CCR4-NOT transcription complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G35430 |
| fragaria_vesca | FvH4_1g02580 FvH4_1g02580 |
| malus_domestica | MD02G1023300.v1.1 MD15G1166400.v1.1 |
| prunus_persica | Prupe.7G248800_v2.0.a1 Prupe.7G248800_v2.0.a1 Prupe.7G248800_v2.0.a1 |
| pyrus_communis | pycom02g02030 pycom15g14870 |
| rosa_chinensis | RchiOBHm_Chr2g0087611 |
| rosa_laevigata | RLG00000015886 |
| rosa_multiflora | Rmu_sc0002299.1_g000034 |
| rosa_roxburghii | Rroxscaffold_2G00153370 |
| rosa_rugosa | Rorug01G0477000 Rorug01G0477100 |
| rosa_samantha | Rh2AG030700 Rh2BG030400 Rh2CG030800 Rh2DG030700 |
| rosa_wichuraiana | Rw2G002430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 74, 2110 |
| Acc16I | TGCGCA | 1 cut(s) | 102 |
| Acc36I | ACCTGC | 1 cut(s) | 697 |
| AccII | CGCG | 1 cut(s) | 1339 |
| AccIII | TCCGGA | 1 cut(s) | 1227 |
| AciI | CCGC | 7 cut(s) | 153, 218, 449, 503, 710, 2049, 2487 |
| AclWI | GGATC | 5 cut(s) | 182, 239, 758, 2215, 2421 |
| AcsI | RAATTY | 6 cut(s) | 416, 1669, 1732, 1762, 2019, 2296 |
| AcuI | CTGAAG | 3 cut(s) | 39, 926, 2256 |
| AcvI | CACGTG | 1 cut(s) | 1004 |
| AfaI | GTAC | 5 cut(s) | 1307, 2136, 2291, 2312, 2481 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1608 |
| AflII | CTTAAG | 1 cut(s) | 911 |
| AjnI | CCWGG | 2 cut(s) | 1932, 2334 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1520, 1552 |
| Alw21I | GWGCWC | 1 cut(s) | 97 |
| Alw26I | GTCTC | 3 cut(s) | 21, 782, 1622 |
| AlwI | GGATC | 5 cut(s) | 182, 239, 758, 2215, 2421 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 940 |
| Aor13HI | TCCGGA | 1 cut(s) | 1227 |
| AoxI | GGCC | 6 cut(s) | 1238, 1353, 1376, 1971, 2178, 2421 |
| ApoI | RAATTY | 6 cut(s) | 416, 1669, 1732, 1762, 2019, 2296 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 473, 505 |
| AseI | ATTAAT | 1 cut(s) | 1433 |
| AspA2I | CCTAGG | 1 cut(s) | 2032 |
| AspLEI | GCGC | 3 cut(s) | 103, 1339, 1341 |
| AspS9I | GGNCC | 5 cut(s) | 363, 521, 746, 1234, 2178 |
| AsuHPI | GGTGA | 3 cut(s) | 1568, 2223, 2336 |
| AvaII | GGWCC | 4 cut(s) | 363, 521, 746, 1234 |
| AvrII | CCTAGG | 1 cut(s) | 2032 |
| AxyI | CCTNAGG | 1 cut(s) | 783 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2463, 2496 |
| BanII | GRGCYC | 1 cut(s) | 97 |
| BauI | CACGAG | 2 cut(s) | 949, 1056 |
