pycom15g38840

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0016920
Physical Location & Seq
Forward (+)
38583098 .. 38585002
1905 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1905 bp
ATGTTTGCCTACAAACCCAAATCCCTCTTCCCATCTCTTCCAAAACACATTTCAAATTCCCTACTTTCTCACTCCTCCTCCTCCTCCTCACTTGTCTCTGCACTGCCGCCGCGCCCTTCACTCCGCCAAACCAAGCAAGCCCATGCTCACATCATCGTCTCCGGCCACGCCGCCTACTCTCCCATCCTTTCCCATCTCCTCTGCCTCCTCTCTCTCTCCCCAACTACTACATTTCACTACTCCCTCTCTCTCTACCGTTCCATCAAATACCCATCTGTTTTCGCCACCAATAACATGATCCGCTGCTTCGCAAAGAGCGATTCGCCTCTCCTTTCCCTGCTTCTCTTTTCCTCCTTCATGCTGCGATCCTACGTCAAGCCCAACAACCATACTTTTACTTTTCTGCTTCAAGCTTGCAGCAAGGCTATGGCTCTCACTGAAGGAGCTCAGGTTCATGCCATTGTTGTAAAACTTGGTTTTGGCGGGTATGTTTTCGTGAGGAATGCTTTGATTCATTTGTACTGTTCTTGCTGTAGAATTGAATGCTCGAAACGGGTGTTTGAGGAGAATGTTAGTTCCCGAGATGTGGTTACTTGGAACTCAATGCTGACTGCTTTTGTAAGGGACGAGCAGATTGGTGTTGCAGAGAAGCTGTTTGAGGAAATGCCCGAGAGAGATGTGATCTCGTGGAGTACGATGATCTCGGGTTACGTGCAAAATGGGCGGTTAGAACAAGGGTTGGAATGCTTTAAACGGTTGAAGGAGGAAGGGATTAGGGTGAATGAGGCCACATTAGTCTCTGTTCTTTCAGCGTCCGCGCAATTGGGGTTGCTCGAACATGGTAGATTAGTTCACTCCCTTGCTGAGTCTTTGAATTTTCCGTTGACTGCTTGCCTCGGCACAGCTCTGATTGACATGTATGCAAAATGTGGATGCATCGAACAGTCTAAGCTCTTGTTTAAAAACATGCCCCAGAGAGACATTTGGACATGGAATGTCATGATCTGCGGATTGGCATCACATGGCCTTGGGAAGGAAGCACTTGCACTTTTTGACAGGTTCGTTGATGAGGGTTTCCGTCCCGCAAATGTGACTTTCATTGGTGTCTTGGGTGCCTGTAGTAGAGCAGGTTTGGTAAGCGAAGGAAGACGTCATTTTAAGTTGATGACGGAAAAGTATGGCATATTACCTGAGATGGAGCATTATGGGTGCATGGTTGATATCTTGGGCCGTGCAGGATTTGTAGATGAAGCTGTTGAGTTGATTGAGAAGATGACGGTTTCCCCAGATCCTGTATTATGGGCAACACTCCTTGGTGCCTGTAAGATACATGGATCAATAGAATTGGGTGAAAAGATTGGGAACAAATTACTAGAACTGGATCCAACCCATGACGGGCATTATGTACAACTAGCCAATATATATGCAAAAGCAAGGAAATGGGAAGACGTTGTGAGAGTTCGGAGATTAATGGTTGAGCAAAATACTAATAAAGCTGCAGGTTGGAGCTTGATTGAAGCACACGGTAAGGTTCATAAATTTGTTGCAGGGGATAGAGAGCACGAACGCTCTCTAGAGATTCACAAAATGCTGGAGACAATTGGAACACGAATAGCAGAAGCCGGCTACTCACCGAATGTCACATCAGTTTTGCATGATATAGGGGAGGAAGAAAAAGAGAACGTTATAAAGGAGCACAGCGAGCGGCTTGCAATGGCTTTTGGCCTGTTAGTGACAGAGGCTGGGGATTGCATCCGAATCATGAAGAATTTGAGAGTTTGTGAGGATTGTCATGAGGTAAGCAAGATAATTTCGAAGGTGTTTGAGAGAGAAATTATAGTGAGGGATGGAAGCAGATTTCACCATTTCAAGGACGGAAAATGTTCCTGCCTTGATTATTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

