pycom15g26910

GTPase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0018491
Physical Location & Seq
Forward (+)
22153629 .. 22154420
792 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g26910.3

Sequence Viewer

Length: 309 bp
ATGACACTGTTATATCCAAACCAAAGTTTGGAGAATTTGATATATGTTGGATACAATGGCAATCCTGCTTCAGCTATCCATGTTACTAGAAGAAGATCAGAAGATCATAAAAGGCAAAAAACAGAAAGAAATGTTAGCTGCTTCGTTTTTTGTCCTAAAAATGCAGAAAAATCCCCTCTTTTAAATTCATTTATAGGAAGGCCTTTCTCAAAGAGCGAGACTATACCTACTGGTGAGCGTTATGCAGTGAATGTCATTAACCAGATTGGGGACTTCATTAATCGTTTAGAAGCGCAGCCAATGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000001 GO:0000166 GO:0000226 GO:0000287 GO:0001505 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005509 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005783 GO:0005829 GO:0005886 GO:0006464 GO:0006508 GO:0006807 GO:0006810 GO:0006839 GO:0006915 GO:0006928 GO:0006996 GO:0007005 GO:0007006 GO:0007010 GO:0007017 GO:0007018 GO:0007154 GO:0007165 GO:0008088 GO:0008150 GO:0008152 GO:0008219 GO:0008637 GO:0009966 GO:0009987 GO:0010570 GO:0010646 GO:0010821 GO:0010970 GO:0012501 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016192 GO:0016462 GO:0016579 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019538 GO:0019725 GO:0019867 GO:0019896 GO:0022406 GO:0023051 GO:0023052 GO:0030705 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032386 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032592 GO:0032865 GO:0032879 GO:0032886 GO:0032991 GO:0033043 GO:0034640 GO:0034643 GO:0035639 GO:0035794 GO:0036094 GO:0036211 GO:0040008 GO:0042592 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044232 GO:0044233 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0046872 GO:0046902 GO:0046907 GO:0046928 GO:0047497 GO:0048308 GO:0048311 GO:0048489 GO:0048583 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051056 GO:0051128 GO:0051179 GO:0051234 GO:0051270 GO:0051588 GO:0051640 GO:0051641 GO:0051646 GO:0051648 GO:0051649 GO:0051650 GO:0051654 GO:0051656 GO:0051716 GO:0055081 GO:0055088 GO:0055091 GO:0060237 GO:0060341 GO:0060632 GO:0061024 GO:0065007 GO:0065008 GO:0070646 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0072384 GO:0090559 GO:0097159 GO:0097190 GO:0097345 GO:0097367 GO:0097479 GO:0097480 GO:0098573 GO:0098588 GO:0098796 GO:0098798 GO:0098799 GO:0098805 GO:0098930 GO:0099003 GO:0099098 GO:0099111 GO:0099177 GO:0140056 GO:1900428 GO:1901265 GO:1901363 GO:1901564 GO:1902108 GO:1902110 GO:1902513 GO:1902531 GO:1902686 GO:1903338 GO:1903530 GO:1905710 GO:1990456
KEGG Pathways
Metabolic & Signaling
ko04137 ko04214 map04137 map04214
Pfam Domains
Protein Families
EF-hand_5 EF_assoc_1 EF_assoc_2 Ras

Protein Analysis

103

Amino Acids

11.66

Weight (kDa)

9.34

Isoelectric Point (pI)