| BbrPI | CACGTG | 1 cut(s) | 1004 |
| BbsI | GAAGAC | 2 cut(s) | 3, 2244 |
| Bbv12I | GWGCWC | 1 cut(s) | 97 |
| BceAI | ACGGC | 2 cut(s) | 45, 59 |
| BciT130I | CCWGG | 2 cut(s) | 1934, 2336 |
| BclI | TGATCA | 2 cut(s) | 1131, 1908 |
| BcoDI | GTCTC | 3 cut(s) | 21, 782, 1622 |
| BfaI | CTAG | 5 cut(s) | 792, 867, 1098, 1145, 2033 |
| BfmI | CTRYAG | 5 cut(s) | 312, 525, 1785, 2400, 2461 |
| BfrI | CTTAAG | 1 cut(s) | 911 |
| BfuAI | ACCTGC | 1 cut(s) | 697 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2054 |
| BglII | AGATCT | 1 cut(s) | 1988 |
| BlnI | CCTAGG | 1 cut(s) | 2032 |
| BmcAI | AGTACT | 1 cut(s) | 1307 |
| Bme1390I | CCNGG | 2 cut(s) | 1934, 2336 |
| Bme18I | GGWCC | 4 cut(s) | 363, 521, 746, 1234 |
| BmgT120I | GGNCC | 5 cut(s) | 363, 521, 746, 1234, 2178 |
| BmiI | GGNNCC | 3 cut(s) | 364, 461, 780 |
| BmrFI | CCNGG | 2 cut(s) | 1934, 2336 |
| BmrI | ACTGGG | 1 cut(s) | 692 |
| BmsI | GCATC | 7 cut(s) | 97, 580, 906, 1103, 1460, 1781, 2074 |
| BmuI | ACTGGG | 1 cut(s) | 692 |
| BpiI | GAAGAC | 2 cut(s) | 3, 2244 |
| BpmI | CTGGAG | 1 cut(s) | 363 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1587 |
| BpuEI | CTTGAG | 3 cut(s) | 155, 2246, 2402 |
| BsaAI | YACGTR | 2 cut(s) | 1004, 2293 |
| BsaBI | GATNNNNATC | 1 cut(s) | 762 |
| BsaJI | CCNNGG | 4 cut(s) | 63, 1603, 1767, 2032 |
| BsaWI | WCCGGW | 2 cut(s) | 874, 1227 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 336, 366 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1608 |
| Bse118I | RCCGGY | 3 cut(s) | 1236, 1355, 2423 |
| Bse1I | ACTGG | 4 cut(s) | 124, 346, 698, 2344 |
| Bse21I | CCTNAGG | 1 cut(s) | 783 |
| Bse3DI | GCAATG | 4 cut(s) | 387, 444, 600, 1205 |
| Bse8I | GATNNNNATC | 1 cut(s) | 762 |
| BseAI | TCCGGA | 1 cut(s) | 1227 |
| BseBI | CCWGG | 2 cut(s) | 1934, 2336 |
| BseDI | CCNNGG | 4 cut(s) | 63, 1603, 1767, 2032 |
| BseGI | GGATG | 6 cut(s) | 112, 418, 574, 829, 1822, 2089 |
| BseJI | GATNNNNATC | 1 cut(s) | 762 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1608 |
| BseMI | GCAATG | 4 cut(s) | 387, 444, 600, 1205 |
| BseMII | CTCAG | 5 cut(s) | 774, 1392, 1608, 1641, 1859 |
| BseNI | ACTGG | 4 cut(s) | 124, 346, 698, 2344 |
| BsePI | GCGCGC | 1 cut(s) | 1337 |
| BseRI | GAGGAG | 2 cut(s) | 800, 1019 |