635

Amino Acids

70.97

Weight (kDa)

7.81

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 194 - 226 8.7e-07 PPR repeat family
PPR_2 PF13041 225 - 271 3.6e-08 PPR repeat family
PPR PF01535 228 - 258 5.6e-08 PPR repeat
PPR_2 PF13041 327 - 374 2.3e-06 PPR repeat family
PPR PF01535 330 - 359 3.1e-06 PPR repeat
E_motif PF20431 444 - 506 1.1e-16 E motif
DYW_deaminase PF14432 542 - 634 3.5e-42 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016920)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17040
malus_domestica MD15G1440600.v1.1
prunus_persica Prupe.1G582700_v2.0.a1 Prupe.1G582700_v2.0.a1
pyrus_communis pycom15g38840
rosa_chinensis RchiOBHm_Chr7g0220271
rosa_laevigata RLG00000002244
rosa_multiflora Rmu_sc0001136.1_g000028
rosa_roxburghii Rroxscaffold_3G00239660
rosa_rugosa Rorug07G0191700
rosa_samantha Rh7AG333700 Rh7BG323400 Rh7CG351300
rosa_wichuraiana Rw7G028150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1688
AatII GACGTC 1 cut(s) 1153
Acc36I ACCTGC 2 cut(s) 1118, 1490
AccB1I GGYRCC 2 cut(s) 1112, 1316
AccBSI CCGCTC 1 cut(s) 1705
AccII CGCG 2 cut(s) 112, 818
AclI AACGTT 1 cut(s) 1683
AclWI GGATC 6 cut(s) 292, 360, 1283, 1342, 1376, 1389
AcoI YGGCCR 1 cut(s) 163
AcsI RAATTY 4 cut(s) 55, 874, 1538, 1768
AcuI CTGAAG 1 cut(s) 459
AcyI GRCGYC 1 cut(s) 1150
AfaI GTAC 3 cut(s) 521, 694, 1407
AfiI CCNNNNNNNGG 4 cut(s) 586, 1033, 1395, 1870
AflIII ACRYGT 1 cut(s) 915
AgsI TTSAA 7 cut(s) 54, 410, 542, 760, 874, 1517, 1870
AjuI GAANNNNNNNTTGG 4 cut(s) 11, 34, 43, 66
AloI GAACNNNNNNTCC 2 cut(s) 435, 467
AluBI AGCT 8 cut(s) 413, 446, 652, 905, 952, 1253, 1496, 1509
AluI AGCT 8 cut(s) 413, 446, 652, 905, 952, 1253, 1496, 1509
Alw21I GWGCWC 3 cut(s) 448, 1563, 1698
Alw26I GTCTC 5 cut(s) 100, 163, 802, 972, 1589
AlwI GGATC 6 cut(s) 292, 360, 1283, 1342, 1376, 1389
AlwNI CAGNNNCTG 2 cut(s) 1292, 1742
Ama87I CYCGRG 3 cut(s) 579, 668, 703
AoxI GGCC 5 cut(s) 163, 786, 1024, 1228, 1723
ApeKI GCWGC 4 cut(s) 303, 361, 417, 1496
