Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0009812

Physical Location & Seq

Genomic Coordinates Reverse (-)

29645936 .. 29651258

Gene Structure 5323 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGATACCTACATGGTTGGCGTGCTTGTTCCTCTGTTACTAACAATTATGATTCAGAAATCGATGAGAGCGAAGCAACGGGGTGTGCCCGTTGATGTTGGTGGGGAACCCGGGTATGCAATCCGAAACCATCGGTTTACTGCCCCTGTTGCAACACTATGGAAGGGTGTTACTACTCTTGCAGAGCTTTTCGAGCAGTCATCCAAGCGGTTCCTAGAGAAACGCCTTCTTGGAACCCGGGCATTGATTGCAAGGGAGGTTGAGGTATCAAAGGATGGAAGATCCTTTGAGAAGCTTCATTTGGGAGACTACGAATGGCTGACCTATGGGAAGGCATTTGAAGTAGCGTGCAACTTTGCTTCCGGTTTAGCTCAACTTGGACATAATAGGGAAGAGAAAGTGGCAATCTTTGCTGACACAAGGAAAGAGTGGTTTCTTGCATTGCAGGGTTGTTTTAGGCGCAATGTCACTGTTGTTACCATCTATGCATCTCTCGGGGAGGAGGCTCTATGTCACTCACTGAATGAGACGGAAGTTACAACTGTGATATGTGGGCATAAAGAACTGAAGAAACTTCTAGACATAAGTGGAAAACTAGATACAGTGAAGCGAATCATATGTATGGATGCCAATATCCCATCCAGTGCCTCATCTGTTCAAAGTCGCTGGAGAATCACTTCGTTTGATGATGTTGAGAAACTTGGCCGAGAAAACCCTGTTGATCCCGATTTACCTCTTCCAGAAGATATTGCAGTCATTATGTATACAAGTGGAAGTACTGGATTACCCAAGGGTGTAATGATGACACATGCCAATGTGCTAGCTGTAGCTTCTGCGGTCATGACTATTGTTCCCGGCCTTGGAGGCAAGGATGTTTATCTGGCATATCTTCCCCTCGCTCATATCCTTGAATTAGCAGCGGAGAACTTCTTGGTTGCTGTTGGAAGTGCCATAGGGTATGGATCTCCGTTGACCCTTACTGATACGTCAAGTAAAATTAAAAGGGGAACAAAAGGGGATGCAACTGCACTCTTGCCAACTGTATTGACAGCTGTCCCTGCAATTCTTGATCGTGTTCGAGATGGAGTGCTCAACAAGGTAAATGCGAAGGGTGGACTAGCCAAAATATTGTTTCACTTGGCATATACTCGTAGGTTGTCTGCTGTGAATGGGAGTTGGTTCGGGGCTTGGGGCCTGGAAAAGTTTCTGTGGAACCTTCTTGTGTTTAGAAAGGTCCGTGCAGTTCTAGGAGGTCGCCTTCGTTTTATTCTTTCTGGTGGTGCTCCTCTCTCGGGTGATACTCAAAGATTCATCAACATCTGCTTTGGTTCTCCAATTGGTCAAGGGTATGGCCTCACTGAAACTTGCGCTGGTGGGACATTCTCAGAGTTTGACGATACTTCTGTAGGTCGAGTTGGAGCTCCGCTTCCATGCTCATTTGTAAAGTTAATTGATTGGCCGGAAGGAGGATATCTGAATACCGATACCCCGATGCCTCGTGGAGAGATAGTCATTGGTGGTCCAAATGTTACACTTGGTTATTTCAAAAATGAAGAGAAAACAAGAGAGTCATACAAGGTTGACGAGAAAGGAATGAGATGGTTCTATACAGGTGACATAGGGCGATTTCATGGTGATGGTTGTCTTGAGATAATTGACCGTAAGAAGGATATAGTCAAACTTCAGCACGGGGAGTATGTCTCCCTAGGAAAGGTTGAGGCTGCTCTTTCAGTGTGCCCCTACGTCGACAATATCATGTTGCATGCTGATCCTTTTCATAGTTACTGTGTGACTCTTGTGGTGGCTTCTCGAGTCACATTAGAAGAATGGGCTGCAAAACAAGAGATCACTTTTACCGATTTTGCGGACTTGTGTTCGAAAGCAGAAACCATAAAAGAAGTGCAAGCATCACTTGTAAAGGAAGCAAAGAAGGCGCGTTTGGAGAAGTTTGAGATCCCTGCCAAAATCGAACTGCTTTCGGAACCATGGACTCCAGAATCCGGCCTGGTCACTGCAGCTCTCAAGCTCAAGAGAGATGTCATTAGGAAGGCTTTCTCAGAAGACCTCGCCAAGTTATACGCTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