| BseYI | CCCAGC | 1 cut(s) | 1041 |
| BsgI | GTGCAG | 1 cut(s) | 1877 |
| Bsh1236I | CGCG | 1 cut(s) | 1339 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2428 |
| BshFI | GGCC | 6 cut(s) | 1240, 1355, 1378, 1973, 2180, 2423 |
| BsiEI | CGRYCG | 1 cut(s) | 2428 |
| BsiHKAI | GWGCWC | 1 cut(s) | 97 |
| BsiSI | CCGG | 5 cut(s) | 875, 1228, 1237, 1356, 2424 |
| BslFI | GGGAC | 4 cut(s) | 56, 399, 1024, 1585 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1608 |
| BsmAI | GTCTC | 3 cut(s) | 21, 782, 1622 |
| BsmBI | CGTCTC | 1 cut(s) | 21 |
| BsmFI | GGGAC | 4 cut(s) | 56, 399, 1024, 1585 |
| BsmI | GAATGC | 3 cut(s) | 775, 991, 1630 |
| BsnI | GGCC | 6 cut(s) | 1240, 1355, 1378, 1973, 2180, 2423 |
| Bsp1286I | GDGCHC | 1 cut(s) | 97 |
| Bsp13I | TCCGGA | 1 cut(s) | 1227 |
| BspACI | CCGC | 7 cut(s) | 153, 218, 449, 503, 710, 2049, 2487 |
| BspANI | GGCC | 6 cut(s) | 1240, 1355, 1378, 1973, 2180, 2423 |
| BspCNI | CTCAG | 5 cut(s) | 775, 1393, 1607, 1642, 1858 |
| BspEI | TCCGGA | 1 cut(s) | 1227 |
| BspFNI | CGCG | 1 cut(s) | 1339 |
| BspHI | TCATGA | 1 cut(s) | 469 |
| BspLI | GGNNCC | 3 cut(s) | 364, 461, 780 |
| BspMAI | CTGCAG | 2 cut(s) | 316, 2404 |
| BspMI | ACCTGC | 1 cut(s) | 697 |
| BspPI | GGATC | 5 cut(s) | 182, 239, 758, 2215, 2421 |
| BspTI | CTTAAG | 1 cut(s) | 911 |
| BsrDI | GCAATG | 4 cut(s) | 387, 444, 600, 1205 |
| BsrFI | RCCGGY | 3 cut(s) | 1236, 1355, 2423 |
| BsrI | ACTGG | 4 cut(s) | 124, 346, 698, 2344 |
| BssAI | RCCGGY | 3 cut(s) | 1236, 1355, 2423 |
| BssECI | CCNNGG | 4 cut(s) | 63, 1603, 1767, 2032 |
| BssHII | GCGCGC | 1 cut(s) | 1337 |
| BssSI | CACGAG | 2 cut(s) | 949, 1056 |
| BssT1I | CCWWGG | 2 cut(s) | 1603, 2032 |
| Bst2BI | CACGAG | 2 cut(s) | 949, 1056 |
| Bst2UI | CCWGG | 2 cut(s) | 1934, 2336 |
| Bst4CI | ACNGT | 8 cut(s) | 47, 85, 841, 1295, 1646, 2156, 2381, 2462 |
| Bst6I | CTCTTC | 3 cut(s) | 898, 2142, 2187 |
| BstAFI | CTTAAG | 1 cut(s) | 911 |
| BstBAI | YACGTR | 2 cut(s) | 1004, 2293 |
| BstC8I | GCNNGC | 7 cut(s) | 300, 579, 583, 966, 1339, 2066, 2341 |
| BstDEI | CTNAG | 8 cut(s) | 249, 783, 1401, 1587, 1594, 1650, 1693, 1845 |
| BstF5I | GGATG | 6 cut(s) | 112, 418, 574, 829, 1822, 2089 |
| BstFNI | CGCG | 1 cut(s) | 1339 |
| BstHHI | GCGC | 3 cut(s) | 103, 1339, 1341 |
| BstMAI | GTCTC | 3 cut(s) | 21, 782, 1622 |