ApoI RAATTY 4 cut(s) 55, 874, 1538, 1768
AseI ATTAAT 1 cut(s) 1469
Asp700I GAANNNNTTC 1 cut(s) 1882
AspLEI GCGC 2 cut(s) 114, 820
AspS9I GGNCC 1 cut(s) 1228
AsuHPI GGTGA 4 cut(s) 790, 1361, 1623, 1853
AsuII TTCGAA 1 cut(s) 1814
AvaI CYCGRG 3 cut(s) 579, 668, 703
BamHI GGATCC 1 cut(s) 1381
BanI GGYRCC 2 cut(s) 1112, 1316
BanII GRGCYC 1 cut(s) 448
BauI CACGAG 1 cut(s) 685
BbsI GAAGAC 2 cut(s) 1153, 1452
Bbv12I GWGCWC 3 cut(s) 448, 1563, 1698
BbvI GCAGC 4 cut(s) 290, 348, 429, 1483
BccI CCATC 7 cut(s) 40, 191, 201, 269, 280, 1189, 1841
BceAI ACGGC 1 cut(s) 1215
BcgI CGANNNNNNTGC 2 cut(s) 1691, 1725
BcoDI GTCTC 5 cut(s) 100, 163, 802, 972, 1589
BfaI CTAG 3 cut(s) 1373, 1412, 1574
BfmI CTRYAG 3 cut(s) 532, 1117, 1497
BfuAI ACCTGC 2 cut(s) 1118, 1490
BisI GCNGC 8 cut(s) 107, 110, 171, 304, 362, 418, 1497, 1706
BlsI GCNGC 8 cut(s) 108, 111, 172, 305, 363, 419, 1498, 1707
BmeT110I CYCGRG 3 cut(s) 579, 668, 703
BmgT120I GGNCC 1 cut(s) 1228
BmiI GGNNCC 3 cut(s) 1114, 1318, 1383
BmsI GCATC 4 cut(s) 923, 945, 1025, 1761
BpiI GAAGAC 2 cut(s) 1153, 1452
BpmI CTGGAG 1 cut(s) 1613
Bpu10I CCTNAGC 1 cut(s) 447
Bpu14I TTCGAA 1 cut(s) 1814
BsaAI YACGTR 1 cut(s) 712
BsaBI GATNNNNATC 1 cut(s) 1015
BsaHI GRCGYC 1 cut(s) 1150
BsaJI CCNNGG 3 cut(s) 895, 1027, 1312
BsaXI ACNNNNNCTCC 4 cut(s) 62, 92, 435, 465
Bsc4I CCNNNNNNNGG 4 cut(s) 586, 1033, 1395, 1870
Bse118I RCCGGY 1 cut(s) 1622
Bse1I ACTGG 1 cut(s) 1383
Bse3DI GCAATG 1 cut(s) 1719
Bse8I GATNNNNATC 1 cut(s) 1015
BseDI CCNNGG 3 cut(s) 895, 1027, 1312
BseGI GGATG 4 cut(s) 183, 938, 1752, 1852
BseJI GATNNNNATC 1 cut(s) 1015
BseLI CCNNNNNNNGG 4 cut(s) 586, 1033, 1395, 1870
BseMI GCAATG 1 cut(s) 1719
BseMII CTCAG 3 cut(s) 461, 855, 1182
BseNI ACTGG 1 cut(s) 1383
BseRI GAGGAG 8 cut(s) 64, 67, 70, 73, 76, 188, 197, 578
BseXI GCAGC 4 cut(s) 290, 348, 429, 1483
BseYI CCCAGC 1 cut(s) 1742
BsgI GTGCAG 2 cut(s) 84, 1254
Bsh1236I CGCG 2 cut(s) 112, 818
BshFI GGCC 5 cut(s) 165, 788, 1026, 1230, 1725
BshNI GGYRCC 2 cut(s) 1112, 1316
BsiHKAI GWGCWC 3 cut(s) 448, 1563, 1698
BsiHKCI CYCGRG 3 cut(s) 579, 668, 703
