cut(s) 1284, 1372
BsnI GGCC 3 cut(s) 1183, 1591, 1945
BsoBI CYCGRG 1 cut(s) 1377
Bsp119I TTCGAA 1 cut(s) 2088
Bsp1286I GDGCHC 1 cut(s) 332
Bsp143I GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
BspACI CCGC 6 cut(s) 66, 135, 297, 1005, 1407, 1751
BspANI GGCC 3 cut(s) 1183, 1591, 1945
BspLI GGNNCC 4 cut(s) 242, 380, 805, 2227
BspMAI CTGCAG 2 cut(s) 1189, 2197
BspPI GGATC 8 cut(s) 798, 811, 1447, 1861, 1930, 1984, 2047, 2119
BspQI GCTCTTC 4 cut(s) 70, 528, 784, 1020
BspT104I TTCGAA 1 cut(s) 2088
BspT107I GGYRCC 2 cut(s) 240, 2225
BspTI CTTAAG 1 cut(s) 910
BsrDI GCAATG 2 cut(s) 298, 1416
BsrI ACTGG 4 cut(s) 1054, 1489, 1715, 1994
BssECI CCNNGG 7 cut(s) 333, 1223, 1288, 1377, 1389, 1435, 1592
BssMI GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 3 cut(s) 333, 1435, 1592
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 3 cut(s) 1224, 1391, 1572
Bst4CI ACNGT 5 cut(s) 393, 431, 759, 1465, 1768
Bst6I CTCTTC 6 cut(s) 70, 528, 627, 784, 1020, 1445
BstAFI CTTAAG 1 cut(s) 910
BstBI TTCGAA 1 cut(s) 2088
BstC8I GCNNGC 4 cut(s) 307, 1185, 1490, 1866
BstF5I GGATG 6 cut(s) 589, 603, 949, 1027, 1345, 1552
BstHHI GCGC 1 cut(s) 1287
BstKTI GATC 9 cut(s) 221, 806, 1300, 1442, 1856, 1938, 1992, 2042, 2114
BstMAI GTCTC 2 cut(s) 980, 1572
BstMBI GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
BstMWI GCNNNNNNNGC 2 cut(s) 42, 188
BstNI CCWGG 3 cut(s) 1224, 1391, 1572
BstNSI RCATGY 2 cut(s) 1091, 1492
BstSCI CCNGG 6 cut(s) 1222, 1376, 1377, 1389, 1570, 2025
BstSFI CTRYAG 5 cut(s) 177, 234, 1104, 1185, 2193
BstSLI GKGCMC 1 cut(s) 332
BstV1I GCAGC 7 cut(s) 57, 75, 200, 1269, 1789, 1906, 2179
BstV2I GAAGAC 4 cut(s) 31, 825, 834, 1670
BstX2I RGATCY 5 cut(s) 218, 803, 1439, 1989, 2039
BstXI CCANNNNNNTGG 3 cut(s) 409, 925, 1442
BstYI RGATCY 5 cut(s) 218, 803, 1439, 1989, 2039
Bsu36I CCTNAGG 2 cut(s) 1421, 2230
BsuI GTATCC 3 cut(s) 349, 1123, 1871
BsuRI GGCC 3 cut(s) 1183, 1591, 1945
BtgZI GCGATG 2 cut(s) 66, 630
BtsCI GGATG 6 cut(s) 589, 603, 949, 1027, 1345, 1552
BtsI GCAGTG 1 cut(s) 1690
BtsIMutI CAGTG 4 cut(s) 755, 1470, 1482, 1690
Cac8I GCNNGC 4 cut(s) 307, 1185, 1490, 1866
CaiI CAGNNNCTG 2 cut(s) 194, 1754
CfoI GCGC 1 cut(s) 1287
Cfr13I GGNCC 2 cut(s) 379, 1051
Cfr9I CCCGGG 1 cut(s) 1377
Csp6I GTAC 1 cut(s) 241
CspCI CAANNNNNGTGG 2 cut(s) 1966, 2001
CviAII CATG 8 cut(s) 374, 549, 694, 1088, 1489, 1540, 1679, 2149
CviQI GTAC 1 cut(s) 241
DpnI GATC 9 cut(s) 220, 805, 1299, 1441, 1855, 1937, 1991, 2041, 2113
DpnII GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
Eam1104I CTCTTC 6 cut(s) 70, 528, 627, 784, 1020, 1445
EarI CTCTTC 6 cut(s) 70, 528, 627, 784, 1020, 1445
EciI GGCGGA 1 cut(s) 1020
Eco130I CCWWGG 3 cut(s) 333, 1435, 1592
Eco47I GGWCC 2 cut(s) 379, 1051
Eco57I CTGAAG 3 cut(s) 651, 846, 1001
Eco81I CCTNAGG 2 cut(s) 1421, 2230
Eco88I CYCGRG 1 cut(s) 1377
EcoRI GAATTC 1 cut(s) 1970