| BstMCI | CGRYCG | 1 cut(s) | 2428 |
| BstNI | CCWGG | 2 cut(s) | 1934, 2336 |
| BstSCI | CCNGG | 2 cut(s) | 1932, 2334 |
| BstSFI | CTRYAG | 5 cut(s) | 312, 525, 1785, 2400, 2461 |
| BstSNI | TACGTA | 1 cut(s) | 2293 |
| BstUI | CGCG | 1 cut(s) | 1339 |
| BstV2I | GAAGAC | 2 cut(s) | 3, 2244 |
| BstX2I | RGATCY | 4 cut(s) | 244, 763, 1988, 2413 |
| BstYI | RGATCY | 4 cut(s) | 244, 763, 1988, 2413 |
| Bsu36I | CCTNAGG | 1 cut(s) | 783 |
| BsuRI | GGCC | 6 cut(s) | 1240, 1355, 1378, 1973, 2180, 2423 |
| BtsCI | GGATG | 6 cut(s) | 112, 418, 574, 829, 1822, 2089 |
| BtsI | GCAGTG | 5 cut(s) | 672, 1579, 1619, 2149, 2409 |
| BtsIMutI | CAGTG | 9 cut(s) | 149, 672, 1194, 1579, 1602, 1619, 2149, 2409, 2458 |
| BveI | ACCTGC | 1 cut(s) | 697 |
| Cac8I | GCNNGC | 7 cut(s) | 300, 579, 583, 966, 1339, 2066, 2341 |
| CaiI | CAGNNNCTG | 1 cut(s) | 940 |
| CciI | TCATGA | 1 cut(s) | 469 |
| CfoI | GCGC | 3 cut(s) | 103, 1339, 1341 |
| Cfr10I | RCCGGY | 3 cut(s) | 1236, 1355, 2423 |
| Cfr13I | GGNCC | 5 cut(s) | 363, 521, 746, 1234, 2178 |
| Csp6I | GTAC | 5 cut(s) | 1306, 2135, 2290, 2311, 2480 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 355, 390 |
| CviAII | CATG | 9 cut(s) | 409, 470, 587, 820, 1129, 1759, 1966, 2039, 2139 |
| CviQI | GTAC | 5 cut(s) | 1306, 2135, 2290, 2311, 2480 |
| DdeI | CTNAG | 8 cut(s) | 249, 783, 1401, 1587, 1594, 1650, 1693, 1845 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 74, 2110 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 74, 2110 |
| Eam1104I | CTCTTC | 3 cut(s) | 898, 2142, 2187 |
| EarI | CTCTTC | 3 cut(s) | 898, 2142, 2187 |
| Ecl136II | GAGCTC | 1 cut(s) | 95 |
| Eco105I | TACGTA | 1 cut(s) | 2293 |
| Eco130I | CCWWGG | 2 cut(s) | 1603, 2032 |
| Eco147I | AGGCCT | 1 cut(s) | 1973 |
| Eco24I | GRGCYC | 1 cut(s) | 97 |
| Eco47I | GGWCC | 4 cut(s) | 363, 521, 746, 1234 |
| Eco53kI | GAGCTC | 1 cut(s) | 95 |
| Eco57I | CTGAAG | 3 cut(s) | 39, 926, 2256 |
| Eco72I | CACGTG | 1 cut(s) | 1004 |
| Eco81I | CCTNAGG | 1 cut(s) | 783 |
| EcoICRI | GAGCTC | 1 cut(s) | 95 |
| EcoO109I | RGGNCCY | 1 cut(s) | 521 |
| EcoRI | GAATTC | 3 cut(s) | 1669, 1732, 1762 |
| EcoRII | CCWGG | 2 cut(s) | 1932, 2334 |
| EcoT14I | CCWWGG | 2 cut(s) | 1603, 2032 |
| EcoT22I | ATGCAT | 1 cut(s) | 1207 |