56.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 28
AcsI RAATTY 2 cut(s) 34, 184
AcuI CTGAAG 1 cut(s) 54
AfiI CCNNNNNNNGG 2 cut(s) 28, 268
AluBI AGCT 2 cut(s) 74, 138
AluI AGCT 2 cut(s) 74, 138
Alw26I GTCTC 1 cut(s) 212
AoxI GGCC 1 cut(s) 200
ApeKI GCWGC 2 cut(s) 138, 295
ApoI RAATTY 2 cut(s) 34, 184
AseI ATTAAT 1 cut(s) 279
AspLEI GCGC 1 cut(s) 295
AsuHPI GGTGA 1 cut(s) 245
BbvI GCAGC 1 cut(s) 125
BciVI GTATCC 1 cut(s) 44
BcoDI GTCTC 1 cut(s) 212
BfaI CTAG 1 cut(s) 87
BfuI GTATCC 1 cut(s) 44
BisI GCNGC 2 cut(s) 139, 296
BlsI GCNGC 2 cut(s) 140, 297
Bsc4I CCNNNNNNNGG 2 cut(s) 28, 268
Bse1I ACTGG 1 cut(s) 235
BseLI CCNNNNNNNGG 2 cut(s) 28, 268
BseNI ACTGG 1 cut(s) 235
BseXI GCAGC 1 cut(s) 125
BshFI GGCC 1 cut(s) 202
BslFI GGGAC 1 cut(s) 284
BslI CCNNNNNNNGG 2 cut(s) 28, 268
BsmAI GTCTC 1 cut(s) 212
BsmFI GGGAC 1 cut(s) 284
BsnI GGCC 1 cut(s) 202
Bsp143I GATC 2 cut(s) 95, 103
BspANI GGCC 1 cut(s) 202
BsrI ACTGG 1 cut(s) 235
BssMI GATC 2 cut(s) 95, 103
Bst4CI ACNGT 1 cut(s) 9
BstHHI GCGC 1 cut(s) 295
BstKTI GATC 2 cut(s) 98, 106
BstMAI GTCTC 1 cut(s) 212
BstMBI GATC 2 cut(s) 95, 103
BstV1I GCAGC 1 cut(s) 125
BsuI GTATCC 1 cut(s) 44
BsuRI GGCC 1 cut(s) 202
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 2 cut(s) 5, 252
CfoI GCGC 1 cut(s) 295
CviAII CATG 1 cut(s) 80
CviJI RGCY 4 cut(s) 74, 138, 202, 298
CviKI_1 RGCY 4 cut(s) 74, 138, 202, 298
DpnI GATC 2 cut(s) 97, 105
DpnII GATC 2 cut(s) 95, 103
DraI TTTAAA 1 cut(s) 183
Eco147I AGGCCT 1 cut(s) 202
Eco57I CTGAAG 1 cut(s) 54
FaeI CATG 1 cut(s) 83
FaiI YATR 8 cut(s) 13, 43, 45, 81, 108, 194, 224, 243
FaqI GGGAC 1 cut(s) 284
FatI CATG 1 cut(s) 79
Fnu4HI GCNGC 2 cut(s) 139, 296
Fsp4HI GCNGC 2 cut(s) 139, 296
FspBI CTAG 1 cut(s) 87
GlaI GCGC 1 cut(s) 294
GluI GCNGC 2 cut(s) 139, 296
HaeIII GGCC 1 cut(s) 202
HhaI GCGC 1 cut(s) 295
Hin1II CATG 1 cut(s) 83
Hin6I GCGC 1 cut(s) 293
HinP1I GCGC 1 cut(s) 293
HphI GGTGA 1 cut(s) 245
Hpy188I TCNGA 1 cut(s) 100
HpyAV CCTTC 1 cut(s) 192
HpyCH4III ACNGT 1 cut(s) 9
HpyCH4V TGCA 2 cut(s) 164, 245
Hsp92II CATG 1 cut(s) 83
HspAI GCGC 1 cut(s) 293
Kzo9I GATC 2 cut(s) 95, 103
LpnPI CCDG 3 cut(s) 78, 216, 275
Lsp1109I GCAGC 1 cut(s) 125
MaeI CTAG 1 cut(s) 87
MaeIII GTNAC 1 cut(s) 82
MalI GATC 2 cut(s) 97, 105
MboI GATC 2 cut(s) 95, 103
MboII GAAGA 3 cut(s) 102, 105, 113
MluCI AATT 2 cut(s) 34, 184
MmeI TCCRAC 1 cut(s) 28
MnlI CCTC 1 cut(s) 186
MseI TTAA 3 cut(s) 182, 258, 279
NdeII GATC 2 cut(s) 95, 103
NlaIII CATG 1 cut(s) 83
PceI AGGCCT 1 cut(s) 202
PflMI CCANNNNNTGG 1 cut(s) 28
PkrI GCNGC 2 cut(s) 140, 297
PshBI ATTAAT 1 cut(s) 279
SaqAI TTAA 3 cut(s) 182, 258, 279
SatI GCNGC 2 cut(s) 139, 296
Sau3AI GATC 2 cut(s) 95, 103
SetI ASST 3 cut(s) 76, 140, 229
SgeI CNNG 6 cut(s) 77, 92, 99, 229, 243, 274
Sse9I AATT 2 cut(s) 34, 184
SseBI AGGCCT 1 cut(s) 202
SspMI CTAG 1 cut(s) 87
StuI AGGCCT 1 cut(s) 202
TaaI ACNGT 1 cut(s) 9
TasI AATT 2 cut(s) 34, 184
Tru1I TTAA 3 cut(s) 182, 258, 279
Tru9I TTAA 3 cut(s) 182, 258, 279
TscAI CASTG 2 cut(s) 12, 252
TseI GCWGC 2 cut(s) 138, 295
TspDTI ATGAA 2 cut(s) 177, 265
TspRI CASTG 2 cut(s) 12, 252
Van91I CCANNNNNTGG 1 cut(s) 28
VspI ATTAAT 1 cut(s) 279
XapI RAATTY 2 cut(s) 34, 184
XspI CTAG 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.