pycom16g08260
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
5459244 .. 5462669
3426 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g08260.9

Sequence Viewer

Length: 1476 bp
ATGAAGATAGAAAAAGACTACATGGGAAGAAGTAATTTCATGTTGTGCAAATTGGGTTTACTTGTTTTGGCATTGGCTGAGGCCTCTTCTGCAACTCTTTCCCCTACTGGTGTAAATTATGAAGTTGAAGCTTTGGCGGCCATTAAAAGTGATCTGATTGACCCGCATAATGTTTTGGAGAACTGGGATAGTAACTCTGTAGATCCCTGCAGCTGGAGGATGGTTACTTGTACTCCTGATGGCTATGTATCTGCTCTGGGATTGCCTAGCCAGAGCTTGTCCGGTATCTTATCTCCGGCGATTGGAAACCTCAGTAACTTGCAATCTGTTTTGCTTCAAAACAATGCGATTTCGGGTCCAATTCCCGCTTCAATTGGAAATTTGGTGAAGCTTCAGACACTTGATCTATCCAACAATAATTTCAATGGTGACATACCAGATTCTTTGGGCAACCTAAAGAACCTGAATTATTTGCGGTTAAACAACAACAGCCTTACAGGACCCTTCCCCAAGTCTCTGTCCGCAGTTGGTCTCACTCTTGTGGACCTTTCTTTCAACAATTTGAGCGGTTCCTTGCCAAAGATATCCGCACGAACTTTCAAAATTGTTGGAAACCCTTTAATTTGTGGCGTAAAGGCTGCGAACTGTTCTGCTGTCTTTCCAGAGCCACTATCCTTCACACCAGATGCTCTAAAAGAATCAGACTCTGGAACCAAACGCCGCCACATGACTATTATCCTTGGTGCAAGCTTCAGTGCTGTCTTTGGCGTCATAATAATTATTGGGTTACTTGTTTGGCTGCGATACAGACACAACCAGCAGATATTCTTCGATGTCAATGCAGACCAATATGACCCAGAAGTTTGCTTGGGGCATTTGAGGAGGTATACATTTAAGGAGCTCCGGGCAGCAACAGACCATTTCAACTCGAAGAACATCCTAGGTAGGGGCGGTTTTGGGATTGTATACAAAGGAAGCTTGAATGACGGTACTCTGGTTGCAGTTAAAAGGCTAAAGGACTACAACACTGCTGGTGGTGAAATCCAATTTCAGACAGAAGTTGAGATGATTAGTTTGGCTGTCCATCGAAATCTTCTGCGGCTTTGCGGGTTCTGCTCAACTGAGAACGAAAGACTTCTTGTTTACCCTTTTATGCCTAACGGAAGCGTAGCCTCTCGATTAAGAGATCATATACATGGTCGACCAGCACTAGACTGGGCAAGGCGAAAGAGAATAGCGTTAGGTACAGCAAGGGGGTTGGTTTATTTGCATGAGCAGTGTGACCCCAGAATTATTCACCGTGATGTTAAAGCAGCCAACATTTTGCTTGATGAAGACTTCGAGGCAGTTGTTGGAGATTTTGGGTTGGCAAGTTCAGCTTTTGGATCACAGAGAATCTCATGTGACCACAGCTGTGCGCGGCACTGTTGGCCACATCGCTCCAGAATACTTGTCAACAGGTCAGTCTTCAGATAA

Protein Analysis

492

Amino Acids

53.88

Weight (kDa)