696

Amino Acids

76.29

Weight (kDa)

8.27

Isoelectric Point (pI)

33.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	100 - 515	9.9e-84	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009812)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77590 AT1G77590
fragaria_vesca	FvH4_2g26850
malus_domestica	MD08G1163100.v1.1 MD15G1349800.v1.1
prunus_persica	Prupe.1G499000_v2.0.a1 Prupe.1G499000_v2.0.a1
pyrus_communis	pycom08g14100 pycom15g31290
rosa_chinensis	RchiOBHm_Chr6g0295701
rosa_laevigata	RLG00000011774
rosa_multiflora	Rmu_sc0007372.1_g000004 Rmu_sc0007986.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172200
rosa_rugosa	Rorug06G0253400 Rorug06G0253500 Rorug06G0253600
rosa_samantha	Rh6AG367000 Rh6BG374800 Rh6DG367900
rosa_wichuraiana	Rw6G032030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	764, 1746
AccII	CGCG	1 cut(s)	1936
AciI	CCGC	5 cut(s)	208, 836, 920, 1424, 1865
AclWI	GGATC	5 cut(s)	276, 716, 970, 1763, 1948
AcoI	YGGCCR	2 cut(s)	703, 1457
AcuI	CTGAAG	2 cut(s)	587, 1667
AfaI	GTAC	1 cut(s)	778
AfiI	CCNNNNNNNGG	6 cut(s)	860, 1292, 1466, 1666, 1711, 2000
AgsI	TTSAA	4 cut(s)	341, 659, 911, 1546
AjnI	CCWGG	2 cut(s)	1194, 2004
AjuI	GAANNNNNNNTTGG	4 cut(s)	284, 316, 1922, 1954
AluBI	AGCT	9 cut(s)	187, 295, 371, 824, 830, 1052, 1421, 2018, 2026
AluI	AGCT	9 cut(s)	187, 295, 371, 824, 830, 1052, 1421, 2018, 2026
Alw21I	GWGCWC	3 cut(s)	1092, 1285, 1423
Alw26I	GTCTC	3 cut(s)	300, 521, 1705
AlwI	GGATC	5 cut(s)	276, 716, 970, 1763, 1948
Ama87I	CYCGRG	5 cut(s)	110, 237, 494, 1291, 1809
AoxI	GGCC	6 cut(s)	703, 856, 1192, 1351, 1457, 2002
ApeKI	GCWGC	4 cut(s)	917, 1721, 1832, 2015
Asp700I	GAANNNNTTC	3 cut(s)	676, 1203, 2051
AspA2I	CCTAGG	1 cut(s)	1705
AspLEI	GCGC	3 cut(s)	462, 1370, 1936
AspS9I	GGNCC	3 cut(s)	1192, 1234, 1520