| EcoT38I | GRGCYC | 1 cut(s) | 97 |
| ErhI | CCWWGG | 2 cut(s) | 1603, 2032 |
| Esp3I | CGTCTC | 1 cut(s) | 21 |
| FaeI | CATG | 9 cut(s) | 412, 473, 590, 823, 1132, 1762, 1969, 2042, 2142 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 661, 693, 2313, 2345 |
| FaqI | GGGAC | 4 cut(s) | 56, 399, 1024, 1585 |
| FatI | CATG | 9 cut(s) | 408, 469, 586, 819, 1128, 1758, 1965, 2038, 2138 |
| FauNDI | CATATG | 1 cut(s) | 1939 |
| FbaI | TGATCA | 2 cut(s) | 1131, 1908 |
| FokI | GGATG | 6 cut(s) | 119, 425, 581, 836, 1829, 2096 |
| FriOI | GRGCYC | 1 cut(s) | 97 |
| FspBI | CTAG | 5 cut(s) | 792, 867, 1098, 1145, 2033 |
| FspI | TGCGCA | 1 cut(s) | 102 |
| GlaI | GCGC | 3 cut(s) | 102, 1338, 1340 |
| GsaI | CCCAGC | 1 cut(s) | 1045 |
| GsuI | CTGGAG | 1 cut(s) | 363 |
| HaeIII | GGCC | 6 cut(s) | 1240, 1355, 1378, 1973, 2180, 2423 |
| HapII | CCGG | 5 cut(s) | 875, 1228, 1237, 1356, 2424 |
| HhaI | GCGC | 3 cut(s) | 103, 1339, 1341 |
| Hin1II | CATG | 9 cut(s) | 412, 473, 590, 823, 1132, 1762, 1969, 2042, 2142 |
| Hin6I | GCGC | 3 cut(s) | 101, 1337, 1339 |
| HinP1I | GCGC | 3 cut(s) | 101, 1337, 1339 |
| HincII | GTYRAC | 1 cut(s) | 880 |
| HindII | GTYRAC | 1 cut(s) | 880 |
| HindIII | AAGCTT | 2 cut(s) | 630, 908 |
| HinfI | GANTC | 9 cut(s) | 37, 326, 652, 758, 871, 1013, 1652, 2195, 2469 |
| HpaII | CCGG | 5 cut(s) | 875, 1228, 1237, 1356, 2424 |
| HphI | GGTGA | 3 cut(s) | 1568, 2223, 2336 |
| Hpy166II | GTNNAC | 6 cut(s) | 88, 406, 880, 901, 2159, 2327 |
| Hpy188I | TCNGA | 9 cut(s) | 163, 244, 763, 768, 1350, 1413, 1459, 1651, 1768 |
| Hpy8I | GTNNAC | 6 cut(s) | 88, 406, 880, 901, 2159, 2327 |
| Hpy99I | CGWCG | 1 cut(s) | 2129 |
| HpyAV | CCTTC | 4 cut(s) | 1225, 1345, 1420, 1963 |
| HpyCH4III | ACNGT | 8 cut(s) | 47, 85, 841, 1295, 1646, 2156, 2381, 2462 |
| HpyCH4IV | ACGT | 4 cut(s) | 973, 1003, 2127, 2292 |
| HpyF3I | CTNAG | 8 cut(s) | 249, 783, 1401, 1587, 1594, 1650, 1693, 1845 |
| HpySE526I | ACGT | 4 cut(s) | 973, 1003, 2127, 2292 |
| Hsp92II | CATG | 9 cut(s) | 412, 473, 590, 823, 1132, 1762, 1969, 2042, 2142 |
| HspAI | GCGC | 3 cut(s) | 101, 1337, 1339 |
| Kpn2I | TCCGGA | 1 cut(s) | 1227 |
| Ksp22I | TGATCA | 2 cut(s) | 1131, 1908 |
| LmnI | GCTCC | 2 cut(s) | 778, 1849 |
| LweI | GCATC | 7 cut(s) | 97, 580, 906, 1103, 1460, 1781, 2074 |