8.76

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 567
AccI GTMKAC 3 cut(s) 887, 966, 1201
AccII CGCG 1 cut(s) 1420
AclWI GGATC 2 cut(s) 197, 1393
AcoI YGGCCR 2 cut(s) 138, 1430
AcsI RAATTY 1 cut(s) 379
AcuI CTGAAG 3 cut(s) 377, 736, 1453
AcyI GRCGYC 1 cut(s) 768
AfaI GTAC 3 cut(s) 232, 991, 1246
AfiI CCNNNNNNNGG 3 cut(s) 213, 302, 946
AgsI TTSAA 8 cut(s) 128, 338, 372, 424, 556, 601, 925, 982
AjuI GAANNNNNNNTTGG 4 cut(s) 352, 384, 404, 436
AleI CACNNNNGTG 2 cut(s) 539, 1413
AluBI AGCT 9 cut(s) 131, 213, 276, 391, 750, 901, 978, 1379, 1413
AluI AGCT 9 cut(s) 131, 213, 276, 391, 750, 901, 978, 1379, 1413
Alw21I GWGCWC 1 cut(s) 903
Alw26I GTCTC 2 cut(s) 519, 536
AlwI GGATC 2 cut(s) 197, 1393
AlwNI CAGNNNCTG 1 cut(s) 707
AoxI GGCC 3 cut(s) 81, 138, 1430
ApeKI GCWGC 5 cut(s) 210, 638, 799, 908, 1313
ApoI RAATTY 1 cut(s) 379
Asp700I GAANNNNTTC 1 cut(s) 1134
AspA2I CCTAGG 1 cut(s) 940
AspLEI GCGC 1 cut(s) 1420
AspS9I GGNCC 3 cut(s) 356, 500, 544
AsuC2I CCSGG 1 cut(s) 905
AsuHPI GGTGA 4 cut(s) 397, 440, 1049, 1289
AvaII GGWCC 3 cut(s) 356, 500, 544
AvrII CCTAGG 1 cut(s) 940
BaeI ACNNNNGTAYC 2 cut(s) 981, 1014
BalI TGGCCA 1 cut(s) 1432
BanII GRGCYC 1 cut(s) 903
BbsI GAAGAC 2 cut(s) 1341, 1459
Bbv12I GWGCWC 1 cut(s) 903
BbvCI CCTCAGC 1 cut(s) 78
BbvI GCAGC 5 cut(s) 222, 625, 786, 920, 1325
BccI CCATC 3 cut(s) 214, 233, 1092
BcgI CGANNNNNNTGC 2 cut(s) 821, 855
BcnI CCSGG 1 cut(s) 905
BcoDI GTCTC 2 cut(s) 519, 536
BfaI CTAG 3 cut(s) 267, 941, 1211
BfmI CTRYAG 2 cut(s) 198, 208
BisI GCNGC 9 cut(s) 138, 211, 639, 721, 800, 909, 1100, 1314, 1421
BlnI CCTAGG 1 cut(s) 940
BlsI GCNGC 9 cut(s) 139, 212, 640, 722, 801, 910, 1101, 1315, 1422
Bme1390I CCNGG 1 cut(s) 905
Bme18I GGWCC 3 cut(s) 356, 500, 544
BmgT120I GGNCC 3 cut(s) 356, 500, 544
BmiI GGNNCC 4 cut(s) 357, 502, 571, 712
BmrFI CCNGG 1 cut(s) 905
BmrI ACTGGG 2 cut(s) 193, 1225
BmsI GCATC 1 cut(s) 676
BmuI ACTGGG 2 cut(s) 193, 1225
BpiI GAAGAC 2 cut(s) 1341, 1459
BpmI CTGGAG 2 cut(s) 235, 1426
Bpu10I CCTNAGC 1 cut(s) 78
BpuMI CCSGG 1 cut(s) 905
BsaHI GRCGYC 1 cut(s) 768
BsaI GGTCTC 1 cut(s) 536
BsaJI CCNNGG 2 cut(s) 739, 940
BsaWI WCCGGW 1 cut(s) 281
BsaXI ACNNNNNCTCC 2 cut(s) 217, 247
Bsc4I CCNNNNNNNGG 3 cut(s) 213, 302, 946
Bse1I ACTGG 3 cut(s) 112, 188, 1220
BseDI CCNNGG 2 cut(s) 739, 940
BseGI GGATG 2 cut(s) 225, 936
BseLI CCNNNNNNNGG 3 cut(s) 213, 302, 946
BseMII CTCAG 3 cut(s) 69, 325, 1113
BseNI ACTGG 3 cut(s) 112, 188, 1220
BseRI GAGGAG 1 cut(s) 895
BseXI GCAGC 5 cut(s) 222, 625, 786, 920, 1325
Bsh1236I CGCG 1 cut(s) 1420