BsiSI CCGG 2 cut(s) 162, 1623
BslFI GGGAC 2 cut(s) 638, 1065
BslI CCNNNNNNNGG 4 cut(s) 586, 1033, 1395, 1870
BsmAI GTCTC 5 cut(s) 100, 163, 802, 972, 1589
BsmBI CGTCTC 1 cut(s) 163
BsmFI GGGAC 2 cut(s) 638, 1065
BsmI GAATGC 3 cut(s) 508, 548, 749
BsnI GGCC 5 cut(s) 165, 788, 1026, 1230, 1725
BsoBI CYCGRG 3 cut(s) 579, 668, 703
Bsp119I TTCGAA 1 cut(s) 1814
Bsp1286I GDGCHC 3 cut(s) 448, 1563, 1698
Bsp1407I TGTACA 1 cut(s) 1405
Bsp143I GATC 8 cut(s) 297, 365, 681, 699, 1002, 1288, 1334, 1381
BspANI GGCC 5 cut(s) 165, 788, 1026, 1230, 1725
BspCNI CTCAG 3 cut(s) 460, 856, 1183
BspFNI CGCG 2 cut(s) 112, 818
BspHI TCATGA 3 cut(s) 999, 1761, 1792
BspLI GGNNCC 3 cut(s) 1114, 1318, 1383
BspMAI CTGCAG 1 cut(s) 1501
BspMI ACCTGC 2 cut(s) 1118, 1490
BspPI GGATC 6 cut(s) 292, 360, 1283, 1342, 1376, 1389
BspT104I TTCGAA 1 cut(s) 1814
BspT107I GGYRCC 2 cut(s) 1112, 1316
BsrBI CCGCTC 1 cut(s) 1705
BsrDI GCAATG 1 cut(s) 1719
BsrFI RCCGGY 1 cut(s) 1622
BsrGI TGTACA 1 cut(s) 1405
BsrI ACTGG 1 cut(s) 1383
BssAI RCCGGY 1 cut(s) 1622
BssECI CCNNGG 3 cut(s) 895, 1027, 1312
BssMI GATC 8 cut(s) 297, 365, 681, 699, 1002, 1288, 1334, 1381
BssNI GRCGYC 1 cut(s) 1150
BssSI CACGAG 1 cut(s) 685
BssT1I CCWWGG 2 cut(s) 1027, 1312
Bst2BI CACGAG 1 cut(s) 685
Bst4CI ACNGT 6 cut(s) 257, 524, 756, 945, 1279, 1526
Bst6I CTCTTC 2 cut(s) 32, 42
BstACI GRCGYC 1 cut(s) 1150
BstAUI TGTACA 1 cut(s) 1405
BstBAI YACGTR 1 cut(s) 712
BstBI TTCGAA 1 cut(s) 1814
BstC8I GCNNGC 6 cut(s) 138, 415, 892, 1624, 1703, 1710
BstDEI CTNAG 4 cut(s) 447, 864, 948, 1191
BstENI CCTNNNNNAGG 1 cut(s) 1031
BstF5I GGATG 4 cut(s) 183, 938, 1752, 1852
BstFNI CGCG 2 cut(s) 112, 818
BstHHI GCGC 2 cut(s) 114, 820
BstKTI GATC 8 cut(s) 300, 368, 684, 702, 1005, 1291, 1337, 1384
BstMAI GTCTC 5 cut(s) 100, 163, 802, 972, 1589
BstMBI GATC 8 cut(s) 297, 365, 681, 699, 1002, 1288, 1334, 1381
BstMWI GCNNNNNNNGC 2 cut(s) 721, 1702
BstNSI RCATGY 2 cut(s) 919, 970
BstSFI CTRYAG 3 cut(s) 532, 1117, 1497
BstUI CGCG 2 cut(s) 112, 818
BstV1I GCAGC 4 cut(s) 290, 348, 429, 1483
BstV2I GAAGAC 2 cut(s) 1153, 1452