AsuC2I	CCSGG	5 cut(s)	111, 112, 238, 239, 855
AsuHPI	GGTGA	3 cut(s)	1307, 1625, 1646
AsuII	TTCGAA	1 cut(s)	1877
AsuNHI	GCTAGC	1 cut(s)	820
AvaI	CYCGRG	5 cut(s)	110, 237, 494, 1291, 1809
AvaII	GGWCC	2 cut(s)	1234, 1520
AvrII	CCTAGG	1 cut(s)	1705
BaeGI	GKGCMC	2 cut(s)	90, 1739
BaeI	ACNNNNGTAYC	2 cut(s)	1389, 1422
BanII	GRGCYC	1 cut(s)	1423
BauI	CACGAG	1 cut(s)	1497
BbsI	GAAGAC	1 cut(s)	2067
Bbv12I	GWGCWC	3 cut(s)	1092, 1285, 1423
BbvI	GCAGC	4 cut(s)	929, 1708, 1819, 2027
BccI	CCATC	7 cut(s)	138, 269, 488, 646, 1076, 1593, 1631
BciT130I	CCWGG	2 cut(s)	1196, 2006
BcnI	CCSGG	5 cut(s)	111, 112, 238, 239, 855
BcoDI	GTCTC	3 cut(s)	300, 521, 1705
BfaI	CTAG	7 cut(s)	215, 578, 596, 821, 1118, 1247, 1706
BfmI	CTRYAG	3 cut(s)	825, 1404, 2013
BglI	GCCNNNNNGGC	1 cut(s)	864
BisI	GCNGC	4 cut(s)	918, 1722, 1833, 2016
BlnI	CCTAGG	1 cut(s)	1705
BlsI	GCNGC	4 cut(s)	919, 1723, 1834, 2017
BmcAI	AGTACT	1 cut(s)	778
Bme1390I	CCNGG	7 cut(s)	111, 112, 238, 239, 855, 1196, 2006
Bme18I	GGWCC	2 cut(s)	1234, 1520
BmeT110I	CYCGRG	5 cut(s)	110, 237, 494, 1291, 1809
BmgT120I	GGNCC	3 cut(s)	1192, 1234, 1520
BmiI	GGNNCC	6 cut(s)	108, 212, 235, 1193, 1214, 1983
BmrFI	CCNGG	7 cut(s)	111, 112, 238, 239, 855, 1196, 2006
BmsI	GCATC	5 cut(s)	497, 616, 1009, 1482, 1916
BmtI	GCTAGC	1 cut(s)	824
BoxI	GACNNNNGTC	1 cut(s)	1052
BpiI	GAAGAC	1 cut(s)	2067
BplI	GAGNNNNNCTC	2 cut(s)	1685, 1717
BpmI	CTGGAG	2 cut(s)	688, 1977
Bpu14I	TTCGAA	1 cut(s)	1877
BpuEI	CTTGAG	3 cut(s)	1667, 2006, 2012
BpuMI	CCSGG	5 cut(s)	111, 112, 238, 239, 855
Bsa29I	ATCGAT	1 cut(s)	62
BsaBI	GATNNNNATC	1 cut(s)	876
BsaJI	CCNNGG	6 cut(s)	110, 237, 789, 859, 1705, 1985
BsaWI	WCCGGW	1 cut(s)	362
BsaXI	ACNNNNNCTCC	2 cut(s)	1494, 1524
Bsc4I	CCNNNNNNNGG	6 cut(s)	860, 1292, 1466, 1666, 1711, 2000
Bse1I	ACTGG	2 cut(s)	642, 784
Bse3DI	GCAATG	2 cut(s)	440, 469
Bse8I	GATNNNNATC	1 cut(s)	876
BseBI	CCWGG	2 cut(s)	1196, 2006
BseCI	ATCGAT	1 cut(s)	62
BseDI	CCNNGG	6 cut(s)	110, 237, 789, 859, 1705, 1985
BseGI	GGATG	6 cut(s)	200, 280, 631, 638, 877, 1024
BseJI	GATNNNNATC	1 cut(s)	876
BseLI	CCNNNNNNNGG	6 cut(s)	860, 1292, 1466, 1666, 1711, 2000
