Rorug04G0337900
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
51159442 .. 51161642
2201 bp
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UTR
Exon/CDS
Intron
Rorug04G0337900.1

Sequence Viewer

Length: 189 bp
ATGGACAGAGCCAATCAGAAATCCAAATCAAATAGCAGTCAAGTTCAGAATGCTGCTCAAGATAACTTTGTTAGACTTGTGACTGCTCGTTTTGTTGAATGTTGCCCGGCCCCTGAACCACTTCTTGAAGAAGCACCTGAACAAGAAGGTCCAAAGAAGCCACGCTCTAAATCTGCTAAGGAATTATGA

Protein Analysis

62

Amino Acids

6.88

Weight (kDa)

7.77

Isoelectric Point (pI)

56.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 98, 128
AoxI GGCC 1 cut(s) 108
ApeKI GCWGC 1 cut(s) 53
Asp700I GAANNNNTTC 1 cut(s) 120
AspS9I GGNCC 2 cut(s) 109, 149
AsuC2I CCSGG 1 cut(s) 107
AvaII GGWCC 1 cut(s) 149
BbvI GCAGC 1 cut(s) 40
BcnI CCSGG 1 cut(s) 107
BisI GCNGC 1 cut(s) 54
BlsI GCNGC 1 cut(s) 55
Bme1390I CCNGG 1 cut(s) 107
Bme18I GGWCC 1 cut(s) 149
BmgT120I GGNCC 2 cut(s) 109, 149
BmiI GGNNCC 1 cut(s) 111
BmrFI CCNGG 1 cut(s) 107
Bpu10I CCTNAGC 1 cut(s) 177
BpuEI CTTGAG 1 cut(s) 42
BpuMI CCSGG 1 cut(s) 107
BseXI GCAGC 1 cut(s) 40
BshFI GGCC 1 cut(s) 110
BsiSI CCGG 1 cut(s) 107
BsmI GAATGC 1 cut(s) 55
BsnI GGCC 1 cut(s) 110
BspANI GGCC 1 cut(s) 110
BspLI GGNNCC 1 cut(s) 111
BstDEI CTNAG 1 cut(s) 177
BstSCI CCNGG 1 cut(s) 105
BstV1I GCAGC 1 cut(s) 40
BsuRI GGCC 1 cut(s) 110
Cfr13I GGNCC 2 cut(s) 109, 149
CviJI RGCY 3 cut(s) 11, 110, 160
CviKI_1 RGCY 3 cut(s) 11, 110, 160
DdeI CTNAG 1 cut(s) 177
Eco47I GGWCC 1 cut(s) 149
FaiI YATR 1 cut(s) 187
Fnu4HI GCNGC 1 cut(s) 54
Fsp4HI GCNGC 1 cut(s) 54
GluI GCNGC 1 cut(s) 54
HaeIII GGCC 1 cut(s) 110
HapII CCGG 1 cut(s) 107
HpaII CCGG 1 cut(s) 107
Hpy188I TCNGA 2 cut(s) 18, 48
Hpy188III TCNNGA 2 cut(s) 59, 125
HpyAV CCTTC 1 cut(s) 140
HpyF3I CTNAG 1 cut(s) 177
LpnPI CCDG 3 cut(s) 120, 126, 150
Lsp1109I GCAGC 1 cut(s) 40
MaeIII GTNAC 1 cut(s) 79
MboII GAAGA 1 cut(s) 140
MluCI AATT 1 cut(s) 182
MroXI GAANNNNTTC 1 cut(s) 120
MspI CCGG 1 cut(s) 107
MspR9I CCNGG 1 cut(s) 107
Mva1269I GAATGC 1 cut(s) 55
NciI CCSGG 1 cut(s) 107
NlaIV GGNNCC 1 cut(s) 111
NmuCI GTSAC 1 cut(s) 79
PctI GAATGC 1 cut(s) 55
PdmI GAANNNNTTC 1 cut(s) 120
PkrI GCNGC 1 cut(s) 55
PspN4I GGNNCC 1 cut(s) 111
PspPI GGNCC 2 cut(s) 109, 149
SatI GCNGC 1 cut(s) 54
Sau96I GGNCC 2 cut(s) 109, 149
ScrFI CCNGG 1 cut(s) 107
SetI ASST 2 cut(s) 139, 151
SinI GGWCC 1 cut(s) 149
SmlI CTYRAG 1 cut(s) 57
SmoI CTYRAG 1 cut(s) 57
Sse9I AATT 1 cut(s) 182
StyD4I CCNGG 1 cut(s) 105
TasI AATT 1 cut(s) 182
TseFI GTSAC 1 cut(s) 79
TseI GCWGC 1 cut(s) 53
Tsp45I GTSAC 1 cut(s) 79
VpaK11BI GGWCC 1 cut(s) 149
XmnI GAANNNNTTC 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.