EcoRII CCWGG 3 cut(s) 1222, 1389, 1570
EcoT14I CCWWGG 3 cut(s) 333, 1435, 1592
EcoT22I ATGCAT 2 cut(s) 1027, 1374
ErhI CCWWGG 3 cut(s) 333, 1435, 1592
FaeI CATG 8 cut(s) 377, 552, 697, 1091, 1492, 1543, 1682, 2152
FaqI GGGAC 2 cut(s) 392, 1240
FatI CATG 8 cut(s) 373, 548, 693, 1087, 1488, 1539, 1678, 2148
FauI CCCGC 1 cut(s) 128
FauNDI CATATG 2 cut(s) 579, 1702
Fnu4HI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
FokI GGATG 6 cut(s) 596, 610, 956, 1034, 1352, 1559
Fsp4HI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
FspBI CTAG 2 cut(s) 470, 1029
GlaI GCGC 1 cut(s) 1286
GluI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
GsaI CCCAGC 1 cut(s) 2015
GsuI CTGGAG 2 cut(s) 27, 810
HaeIII GGCC 3 cut(s) 1183, 1591, 1945
HapII CCGG 4 cut(s) 950, 1378, 1628, 2027
HhaI GCGC 1 cut(s) 1287
Hin1II CATG 8 cut(s) 377, 552, 697, 1091, 1492, 1543, 1682, 2152
Hin6I GCGC 1 cut(s) 1285
HinP1I GCGC 1 cut(s) 1285
HincII GTYRAC 3 cut(s) 1771, 1812, 2182
HindII GTYRAC 3 cut(s) 1771, 1812, 2182
HpaII CCGG 4 cut(s) 950, 1378, 1628, 2027
HphI GGTGA 2 cut(s) 311, 461
Hpy166II GTNNAC 3 cut(s) 1771, 1812, 2182
Hpy188III TCNNGA 6 cut(s) 266, 789, 1019, 1212, 1301, 1517
Hpy8I GTNNAC 3 cut(s) 1771, 1812, 2182
Hpy99I CGWCG 3 cut(s) 94, 97, 172
HpyAV CCTTC 6 cut(s) 261, 758, 967, 1042, 1880, 2138
HpyCH4III ACNGT 5 cut(s) 393, 431, 759, 1465, 1768
HpyF10VI GCNNNNNNNGC 2 cut(s) 42, 188
Hsp92II CATG 8 cut(s) 377, 552, 697, 1091, 1492, 1543, 1682, 2152
HspAI GCGC 1 cut(s) 1285
KpnI GGTACC 1 cut(s) 244
Kzo9I GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
LguI GCTCTTC 4 cut(s) 70, 528, 784, 1020
LmnI GCTCC 3 cut(s) 60, 1324, 1532
Lsp1109I GCAGC 7 cut(s) 57, 75, 200, 1269, 1789, 1906, 2179
LweI GCATC 7 cut(s) 89, 292, 574, 1012, 1034, 1458, 1537
MaeI CTAG 2 cut(s) 470, 1029
MaeIII GTNAC 6 cut(s) 226, 753, 899, 1056, 1075, 1459
MalI GATC 9 cut(s) 220, 805, 1299, 1441, 1855, 1937, 1991, 2041, 2113
MboI GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
MflI RGATCY 5 cut(s) 218, 803, 1439, 1989, 2039
MhlI GDGCHC 1 cut(s) 332
MlyI GAGTC 6 cut(s) 332, 761, 794, 815, 1766, 1817
MmeI TCCRAC 2 cut(s) 1963, 2059
Mph1103I ATGCAT 2 cut(s) 1027, 1374
MroXI GAANNNNTTC 1 cut(s) 1141
MseI TTAA 5 cut(s) 53, 555, 911, 1763, 2236
MslI CAYNNNNRTG 4 cut(s) 582, 1487, 1683, 1931
MspA1I CMGCKG 2 cut(s) 66, 1751
MspCI CTTAAG 1 cut(s) 910
MspI CCGG 4 cut(s) 950, 1378, 1628, 2027
MspR9I CCNGG 6 cut(s) 1224, 1378, 1379, 1391, 1572, 2027
Mva1269I GAATGC 2 cut(s) 1284, 1372
MvaI CCWGG 3 cut(s) 1224, 1391, 1572
MwoI GCNNNNNNNGC 2 cut(s) 42, 188
NciI CCSGG 3 cut(s) 1378, 1379, 2027
NdeI CATATG 2 cut(s) 579, 1702
NdeII GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
NlaIII CATG 8 cut(s) 377, 552, 697, 1091, 1492, 1543, 1682, 2152
NlaIV GGNNCC 4 cut(s) 242, 380, 805, 2227
NmeAIII GCCGAG 1 cut(s) 1313
NmuCI GTSAC 4 cut(s) 753, 1056, 1075, 1459