BseMI	GCAATG	2 cut(s)	440, 469
BseMII	CTCAG	2 cut(s)	1398, 2070
BseNI	ACTGG	2 cut(s)	642, 784
BseRI	GAGGAG	2 cut(s)	515, 1275
BseSI	GKGCMC	2 cut(s)	90, 1739
BseXI	GCAGC	4 cut(s)	929, 1708, 1819, 2027
BsgI	GTGCAG	2 cut(s)	1011, 1260
Bsh1236I	CGCG	1 cut(s)	1936
BshFI	GGCC	6 cut(s)	705, 858, 1194, 1353, 1459, 2004
BshVI	ATCGAT	1 cut(s)	62
BsiHKAI	GWGCWC	3 cut(s)	1092, 1285, 1423
BsiHKCI	CYCGRG	5 cut(s)	110, 237, 494, 1291, 1809
BsiSI	CCGG	6 cut(s)	111, 238, 363, 855, 1460, 2001
BslFI	GGGAC	2 cut(s)	1040, 1390
BslI	CCNNNNNNNGG	6 cut(s)	860, 1292, 1466, 1666, 1711, 2000
BsmAI	GTCTC	3 cut(s)	300, 521, 1705
BsmBI	CGTCTC	1 cut(s)	521
BsmFI	GGGAC	2 cut(s)	1040, 1390
BsnI	GGCC	6 cut(s)	705, 858, 1194, 1353, 1459, 2004
BsoBI	CYCGRG	5 cut(s)	110, 237, 494, 1291, 1809
Bsp119I	TTCGAA	1 cut(s)	1877
Bsp1286I	GDGCHC	5 cut(s)	90, 1092, 1285, 1423, 1739
Bsp143I	GATC	7 cut(s)	281, 721, 962, 1069, 1768, 1845, 1953
Bsp19I	CCATGG	1 cut(s)	1985
BspACI	CCGC	5 cut(s)	208, 836, 920, 1424, 1865
BspANI	GGCC	6 cut(s)	705, 858, 1194, 1353, 1459, 2004
BspCNI	CTCAG	2 cut(s)	1397, 2069
BspDI	ATCGAT	1 cut(s)	62
BspFNI	CGCG	1 cut(s)	1936
BspHI	TCATGA	1 cut(s)	840
BspLI	GGNNCC	6 cut(s)	108, 212, 235, 1193, 1214, 1983
BspMAI	CTGCAG	1 cut(s)	2017
BspOI	GCTAGC	1 cut(s)	824
BspPI	GGATC	5 cut(s)	276, 716, 970, 1763, 1948
BspT104I	TTCGAA	1 cut(s)	1877
BsrDI	GCAATG	2 cut(s)	440, 469
BsrI	ACTGG	2 cut(s)	642, 784
BssECI	CCNNGG	6 cut(s)	110, 237, 789, 859, 1705, 1985
BssMI	GATC	7 cut(s)	281, 721, 962, 1069, 1768, 1845, 1953
BssNAI	GTATAC	1 cut(s)	765
BssSI	CACGAG	1 cut(s)	1497
BssT1I	CCWWGG	4 cut(s)	789, 859, 1705, 1985
Bst1107I	GTATAC	1 cut(s)	765
Bst2BI	CACGAG	1 cut(s)	1497
Bst2UI	CCWGG	2 cut(s)	1196, 2006
Bst4CI	ACNGT	6 cut(s)	472, 544, 604, 1042, 1661, 1787
Bst6I	CTCTTC	3 cut(s)	387, 741, 1548
BstAPI	GCANNNNNTGC	2 cut(s)	248, 410
BstBI	TTCGAA	1 cut(s)	1877
BstC8I	GCNNGC	5 cut(s)	23, 349, 822, 1764, 1905
BstDEI	CTNAG	2 cut(s)	1384, 2056
BstDSI	CCRYGG	1 cut(s)	1985
BstENI	CCTNNNNNAGG	1 cut(s)	1709
BstF5I	GGATG	6 cut(s)	200, 280, 631, 638, 877, 1024
BstFNI	CGCG	1 cut(s)	1936