BshFI GGCC 3 cut(s) 83, 140, 1432
BsiHKAI GWGCWC 1 cut(s) 903
BsiSI CCGG 3 cut(s) 282, 296, 904
BslI CCNNNNNNNGG 3 cut(s) 213, 302, 946
BsmAI GTCTC 2 cut(s) 519, 536
BsnI GGCC 3 cut(s) 83, 140, 1432
Bso31I GGTCTC 1 cut(s) 536
Bsp1286I GDGCHC 1 cut(s) 903
Bsp143I GATC 5 cut(s) 151, 202, 403, 1186, 1385
BspANI GGCC 3 cut(s) 83, 140, 1432
BspCNI CTCAG 3 cut(s) 70, 324, 1114
BspFNI CGCG 1 cut(s) 1420
BspLI GGNNCC 4 cut(s) 357, 502, 571, 712
BspMAI CTGCAG 1 cut(s) 212
BspPI GGATC 2 cut(s) 197, 1393
BspTNI GGTCTC 1 cut(s) 536
BsrBI CCGCTC 1 cut(s) 567
BsrI ACTGG 3 cut(s) 112, 188, 1220
BssECI CCNNGG 2 cut(s) 739, 940
BssMI GATC 5 cut(s) 151, 202, 403, 1186, 1385
BssNAI GTATAC 2 cut(s) 888, 967
BssNI GRCGYC 1 cut(s) 768
BssT1I CCWWGG 2 cut(s) 739, 940
Bst1107I GTATAC 2 cut(s) 888, 967
Bst4CI ACNGT 4 cut(s) 647, 989, 1301, 1427
Bst6I CTCTTC 1 cut(s) 91
BstACI GRCGYC 1 cut(s) 768
BstC8I GCNNGC 1 cut(s) 748
BstDEI CTNAG 3 cut(s) 78, 311, 1122
BstF5I GGATG 2 cut(s) 225, 936
BstFNI CGCG 1 cut(s) 1420
BstHHI GCGC 1 cut(s) 1420
BstKTI GATC 5 cut(s) 154, 205, 406, 1189, 1388
BstMAI GTCTC 2 cut(s) 519, 536
BstMBI GATC 5 cut(s) 151, 202, 403, 1186, 1385
BstMWI GCNNNNNNNGC 5 cut(s) 89, 137, 1113, 1376, 1429
BstSCI CCNGG 1 cut(s) 903
BstSFI CTRYAG 2 cut(s) 198, 208
BstUI CGCG 1 cut(s) 1420
BstV1I GCAGC 5 cut(s) 222, 625, 786, 920, 1325
BstV2I GAAGAC 2 cut(s) 1341, 1459
BstX2I RGATCY 1 cut(s) 202
BstYI RGATCY 1 cut(s) 202
BstZ17I GTATAC 2 cut(s) 888, 967
BsuRI GGCC 3 cut(s) 83, 140, 1432
BtgZI GCGATG 1 cut(s) 1421
BtsCI GGATG 2 cut(s) 225, 936
BtsI GCAGTG 2 cut(s) 1026, 1283
BtsIMutI CAGTG 4 cut(s) 760, 1026, 1283, 1423
Cac8I GCNNGC 1 cut(s) 748
CaiI CAGNNNCTG 1 cut(s) 707
CfoI GCGC 1 cut(s) 1420
Cfr13I GGNCC 3 cut(s) 356, 500, 544
CseI GACGC 1 cut(s) 757
Csp6I GTAC 3 cut(s) 231, 990, 1245
CviAII CATG 6 cut(s) 22, 40, 727, 1196, 1271, 1401
CviQI GTAC 3 cut(s) 231, 990, 1245
DdeI CTNAG 3 cut(s) 78, 311, 1122
DpnI GATC 5 cut(s) 153, 204, 405, 1188, 1387
DpnII GATC 5 cut(s) 151, 202, 403, 1186, 1385
EaeI YGGCCR 2 cut(s) 138, 1430
Eam1104I CTCTTC 1 cut(s) 91
EarI CTCTTC 1 cut(s) 91
Ecl136II GAGCTC 1 cut(s) 901
Eco130I CCWWGG 2 cut(s) 739, 940
Eco147I AGGCCT 1 cut(s) 83
Eco24I GRGCYC 1 cut(s) 903
Eco31I GGTCTC 1 cut(s) 536
Eco32I GATATC 1 cut(s) 585
Eco47I GGWCC 3 cut(s) 356, 500, 544
Eco53kI GAGCTC 1 cut(s) 901
Eco57I CTGAAG 3 cut(s) 377, 736, 1453
EcoICRI GAGCTC 1 cut(s) 901
EcoO109I RGGNCCY 1 cut(s) 500
EcoRV GATATC 1 cut(s) 585
EcoT14I CCWWGG 2 cut(s) 739, 940
EcoT38I GRGCYC 1 cut(s) 903