| MaeI | CTAG | 5 cut(s) | 792, 867, 1098, 1145, 2033 |
| MaeII | ACGT | 4 cut(s) | 973, 1003, 2127, 2292 |
| MaeIII | GTNAC | 3 cut(s) | 1889, 2120, 2430 |
| MflI | RGATCY | 4 cut(s) | 244, 763, 1988, 2413 |
| MhlI | GDGCHC | 1 cut(s) | 97 |
| MlyI | GAGTC | 3 cut(s) | 335, 1661, 2204 |
| Mph1103I | ATGCAT | 1 cut(s) | 1207 |
| MroI | TCCGGA | 1 cut(s) | 1227 |
| MseI | TTAA | 9 cut(s) | 270, 440, 546, 912, 959, 1212, 1280, 1433, 2396 |
| MslI | CAYNNNNRTG | 4 cut(s) | 83, 468, 474, 2043 |
| MspA1I | CMGCKG | 1 cut(s) | 59 |
| MspCI | CTTAAG | 1 cut(s) | 911 |
| MspI | CCGG | 5 cut(s) | 875, 1228, 1237, 1356, 2424 |
| MspR9I | CCNGG | 2 cut(s) | 1934, 2336 |
| Mva1269I | GAATGC | 3 cut(s) | 775, 991, 1630 |
| MvaI | CCWGG | 2 cut(s) | 1934, 2336 |
| MvnI | CGCG | 1 cut(s) | 1339 |
| NdeI | CATATG | 1 cut(s) | 1939 |
| NlaIII | CATG | 9 cut(s) | 412, 473, 590, 823, 1132, 1762, 1969, 2042, 2142 |
| NlaIV | GGNNCC | 3 cut(s) | 364, 461, 780 |
| NmeAIII | GCCGAG | 1 cut(s) | 88 |
| NmuCI | GTSAC | 1 cut(s) | 2430 |
| NsbI | TGCGCA | 1 cut(s) | 102 |
| NsiI | ATGCAT | 1 cut(s) | 1207 |
| PagI | TCATGA | 1 cut(s) | 469 |
| PauI | GCGCGC | 1 cut(s) | 1337 |
| PceI | AGGCCT | 1 cut(s) | 1973 |
| PctI | GAATGC | 3 cut(s) | 775, 991, 1630 |
| PfeI | GAWTC | 6 cut(s) | 37, 652, 758, 871, 1013, 2469 |
| PleI | GAGTC | 3 cut(s) | 334, 1660, 2203 |
| PmaCI | CACGTG | 1 cut(s) | 1004 |
| PmlI | CACGTG | 1 cut(s) | 1004 |
| PpsI | GAGTC | 3 cut(s) | 334, 1660, 2203 |
| Ppu21I | YACGTR | 2 cut(s) | 1004, 2293 |
| PpuMI | RGGWCCY | 1 cut(s) | 521 |
| PshBI | ATTAAT | 1 cut(s) | 1433 |
| Psp124BI | GAGCTC | 1 cut(s) | 97 |
| Psp5II | RGGWCCY | 1 cut(s) | 521 |
| Psp6I | CCWGG | 2 cut(s) | 1932, 2334 |
| PspCI | CACGTG | 1 cut(s) | 1004 |
| PspFI | CCCAGC | 1 cut(s) | 1041 |
| PspGI | CCWGG | 2 cut(s) | 1932, 2334 |
| PspN4I | GGNNCC | 3 cut(s) | 364, 461, 780 |
| PspPI | GGNCC | 5 cut(s) | 363, 521, 746, 1234, 2178 |
| PspPPI | RGGWCCY | 1 cut(s) | 521 |
| PstI | CTGCAG | 2 cut(s) | 316, 2404 |
| PstNI | CAGNNNCTG | 1 cut(s) | 940 |
| PsuI | RGATCY | 4 cut(s) | 244, 763, 1988, 2413 |
| PteI | GCGCGC | 1 cut(s) | 1337 |
| PvuII | CAGCTG | 1 cut(s) | 59 |
| RsaI | GTAC | 5 cut(s) | 1307, 2136, 2291, 2312, 2481 |
| RsaNI | GTAC | 5 cut(s) | 1306, 2135, 2290, 2311, 2480 |