BstHHI	GCGC	3 cut(s)	462, 1370, 1936
BstKTI	GATC	7 cut(s)	284, 724, 965, 1072, 1771, 1848, 1956
BstMAI	GTCTC	3 cut(s)	300, 521, 1705
BstMBI	GATC	7 cut(s)	281, 721, 962, 1069, 1768, 1845, 1953
BstMWI	GCNNNNNNNGC	7 cut(s)	149, 193, 248, 410, 864, 1058, 1931
BstNI	CCWGG	2 cut(s)	1196, 2006
BstNSI	RCATGY	2 cut(s)	812, 1766
BstPAI	GACNNNNGTC	1 cut(s)	1052
BstSCI	CCNGG	7 cut(s)	109, 110, 236, 237, 853, 1194, 2004
BstSFI	CTRYAG	3 cut(s)	825, 1404, 2013
BstSLI	GKGCMC	2 cut(s)	90, 1739
BstUI	CGCG	1 cut(s)	1936
BstV1I	GCAGC	4 cut(s)	929, 1708, 1819, 2027
BstV2I	GAAGAC	1 cut(s)	2067
BstX2I	RGATCY	3 cut(s)	281, 962, 1953
BstYI	RGATCY	3 cut(s)	281, 962, 1953
BstZ17I	GTATAC	1 cut(s)	765
Bsu15I	ATCGAT	1 cut(s)	62
BsuRI	GGCC	6 cut(s)	705, 858, 1194, 1353, 1459, 2004
BsuTUI	ATCGAT	1 cut(s)	62
BtgI	CCRYGG	1 cut(s)	1985
BtsCI	GGATG	6 cut(s)	200, 280, 631, 638, 877, 1024
BtsI	GCAGTG	1 cut(s)	2010
BtsIMutI	CAGTG	7 cut(s)	468, 518, 609, 649, 1356, 1737, 2010
Cac8I	GCNNGC	5 cut(s)	23, 349, 822, 1764, 1905
CciI	TCATGA	1 cut(s)	840
CfoI	GCGC	3 cut(s)	462, 1370, 1936
Cfr13I	GGNCC	3 cut(s)	1192, 1234, 1520
Cfr9I	CCCGGG	2 cut(s)	110, 237
ClaI	ATCGAT	1 cut(s)	62
Csp6I	GTAC	1 cut(s)	777
CviAII	CATG	8 cut(s)	13, 809, 841, 1431, 1631, 1756, 1763, 1986
CviQI	GTAC	1 cut(s)	777
DdeI	CTNAG	2 cut(s)	1384, 2056
DpnI	GATC	7 cut(s)	283, 723, 964, 1071, 1770, 1847, 1955
DpnII	GATC	7 cut(s)	281, 721, 962, 1069, 1768, 1845, 1953
EaeI	YGGCCR	2 cut(s)	703, 1457
Eam1104I	CTCTTC	3 cut(s)	387, 741, 1548
EarI	CTCTTC	3 cut(s)	387, 741, 1548
Ecl136II	GAGCTC	1 cut(s)	1421
Eco130I	CCWWGG	4 cut(s)	789, 859, 1705, 1985
Eco24I	GRGCYC	1 cut(s)	1423
Eco32I	GATATC	1 cut(s)	1472
Eco47I	GGWCC	2 cut(s)	1234, 1520
Eco53kI	GAGCTC	1 cut(s)	1421
Eco57I	CTGAAG	2 cut(s)	587, 1667
Eco88I	CYCGRG	5 cut(s)	110, 237, 494, 1291, 1809
EcoICRI	GAGCTC	1 cut(s)	1421
EcoNI	CCTNNNNNAGG	1 cut(s)	1709
EcoO109I	RGGNCCY	1 cut(s)	1192
EcoRII	CCWGG	2 cut(s)	1194, 2004
EcoRV	GATATC	1 cut(s)	1472
EcoT14I	CCWWGG	4 cut(s)	789, 859, 1705, 1985
EcoT22I	ATGCAT	1 cut(s)	490
EcoT38I	GRGCYC	1 cut(s)	1423
ErhI	CCWWGG	4 cut(s)	789, 859, 1705, 1985