ErhI CCWWGG 2 cut(s) 739, 940
FaeI CATG 6 cut(s) 25, 43, 730, 1199, 1274, 1404
FalI AAGNNNNNCTT 2 cut(s) 1363, 1395
FatI CATG 6 cut(s) 21, 39, 726, 1195, 1270, 1400
FauI CCCGC 3 cut(s) 171, 373, 1100
FblI GTMKAC 3 cut(s) 887, 966, 1201
Fnu4HI GCNGC 9 cut(s) 138, 211, 639, 721, 800, 909, 1100, 1314, 1421
FokI GGATG 2 cut(s) 232, 923
FriOI GRGCYC 1 cut(s) 903
Fsp4HI GCNGC 9 cut(s) 138, 211, 639, 721, 800, 909, 1100, 1314, 1421
FspBI CTAG 3 cut(s) 267, 941, 1211
GlaI GCGC 1 cut(s) 1419
GluI GCNGC 9 cut(s) 138, 211, 639, 721, 800, 909, 1100, 1314, 1421
GsuI CTGGAG 2 cut(s) 235, 1426
HaeIII GGCC 3 cut(s) 83, 140, 1432
HapII CCGG 3 cut(s) 282, 296, 904
HgaI GACGC 1 cut(s) 757
HhaI GCGC 1 cut(s) 1420
Hin1I GRCGYC 1 cut(s) 768
Hin1II CATG 6 cut(s) 25, 43, 730, 1199, 1274, 1404
Hin6I GCGC 1 cut(s) 1418
HinP1I GCGC 1 cut(s) 1418
HincII GTYRAC 2 cut(s) 1202, 1456
HindII GTYRAC 2 cut(s) 1202, 1456
HindIII AAGCTT 4 cut(s) 129, 389, 748, 976
HinfI GANTC 4 cut(s) 440, 698, 704, 1395
HpaII CCGG 3 cut(s) 282, 296, 904
HphI GGTGA 4 cut(s) 397, 440, 1049, 1289
Hpy166II GTNNAC 7 cut(s) 59, 544, 888, 967, 1144, 1202, 1456
Hpy188I TCNGA 5 cut(s) 156, 396, 703, 1053, 1472
Hpy188III TCNNGA 5 cut(s) 236, 662, 708, 1176, 1443
Hpy8I GTNNAC 7 cut(s) 59, 544, 888, 967, 1144, 1202, 1456
HpyAV CCTTC 2 cut(s) 514, 685
HpyCH4III ACNGT 4 cut(s) 647, 989, 1301, 1427
HpyCH4V TGCA 8 cut(s) 48, 92, 210, 322, 746, 842, 1001, 1270
HpyF10VI GCNNNNNNNGC 5 cut(s) 89, 137, 1113, 1376, 1429
HpyF3I CTNAG 3 cut(s) 78, 311, 1122
Hsp92I GRCGYC 1 cut(s) 768
Hsp92II CATG 6 cut(s) 25, 43, 730, 1199, 1274, 1404
HspAI GCGC 1 cut(s) 1418
Kzo9I GATC 5 cut(s) 151, 202, 403, 1186, 1385
LmnI GCTCC 3 cut(s) 898, 906, 1445
Lsp1109I GCAGC 5 cut(s) 222, 625, 786, 920, 1325
LweI GCATC 1 cut(s) 676
MaeI CTAG 3 cut(s) 267, 941, 1211
MaeIII GTNAC 7 cut(s) 191, 223, 314, 428, 786, 1280, 1403
MalI GATC 5 cut(s) 153, 204, 405, 1188, 1387
MbiI CCGCTC 1 cut(s) 567
MboI GATC 5 cut(s) 151, 202, 403, 1186, 1385
MboII GAAGA 8 cut(s) 16, 39, 78, 820, 943, 1085, 1346, 1459
MfeI CAATTG 1 cut(s) 372
MflI RGATCY 1 cut(s) 202
MhlI GDGCHC 1 cut(s) 903
MlsI TGGCCA 1 cut(s) 1432
MluNI TGGCCA 1 cut(s) 1432
MlyI GAGTC 1 cut(s) 698
MmeI TCCRAC 3 cut(s) 435, 589, 1333
MnlI CCTC 8 cut(s) 73, 94, 210, 320, 873, 876, 1183, 1336
Mox20I TGGCCA 1 cut(s) 1432
MroXI GAANNNNTTC 1 cut(s) 1134
MscI TGGCCA 1 cut(s) 1432
MseI TTAA 7 cut(s) 144, 479, 620, 894, 1005, 1181, 1308
MslI CAYNNNNRTG 4 cut(s) 539, 1194, 1302, 1413
Msp20I TGGCCA 1 cut(s) 1432
MspA1I CMGCKG 2 cut(s) 213, 1413