| RseI | CAYNNNNRTG | 4 cut(s) | 83, 468, 474, 2043 |
| SacI | GAGCTC | 1 cut(s) | 97 |
| SaqAI | TTAA | 9 cut(s) | 270, 440, 546, 912, 959, 1212, 1280, 1433, 2396 |
| Sau96I | GGNCC | 5 cut(s) | 363, 521, 746, 1234, 2178 |
| ScaI | AGTACT | 1 cut(s) | 1307 |
| SchI | GAGTC | 3 cut(s) | 335, 1661, 2204 |
| ScrFI | CCNGG | 2 cut(s) | 1934, 2336 |
| SduI | GDGCHC | 1 cut(s) | 97 |
| SfaNI | GCATC | 7 cut(s) | 97, 580, 906, 1103, 1460, 1781, 2074 |
| SfcI | CTRYAG | 5 cut(s) | 312, 525, 1785, 2400, 2461 |
| SinI | GGWCC | 4 cut(s) | 363, 521, 746, 1234 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 83, 468, 474, 2043 |
| SmlI | CTYRAG | 4 cut(s) | 170, 911, 2261, 2417 |
| SmoI | CTYRAG | 4 cut(s) | 170, 911, 2261, 2417 |
| SnaBI | TACGTA | 1 cut(s) | 2293 |
| SseBI | AGGCCT | 1 cut(s) | 1973 |
| SsiI | CCGC | 7 cut(s) | 153, 218, 449, 503, 710, 2049, 2487 |
| SspI | AATATT | 2 cut(s) | 208, 997 |
| SspMI | CTAG | 5 cut(s) | 792, 867, 1098, 1145, 2033 |
| SstI | GAGCTC | 1 cut(s) | 97 |
| StuI | AGGCCT | 1 cut(s) | 1973 |
| StyD4I | CCNGG | 2 cut(s) | 1932, 2334 |
| StyI | CCWWGG | 2 cut(s) | 1603, 2032 |
| TaaI | ACNGT | 8 cut(s) | 47, 85, 841, 1295, 1646, 2156, 2381, 2462 |
| TaiI | ACGT | 4 cut(s) | 976, 1006, 2130, 2295 |
| TaqI | TCGA | 8 cut(s) | 138, 229, 304, 1105, 1124, 1393, 2015, 2467 |
| TaqII | GACCGA | 1 cut(s) | 2418 |
| TatI | WGTACW | 1 cut(s) | 1305 |
| TauI | GCSGC | 1 cut(s) | 2051 |
| TfiI | GAWTC | 6 cut(s) | 37, 652, 758, 871, 1013, 2469 |
| Tru1I | TTAA | 9 cut(s) | 270, 440, 546, 912, 959, 1212, 1280, 1433, 2396 |
| Tru9I | TTAA | 9 cut(s) | 270, 440, 546, 912, 959, 1212, 1280, 1433, 2396 |
| TscAI | CASTG | 9 cut(s) | 149, 679, 1194, 1579, 1602, 1619, 2149, 2409, 2465 |
| TseFI | GTSAC | 1 cut(s) | 2430 |
| Tsp45I | GTSAC | 1 cut(s) | 2430 |
| TspGWI | ACGGA | 4 cut(s) | 9, 481, 1500, 2217 |
| TspRI | CASTG | 9 cut(s) | 149, 679, 1194, 1579, 1602, 1619, 2149, 2409, 2465 |
| Vha464I | CTTAAG | 1 cut(s) | 911 |
| VpaK11BI | GGWCC | 4 cut(s) | 363, 521, 746, 1234 |
| VspI | ATTAAT | 1 cut(s) | 1433 |
| XapI | RAATTY | 6 cut(s) | 416, 1669, 1732, 1762, 2019, 2296 |
| XmaJI | CCTAGG | 1 cut(s) | 2032 |
| XspI | CTAG | 5 cut(s) | 792, 867, 1098, 1145, 2033 |
| ZrmI | AGTACT | 1 cut(s) | 1307 |
| Zsp2I | ATGCAT | 1 cut(s) | 1207 |