BstX2I RGATCY 2 cut(s) 1288, 1381
BstYI RGATCY 2 cut(s) 1288, 1381
BsuRI GGCC 5 cut(s) 165, 788, 1026, 1230, 1725
BtsCI GGATG 4 cut(s) 183, 938, 1752, 1852
BtsI GCAGTG 1 cut(s) 101
BtsIMutI CAGTG 2 cut(s) 101, 435
BveI ACCTGC 2 cut(s) 1118, 1490
Cac8I GCNNGC 6 cut(s) 138, 415, 892, 1624, 1703, 1710
CaiI CAGNNNCTG 2 cut(s) 1292, 1742
CciI TCATGA 3 cut(s) 999, 1761, 1792
CfoI GCGC 2 cut(s) 114, 820
Cfr10I RCCGGY 1 cut(s) 1622
Cfr13I GGNCC 1 cut(s) 1228
CseI GACGC 1 cut(s) 801
Csp6I GTAC 3 cut(s) 520, 693, 1406
CviQI GTAC 3 cut(s) 520, 693, 1406
DdeI CTNAG 4 cut(s) 447, 864, 948, 1191
DpnI GATC 8 cut(s) 299, 367, 683, 701, 1004, 1290, 1336, 1383
DpnII GATC 8 cut(s) 297, 365, 681, 699, 1002, 1288, 1334, 1381
DraI TTTAAA 2 cut(s) 751, 961
EaeI YGGCCR 1 cut(s) 163
Eam1104I CTCTTC 2 cut(s) 32, 42
EarI CTCTTC 2 cut(s) 32, 42
EciI GGCGGA 1 cut(s) 113
Ecl136II GAGCTC 1 cut(s) 446
Eco130I CCWWGG 2 cut(s) 1027, 1312
Eco24I GRGCYC 1 cut(s) 448
Eco32I GATATC 1 cut(s) 1222
Eco53kI GAGCTC 1 cut(s) 446
Eco57I CTGAAG 1 cut(s) 459
Eco88I CYCGRG 3 cut(s) 579, 668, 703
EcoICRI GAGCTC 1 cut(s) 446
EcoNI CCTNNNNNAGG 1 cut(s) 1031
EcoRV GATATC 1 cut(s) 1222
EcoT14I CCWWGG 2 cut(s) 1027, 1312
EcoT22I ATGCAT 1 cut(s) 938
EcoT38I GRGCYC 1 cut(s) 448
ErhI CCWWGG 2 cut(s) 1027, 1312
Esp3I CGTCTC 1 cut(s) 163
FaqI GGGAC 2 cut(s) 638, 1065
FauI CCCGC 2 cut(s) 476, 1090
Fnu4HI GCNGC 8 cut(s) 107, 110, 171, 304, 362, 418, 1497, 1706
FokI GGATG 4 cut(s) 170, 945, 1739, 1859
FriOI GRGCYC 1 cut(s) 448
Fsp4HI GCNGC 8 cut(s) 107, 110, 171, 304, 362, 418, 1497, 1706
FspBI CTAG 3 cut(s) 1373, 1412, 1574
GlaI GCGC 2 cut(s) 113, 819
GluI GCNGC 8 cut(s) 107, 110, 171, 304, 362, 418, 1497, 1706
GsaI CCCAGC 1 cut(s) 1746
GsuI CTGGAG 1 cut(s) 1613
HaeIII GGCC 5 cut(s) 165, 788, 1026, 1230, 1725
HapII CCGG 2 cut(s) 162, 1623
HgaI GACGC 1 cut(s) 801
HhaI GCGC 2 cut(s) 114, 820
Hin1I GRCGYC 1 cut(s) 1150
Hin6I GCGC 2 cut(s) 112, 818
HinP1I GCGC 2 cut(s) 112, 818
HincII GTYRAC 1 cut(s) 885
HindII GTYRAC 1 cut(s) 885
HindIII AAGCTT 1 cut(s) 411
HinfI GANTC 5 cut(s) 320, 511, 866, 1579, 1758