MspI CCGG 3 cut(s) 282, 296, 904
MspR9I CCNGG 1 cut(s) 905
MunI CAATTG 1 cut(s) 372
MvnI CGCG 1 cut(s) 1420
MwoI GCNNNNNNNGC 5 cut(s) 89, 137, 1113, 1376, 1429
NciI CCSGG 1 cut(s) 905
NdeII GATC 5 cut(s) 151, 202, 403, 1186, 1385
NlaIII CATG 6 cut(s) 25, 43, 730, 1199, 1274, 1404
NlaIV GGNNCC 4 cut(s) 357, 502, 571, 712
NmuCI GTSAC 3 cut(s) 428, 1280, 1403
OliI CACNNNNGTG 2 cut(s) 539, 1413
PceI AGGCCT 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 1134
PfeI GAWTC 3 cut(s) 440, 698, 1395
PkrI GCNGC 9 cut(s) 139, 212, 640, 722, 801, 910, 1101, 1315, 1422
PleI GAGTC 1 cut(s) 698
PpsI GAGTC 1 cut(s) 698
PpuMI RGGWCCY 1 cut(s) 500
Psp124BI GAGCTC 1 cut(s) 903
Psp5II RGGWCCY 1 cut(s) 500
PspN4I GGNNCC 4 cut(s) 357, 502, 571, 712
PspPI GGNCC 3 cut(s) 356, 500, 544
PspPPI RGGWCCY 1 cut(s) 500
PstI CTGCAG 1 cut(s) 212
PstNI CAGNNNCTG 1 cut(s) 707
PsuI RGATCY 1 cut(s) 202
PvuII CAGCTG 2 cut(s) 213, 1413
RsaI GTAC 3 cut(s) 232, 991, 1246
RsaNI GTAC 3 cut(s) 231, 990, 1245
RseI CAYNNNNRTG 4 cut(s) 539, 1194, 1302, 1413
SacI GAGCTC 1 cut(s) 903
SalI GTCGAC 1 cut(s) 1200
SaqAI TTAA 7 cut(s) 144, 479, 620, 894, 1005, 1181, 1308
SatI GCNGC 9 cut(s) 138, 211, 639, 721, 800, 909, 1100, 1314, 1421
Sau3AI GATC 5 cut(s) 151, 202, 403, 1186, 1385
Sau96I GGNCC 3 cut(s) 356, 500, 544
SchI GAGTC 1 cut(s) 698
ScrFI CCNGG 1 cut(s) 905
SduI GDGCHC 1 cut(s) 903
SfaNI GCATC 1 cut(s) 676
SfcI CTRYAG 2 cut(s) 198, 208
SinI GGWCC 3 cut(s) 356, 500, 544
SmiMI CAYNNNNRTG 4 cut(s) 539, 1194, 1302, 1413
SseBI AGGCCT 1 cut(s) 83
SspMI CTAG 3 cut(s) 267, 941, 1211
SstI GAGCTC 1 cut(s) 903
StuI AGGCCT 1 cut(s) 83
StyD4I CCNGG 1 cut(s) 903
StyI CCWWGG 2 cut(s) 739, 940
TaaI ACNGT 4 cut(s) 647, 989, 1301, 1427
TaqI TCGA 6 cut(s) 831, 929, 1087, 1177, 1201, 1341
TatI WGTACW 1 cut(s) 230
TauI GCSGC 4 cut(s) 140, 723, 1102, 1423
TfiI GAWTC 3 cut(s) 440, 698, 1395
Tru1I TTAA 7 cut(s) 144, 479, 620, 894, 1005, 1181, 1308
Tru9I TTAA 7 cut(s) 144, 479, 620, 894, 1005, 1181, 1308
TscAI CASTG 4 cut(s) 760, 1033, 1283, 1430
TseFI GTSAC 3 cut(s) 428, 1280, 1403
TseI GCWGC 5 cut(s) 210, 638, 799, 908, 1313
Tsp45I GTSAC 3 cut(s) 428, 1280, 1403
TspDTI ATGAA 4 cut(s) 17, 28, 135, 1347
TspGWI ACGGA 1 cut(s) 1176
TspRI CASTG 4 cut(s) 760, 1033, 1283, 1430
VpaK11BI GGWCC 3 cut(s) 356, 500, 544
XapI RAATTY 1 cut(s) 379
XcmI CCANNNNNNNNNTGG 1 cut(s) 1212
XmaJI CCTAGG 1 cut(s) 940
XmiI GTMKAC 3 cut(s) 887, 966, 1201
XmnI GAANNNNTTC 1 cut(s) 1134
XspI CTAG 3 cut(s) 267, 941, 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.