NsiI ATGCAT 2 cut(s) 1027, 1374
NspI RCATGY 2 cut(s) 1091, 1492
NspV TTCGAA 1 cut(s) 2088
PaeI GCATGC 1 cut(s) 1492
PciSI GCTCTTC 4 cut(s) 70, 528, 784, 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 89
PctI GAATGC 2 cut(s) 1284, 1372
PdmI GAANNNNTTC 1 cut(s) 1141
PfeI GAWTC 7 cut(s) 209, 515, 545, 845, 1631, 1697, 2165
PflFI GACNNNGTC 1 cut(s) 1512
PkrI GCNGC 9 cut(s) 47, 65, 190, 1284, 1408, 1753, 1804, 1921, 2194
PleI GAGTC 6 cut(s) 331, 760, 793, 815, 1766, 1816
PpsI GAGTC 6 cut(s) 331, 760, 793, 815, 1766, 1816
Psp6I CCWGG 3 cut(s) 1222, 1389, 1570
PspFI CCCAGC 1 cut(s) 2011
PspGI CCWGG 3 cut(s) 1222, 1389, 1570
PspN4I GGNNCC 4 cut(s) 242, 380, 805, 2227
PspPI GGNCC 2 cut(s) 379, 1051
PstI CTGCAG 2 cut(s) 1189, 2197
PstNI CAGNNNCTG 2 cut(s) 194, 1754
PsuI RGATCY 5 cut(s) 218, 803, 1439, 1989, 2039
PsyI GACNNNGTC 1 cut(s) 1512
RsaI GTAC 1 cut(s) 242
RsaNI GTAC 1 cut(s) 241
RseI CAYNNNNRTG 4 cut(s) 582, 1487, 1683, 1931
SapI GCTCTTC 4 cut(s) 70, 528, 784, 1020
SaqAI TTAA 5 cut(s) 53, 555, 911, 1763, 2236
SatI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
Sau3AI GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
Sau96I GGNCC 2 cut(s) 379, 1051
SchI GAGTC 6 cut(s) 332, 761, 794, 815, 1766, 1817
ScrFI CCNGG 6 cut(s) 1224, 1378, 1379, 1391, 1572, 2027
SduI GDGCHC 1 cut(s) 332
SfaNI GCATC 7 cut(s) 89, 292, 574, 1012, 1034, 1458, 1537
SfcI CTRYAG 5 cut(s) 177, 234, 1104, 1185, 2193
SfuI TTCGAA 1 cut(s) 2088
SinI GGWCC 2 cut(s) 379, 1051
SmaI CCCGGG 1 cut(s) 1379
SmiMI CAYNNNNRTG 4 cut(s) 582, 1487, 1683, 1931
SmlI CTYRAG 4 cut(s) 488, 910, 1210, 1301
SmoI CTYRAG 4 cut(s) 488, 910, 1210, 1301
SphI GCATGC 1 cut(s) 1492
SsiI CCGC 6 cut(s) 66, 135, 297, 1005, 1407, 1751
SspMI CTAG 2 cut(s) 470, 1029
StyD4I CCNGG 6 cut(s) 1222, 1376, 1377, 1389, 1570, 2025
StyI CCWWGG 3 cut(s) 333, 1435, 1592
TaaI ACNGT 5 cut(s) 393, 431, 759, 1465, 1768
TaqI TCGA 8 cut(s) 112, 152, 200, 1884, 1929, 2088, 2114, 2213
TaqII GACCGA 1 cut(s) 1083
TauI GCSGC 2 cut(s) 1409, 1754
TfiI GAWTC 7 cut(s) 209, 515, 545, 845, 1631, 1697, 2165
Tru1I TTAA 5 cut(s) 53, 555, 911, 1763, 2236
Tru9I TTAA 5 cut(s) 53, 555, 911, 1763, 2236
TscAI CASTG 4 cut(s) 762, 1470, 1489, 1690
TseFI GTSAC 4 cut(s) 753, 1056, 1075, 1459
TseI GCWGC 7 cut(s) 45, 63, 188, 1282, 1802, 1919, 2192
Tsp45I GTSAC 4 cut(s) 753, 1056, 1075, 1459
TspDTI ATGAA 7 cut(s) 420, 498, 537, 738, 756, 777, 1689
TspMI CCCGGG 1 cut(s) 1377
TspRI CASTG 4 cut(s) 762, 1470, 1489, 1690
Tth111I GACNNNGTC 1 cut(s) 1512
Vha464I CTTAAG 1 cut(s) 910
VpaK11BI GGWCC 2 cut(s) 379, 1051
XapI RAATTY 7 cut(s) 107, 260, 363, 413, 920, 1205, 1970
XceI RCATGY 2 cut(s) 1091, 1492
XcmI CCANNNNNNNNNTGG 1 cut(s) 595
XmaI CCCGGG 1 cut(s) 1377
XmnI GAANNNNTTC 1 cut(s) 1141
XspI CTAG 2 cut(s) 470, 1029
Zsp2I ATGCAT 2 cut(s) 1027, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.