Esp3I	CGTCTC	1 cut(s)	521
FaeI	CATG	8 cut(s)	16, 812, 844, 1434, 1634, 1759, 1766, 1989
FalI	AAGNNNNNCTT	2 cut(s)	1896, 1928
FaqI	GGGAC	2 cut(s)	1040, 1390
FatI	CATG	8 cut(s)	12, 808, 840, 1430, 1630, 1755, 1762, 1985
FauNDI	CATATG	1 cut(s)	617
FblI	GTMKAC	2 cut(s)	764, 1746
Fnu4HI	GCNGC	4 cut(s)	918, 1722, 1833, 2016
FokI	GGATG	6 cut(s)	187, 287, 625, 638, 884, 1031
FriOI	GRGCYC	1 cut(s)	1423
Fsp4HI	GCNGC	4 cut(s)	918, 1722, 1833, 2016
FspBI	CTAG	7 cut(s)	215, 578, 596, 821, 1118, 1247, 1706
GlaI	GCGC	3 cut(s)	461, 1369, 1935
GluI	GCNGC	4 cut(s)	918, 1722, 1833, 2016
GsuI	CTGGAG	2 cut(s)	688, 1977
HaeIII	GGCC	6 cut(s)	705, 858, 1194, 1353, 1459, 2004
HapII	CCGG	6 cut(s)	111, 238, 363, 855, 1460, 2001
HhaI	GCGC	3 cut(s)	462, 1370, 1936
Hin1II	CATG	8 cut(s)	16, 812, 844, 1434, 1634, 1759, 1766, 1989
Hin6I	GCGC	3 cut(s)	460, 1368, 1934
HinP1I	GCGC	3 cut(s)	460, 1368, 1934
HincII	GTYRAC	3 cut(s)	972, 1582, 1747
HindII	GTYRAC	3 cut(s)	972, 1582, 1747
HindIII	AAGCTT	1 cut(s)	293
HinfI	GANTC	9 cut(s)	52, 612, 672, 1308, 1568, 1792, 1812, 1990, 1997
HpaII	CCGG	6 cut(s)	111, 238, 363, 855, 1460, 2001
HphI	GGTGA	3 cut(s)	1307, 1625, 1646
Hpy166II	GTNNAC	6 cut(s)	138, 765, 972, 1115, 1582, 1747
Hpy188I	TCNGA	6 cut(s)	57, 125, 1387, 1476, 1981, 2059
Hpy8I	GTNNAC	6 cut(s)	138, 765, 972, 1115, 1582, 1747
Hpy99I	CGWCG	1 cut(s)	1748
HpyCH4III	ACNGT	6 cut(s)	472, 544, 604, 1042, 1661, 1787
HpyCH4IV	ACGT	2 cut(s)	986, 1743
HpyF10VI	GCNNNNNNNGC	7 cut(s)	149, 193, 248, 410, 864, 1058, 1931
HpyF3I	CTNAG	2 cut(s)	1384, 2056
HpySE526I	ACGT	2 cut(s)	986, 1743
Hsp92II	CATG	8 cut(s)	16, 812, 844, 1434, 1634, 1759, 1766, 1989
HspAI	GCGC	3 cut(s)	460, 1368, 1934
Kzo9I	GATC	7 cut(s)	281, 721, 962, 1069, 1768, 1845, 1953
LmnI	GCTCC	3 cut(s)	1288, 1418, 1426
Lsp1109I	GCAGC	4 cut(s)	929, 1708, 1819, 2027
LweI	GCATC	5 cut(s)	497, 616, 1009, 1482, 1916
MaeI	CTAG	7 cut(s)	215, 578, 596, 821, 1118, 1247, 1706
MaeII	ACGT	2 cut(s)	986, 1743
MalI	GATC	7 cut(s)	283, 723, 964, 1071, 1770, 1847, 1955
MboI	GATC	7 cut(s)	281, 721, 962, 1069, 1768, 1845, 1953