HpaII CCGG 2 cut(s) 162, 1623
HphI GGTGA 4 cut(s) 790, 1361, 1623, 1853
Hpy166II GTNNAC 2 cut(s) 853, 885
Hpy188I TCNGA 3 cut(s) 909, 1464, 1757
Hpy188III TCNNGA 6 cut(s) 496, 579, 1000, 1574, 1762, 1793
Hpy8I GTNNAC 2 cut(s) 853, 885
HpyAV CCTTC 8 cut(s) 126, 364, 434, 754, 761, 1027, 1136, 1810
HpyCH4III ACNGT 6 cut(s) 257, 524, 756, 945, 1279, 1526
HpyCH4IV ACGT 5 cut(s) 372, 711, 1150, 1449, 1683
HpyF10VI GCNNNNNNNGC 2 cut(s) 721, 1702
HpyF3I CTNAG 4 cut(s) 447, 864, 948, 1191
HpySE526I ACGT 5 cut(s) 372, 711, 1150, 1449, 1683
Hsp92I GRCGYC 1 cut(s) 1150
HspAI GCGC 2 cut(s) 112, 818
KroI GCCGGC 1 cut(s) 1622
KroNI GCCGGC 1 cut(s) 1624
Kzo9I GATC 8 cut(s) 297, 365, 681, 699, 1002, 1288, 1334, 1381
LmnI GCTCC 4 cut(s) 443, 1198, 1506, 1693
Lsp1109I GCAGC 4 cut(s) 290, 348, 429, 1483
LweI GCATC 4 cut(s) 923, 945, 1025, 1761
MaeI CTAG 3 cut(s) 1373, 1412, 1574
MaeII ACGT 5 cut(s) 372, 711, 1150, 1449, 1683
MaeIII GTNAC 5 cut(s) 589, 707, 1090, 1639, 1732
MalI GATC 8 cut(s) 299, 367, 683, 701, 1004, 1290, 1336, 1383
MbiI CCGCTC 1 cut(s) 1705
MboI GATC 8 cut(s) 297, 365, 681, 699, 1002, 1288, 1334, 1381
MboII GAAGA 7 cut(s) 19, 29, 1158, 1282, 1457, 1682, 1777
MfeI CAATTG 2 cut(s) 821, 1599
MflI RGATCY 2 cut(s) 1288, 1381
MhlI GDGCHC 3 cut(s) 448, 1563, 1698
MlyI GAGTC 1 cut(s) 875
MmeI TCCRAC 3 cut(s) 720, 1409, 1484
Mph1103I ATGCAT 1 cut(s) 938
MroNI GCCGGC 1 cut(s) 1622
MroXI GAANNNNTTC 1 cut(s) 1882
MseI TTAA 4 cut(s) 750, 960, 1158, 1469
MspA1I CMGCKG 1 cut(s) 303
MspI CCGG 2 cut(s) 162, 1623
MunI CAATTG 2 cut(s) 821, 1599
Mva1269I GAATGC 3 cut(s) 508, 548, 749
MvnI CGCG 2 cut(s) 112, 818
MwoI GCNNNNNNNGC 2 cut(s) 721, 1702
NaeI GCCGGC 1 cut(s) 1624
NdeII GATC 8 cut(s) 297, 365, 681, 699, 1002, 1288, 1334, 1381
NgoMIV GCCGGC 1 cut(s) 1622
NlaIV GGNNCC 3 cut(s) 1114, 1318, 1383
NmeAIII GCCGAG 1 cut(s) 876
NmuCI GTSAC 3 cut(s) 1090, 1639, 1732
NsiI ATGCAT 1 cut(s) 938
NspI RCATGY 2 cut(s) 919, 970
NspV TTCGAA 1 cut(s) 1814
PagI TCATGA 3 cut(s) 999, 1761, 1792
PciI ACATGT 1 cut(s) 915
PcsI WCGNNNNNNNCGW 2 cut(s) 315, 692