MboII	GAAGA	9 cut(s)	291, 404, 580, 728, 755, 881, 1565, 1835, 2072
MfeI	CAATTG	1 cut(s)	1335
MflI	RGATCY	3 cut(s)	281, 962, 1953
MhlI	GDGCHC	5 cut(s)	90, 1092, 1285, 1423, 1739
MluCI	AATT	7 cut(s)	45, 911, 996, 1062, 1335, 1449, 1653
MlyI	GAGTC	4 cut(s)	1577, 1786, 1821, 1984
MmeI	TCCRAC	2 cut(s)	922, 1396
Mph1103I	ATGCAT	1 cut(s)	490
MroXI	GAANNNNTTC	3 cut(s)	676, 1203, 2051
MseI	TTAA	2 cut(s)	999, 1448
MslI	CAYNNNNRTG	3 cut(s)	620, 813, 1635
MspA1I	CMGCKG	2 cut(s)	920, 1052
MspI	CCGG	6 cut(s)	111, 238, 363, 855, 1460, 2001
MspR9I	CCNGG	7 cut(s)	111, 112, 238, 239, 855, 1196, 2006
MunI	CAATTG	1 cut(s)	1335
MvaI	CCWGG	2 cut(s)	1196, 2006
MvnI	CGCG	1 cut(s)	1936
MwoI	GCNNNNNNNGC	7 cut(s)	149, 193, 248, 410, 864, 1058, 1931
NciI	CCSGG	5 cut(s)	111, 112, 238, 239, 855
NcoI	CCATGG	1 cut(s)	1985
NdeI	CATATG	1 cut(s)	617
NdeII	GATC	7 cut(s)	281, 721, 962, 1069, 1768, 1845, 1953
NheI	GCTAGC	1 cut(s)	820
NlaIII	CATG	8 cut(s)	16, 812, 844, 1434, 1634, 1759, 1766, 1989
NlaIV	GGNNCC	6 cut(s)	108, 212, 235, 1193, 1214, 1983
NmeAIII	GCCGAG	1 cut(s)	731
NmuCI	GTSAC	6 cut(s)	466, 512, 1613, 1789, 1813, 2008
NsiI	ATGCAT	1 cut(s)	490
NspI	RCATGY	2 cut(s)	812, 1766
NspV	TTCGAA	1 cut(s)	1877
PaeI	GCATGC	1 cut(s)	1766
PaeR7I	CTCGAG	1 cut(s)	1809
PagI	TCATGA	1 cut(s)	840
PcsI	WCGNNNNNNNCGW	1 cut(s)	68
PdmI	GAANNNNTTC	3 cut(s)	676, 1203, 2051
PfeI	GAWTC	5 cut(s)	52, 612, 672, 1308, 1997
PkrI	GCNGC	4 cut(s)	919, 1723, 1834, 2017
PleI	GAGTC	4 cut(s)	1576, 1786, 1820, 1984
PpsI	GAGTC	4 cut(s)	1576, 1786, 1820, 1984
PshAI	GACNNNNGTC	1 cut(s)	1052
Psp124BI	GAGCTC	1 cut(s)	1423
Psp6I	CCWGG	2 cut(s)	1194, 2004
PspGI	CCWGG	2 cut(s)	1194, 2004
PspN4I	GGNNCC	6 cut(s)	108, 212, 235, 1193, 1214, 1983
PspPI	GGNCC	3 cut(s)	1192, 1234, 1520
PstI	CTGCAG	1 cut(s)	2017
PsuI	RGATCY	3 cut(s)	281, 962, 1953
PvuII	CAGCTG	1 cut(s)	1052
RsaI	GTAC	1 cut(s)	778
RsaNI	GTAC	1 cut(s)	777
RseI	CAYNNNNRTG	3 cut(s)	620, 813, 1635
SacI	GAGCTC	1 cut(s)	1423
SalI	GTCGAC	1 cut(s)	1745
SaqAI	TTAA	2 cut(s)	999, 1448
SatI	GCNGC	4 cut(s)	918, 1722, 1833, 2016
Sau3AI	GATC	7 cut(s)	281, 721, 962, 1069, 1768, 1845, 1953
Sau96I	GGNCC	3 cut(s)	1192, 1234, 1520
ScaI	AGTACT	1 cut(s)	778
SchI	GAGTC	4 cut(s)	1577, 1786, 1821, 1984
ScrFI	CCNGG	7 cut(s)	111, 112, 238, 239, 855, 1196, 2006
SduI	GDGCHC	5 cut(s)	90, 1092, 1285, 1423, 1739
SfaNI	GCATC	5 cut(s)	497, 616, 1009, 1482, 1916
SfcI	CTRYAG	3 cut(s)	825, 1404, 2013
Sfr274I	CTCGAG	1 cut(s)	1809
SfuI	TTCGAA	1 cut(s)	1877
SinI	GGWCC	2 cut(s)	1234, 1520
SlaI	CTCGAG	1 cut(s)	1809
SmaI	CCCGGG	2 cut(s)	112, 239
SmiMI	CAYNNNNRTG	3 cut(s)	620, 813, 1635
SmlI	CTYRAG	4 cut(s)	1646, 1809, 2021, 2027
SmoI	CTYRAG	4 cut(s)	1646, 1809, 2021, 2027
SphI	GCATGC	1 cut(s)	1766
Sse9I	AATT	7 cut(s)	45, 911, 996, 1062, 1335, 1449, 1653
SsiI	CCGC	5 cut(s)	208, 836, 920, 1424, 1865
SspI	AATATT	1 cut(s)	1128
SspMI	CTAG	7 cut(s)	215, 578, 596, 821, 1118, 1247, 1706
SstI	GAGCTC	1 cut(s)	1423
StyD4I	CCNGG	7 cut(s)	109, 110, 236, 237, 853, 1194, 2004
StyI	CCWWGG	4 cut(s)	789, 859, 1705, 1985
TaaI	ACNGT	6 cut(s)	472, 544, 604, 1042, 1661, 1787
TaiI	ACGT	2 cut(s)	989, 1746
TaqI	TCGA	8 cut(s)	62, 192, 1078, 1411, 1746, 1810, 1877, 1968
TasI	AATT	7 cut(s)	45, 911, 996, 1062, 1335, 1449, 1653
TatI	WGTACW	1 cut(s)	776
TfiI	GAWTC	5 cut(s)	52, 612, 672, 1308, 1997
Tru1I	TTAA	2 cut(s)	999, 1448
Tru9I	TTAA	2 cut(s)	999, 1448
TscAI	CASTG	7 cut(s)	475, 525, 609, 649, 1363, 1737, 2017
TseFI	GTSAC	6 cut(s)	466, 512, 1613, 1789, 1813, 2008
TseI	GCWGC	4 cut(s)	917, 1721, 1832, 2015
Tsp45I	GTSAC	6 cut(s)	466, 512, 1613, 1789, 1813, 2008
TspDTI	ATGAA	5 cut(s)	287, 1300, 1566, 1619, 1766
TspGWI	ACGGA	3 cut(s)	545, 957, 1226
TspMI	CCCGGG	2 cut(s)	110, 237
TspRI	CASTG	7 cut(s)	475, 525, 609, 649, 1363, 1737, 2017
VpaK11BI	GGWCC	2 cut(s)	1234, 1520
XagI	CCTNNNNNAGG	1 cut(s)	1709
XbaI	TCTAGA	1 cut(s)	577
XceI	RCATGY	2 cut(s)	812, 1766
XhoI	CTCGAG	1 cut(s)	1809
XmaI	CCCGGG	2 cut(s)	110, 237
XmaJI	CCTAGG	1 cut(s)	1705
XmiI	GTMKAC	2 cut(s)	764, 1746
XmnI	GAANNNNTTC	3 cut(s)	676, 1203, 2051
XspI	CTAG	7 cut(s)	215, 578, 596, 821, 1118, 1247, 1706
ZrmI	AGTACT	1 cut(s)	778
Zsp2I	ATGCAT	1 cut(s)	490

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.