PctI GAATGC 3 cut(s) 508, 548, 749
PdiI GCCGGC 1 cut(s) 1624
PdmI GAANNNNTTC 1 cut(s) 1882
PfeI GAWTC 4 cut(s) 320, 511, 1579, 1758
PkrI GCNGC 8 cut(s) 108, 111, 172, 305, 363, 419, 1498, 1707
PleI GAGTC 1 cut(s) 874
PpsI GAGTC 1 cut(s) 874
Ppu21I YACGTR 1 cut(s) 712
PscI ACATGT 1 cut(s) 915
PshBI ATTAAT 1 cut(s) 1469
PsiI TTATAA 1 cut(s) 1688
Psp124BI GAGCTC 1 cut(s) 448
Psp1406I AACGTT 1 cut(s) 1683
PspFI CCCAGC 1 cut(s) 1742
PspN4I GGNNCC 3 cut(s) 1114, 1318, 1383
PspPI GGNCC 1 cut(s) 1228
PstI CTGCAG 1 cut(s) 1501
PstNI CAGNNNCTG 2 cut(s) 1292, 1742
PsuI RGATCY 2 cut(s) 1288, 1381
RsaI GTAC 3 cut(s) 521, 694, 1407
RsaNI GTAC 3 cut(s) 520, 693, 1406
SacI GAGCTC 1 cut(s) 448
SaqAI TTAA 4 cut(s) 750, 960, 1158, 1469
SatI GCNGC 8 cut(s) 107, 110, 171, 304, 362, 418, 1497, 1706
Sau3AI GATC 8 cut(s) 297, 365, 681, 699, 1002, 1288, 1334, 1381
Sau96I GGNCC 1 cut(s) 1228
SchI GAGTC 1 cut(s) 875
SduI GDGCHC 3 cut(s) 448, 1563, 1698
SfaNI GCATC 4 cut(s) 923, 945, 1025, 1761
SfcI CTRYAG 3 cut(s) 532, 1117, 1497
SfuI TTCGAA 1 cut(s) 1814
SspMI CTAG 3 cut(s) 1373, 1412, 1574
SstI GAGCTC 1 cut(s) 448
StyI CCWWGG 2 cut(s) 1027, 1312
TaaI ACNGT 6 cut(s) 257, 524, 756, 945, 1279, 1526
TaiI ACGT 5 cut(s) 375, 714, 1153, 1452, 1686
TaqI TCGA 4 cut(s) 548, 834, 939, 1814
TatI WGTACW 2 cut(s) 519, 1405
TauI GCSGC 4 cut(s) 109, 112, 173, 1708
TfiI GAWTC 4 cut(s) 320, 511, 1579, 1758
Tru1I TTAA 4 cut(s) 750, 960, 1158, 1469
Tru9I TTAA 4 cut(s) 750, 960, 1158, 1469
TscAI CASTG 2 cut(s) 108, 442
TseFI GTSAC 3 cut(s) 1090, 1639, 1732
TseI GCWGC 4 cut(s) 303, 361, 417, 1496
Tsp45I GTSAC 3 cut(s) 1090, 1639, 1732
TspDTI ATGAA 7 cut(s) 346, 443, 503, 1087, 1263, 1523, 1778
TspGWI ACGGA 4 cut(s) 870, 1067, 1184, 1890
TspRI CASTG 2 cut(s) 108, 442
VspI ATTAAT 1 cut(s) 1469
XagI CCTNNNNNAGG 1 cut(s) 1031
XapI RAATTY 4 cut(s) 55, 874, 1538, 1768
XbaI TCTAGA 1 cut(s) 1573
XceI RCATGY 2 cut(s) 919, 970
XmnI GAANNNNTTC 1 cut(s) 1882
XspI CTAG 3 cut(s) 1373, 1412, 1574
ZraI GACGTC 1 cut(s) 1151
Zsp2I ATGCAT 1 cut(s) 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.