Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0009054

Physical Location & Seq

Genomic Coordinates Forward (+)

55401706 .. 55407335

Gene Structure 5630 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG403100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGAACAGAGAGAAAAGAGTTTTTATCAATATGGGAACAATCAGTGGTTTCTTGATGTTGTTGTGTAAGGTGGGTTTACTTGTTTTGGTATTGGCAGAGGCTTCTTCTGCAACTCTCTCTCCTACTGGTGTAAATTATGAAGTTGAAGCTTTGGTGGCCATAAAAAGCGATCTAATTGACCCACACAATGTTTTGGAGAACTGGGATAGTAACTCTGTAGATCCTTGTAGCTGGAGGATGGTTACTTGCACACCTGATGGCTATGTATCTGCTCTTGGATTGCCTAGCCAGAGTTTGTCTGGTATCTTATCTCCTGCGATTGGAAACCTCAGTAACTTGCAATCTGTGCTGCTTCAAAATAATGCCATTTCAGGTCCCATTCCCGCTTCAATTGGGAATTTGGAAAAGCTTCAGACACTTGATCTCTCCAATAACATTTTCATTGGTGGCATACCAGATTCTTTGGGCAACCTAAAGAACCTGAACTATTTGCGGTTAAATAACAACAGCCTTACAGGATCATGCCCTGAGACTCTGTCCTCGGTTGAAGGTCTCACTCTTGTGGACCTTTCTTTCAACAATCTCAGTGGCTCCTTGCCAAAAGTATCTGCAAGAACTTTCAAAATTGTTGGTAACCCTTTGATTTGTGGCCTGAAGGCTGCGAACAACTGTTCTGCTGTCTTGCCGGAGCCATTATCTTTCCCACCTGATGCTCTAAACGCTCAATCAGACTCTGGGTCGCAACGCCACCACTTGACTGTAGTCTTTGCTGCAAGCTTTGGTGCTGCCTTTGCTGTTATAATAATAATTGGGTTACTTGTTTGGTTAAGATATAGACACAACCAGCAGATATTCTTCGACGTCAATGATCAATATGACCCTGAAGTATGCTTGGGTCATTTGAAAAGGTATACATTTAAGGAGCTTCGGACAGCAACAGACCATTTTAACTCTAAGAACATTCTTGGAAGAGGTGGCTTTGGGATTGTATTCAAGGGATGTTTGAATGATGGGACTCTGGTGGCGGTTAAGAGGCTGAAGGATTACAACACTGCTGGTGGTGAAATTCAGTTTCAGACAGAAGTTGAGATGATAAGTTTGGCAGTCCATCGGAATCTTCTGAGGCTTTGTGGGTTTTGTTCAACTGAGAATGAAAGACTTCTTGTTTACCCTTACATGCCTAATGGAAGCGTAGCATCTCGACTAAGAGATCATATTCATGGTCGGCCAGCTATAGACTGGGCAAGGAGAAAAAGAATAGCCTTGGGTACGGCCAGGGGGTTGGTTTATTTGCACGAGCAGTGTGACCCCAAAATTATCCACCGTGATGTTAAAGCAGCCAACATTTTGCTAGATGAAGACTTTGAAGCAGTTGTTGGAGATTTTGGGTTAGCAAAGCTTTTGGATCACAGAGAATCACATGTAACCACTGCTGTGCGTGGCACTGTTGGCCATATTGCTCCAGAGTACTTGTCAACTGGTCAATCATCAGAAAAGACGGATGTTTTTGGGTTTGGAATCTTGCTCCTGGAGCTAATAACAGGTCAAAAGGCTTTGGATTTTGGAAGAGTTGCAAACCAGAAGGGTGTAATGCTTGATTGGGTGGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAGAGACAGAGTATGCATGCACACCATTGAACACAAATCCATGTATGTTATTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase

Protein Analysis

574

Amino Acids

62.51

Weight (kDa)

6.41

Isoelectric Point (pI)

35.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	45 - 84	1.2e-14	Leucine rich repeat N-terminal domain
LRR_14	PF23598	106 - 190	1.3e-08	Leucine-rich repeat region
Pkinase	PF00069	317 - 520	7e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	319 - 517	4.7e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60800 AT1G60800
fragaria_vesca	FvH4_4g32990 FvH4_4g32990 FvH4_4g32990
malus_domestica	MD13G1095500.v1.1 MD16G1097000.v1.1
prunus_persica	Prupe.1G249800_v2.0.a1 Prupe.1G249800_v2.0.a1
pyrus_communis	pycom13g08320 pycom16g08260
rosa_chinensis	RchiOBHm_Chr4g0442011
rosa_laevigata	RLG00000006051
rosa_multiflora	Rmu_sc0002501.1_g000019
rosa_roxburghii	Rroxscaffold_5G00382890
rosa_rugosa	Rorug04G0337700 Rorug04G0337800 Rorug04G0337900
rosa_samantha	Rh4AG389700 Rh4BG403100 Rh4DG396300
rosa_wichuraiana	Rw4G033670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	800
AatII	GACGTC	1 cut(s)	864
AccI	GTMKAC	1 cut(s)	911
AciI	CCGC	3 cut(s)	384, 493, 1025
AclWI	GGATC	3 cut(s)	215, 526, 1413
AcoI	YGGCCR	4 cut(s)	156, 1226, 1272, 1450
AcsI	RAATTY	2 cut(s)	397, 1065
AcuI	CTGAAG	4 cut(s)	395, 674, 903, 1058
AcyI	GRCGYC	1 cut(s)	861
AfaI	GTAC	2 cut(s)	1270, 1469
AfiI	CCNNNNNNNGG	1 cut(s)	320
AflIII	ACRYGT	1 cut(s)	1420
AhdI	GACNNNNNGTC	1 cut(s)	736
AjnI	CCWGG	2 cut(s)	1274, 1527
AjuI	GAANNNNNNNTTGG	4 cut(s)	422, 454, 1359, 1391
AleI	CACNNNNGTG	2 cut(s)	560, 1433
AluBI	AGCT	8 cut(s)	149, 231, 409, 777, 925, 1232, 1399, 1534
AluI	AGCT	8 cut(s)	149, 231, 409, 777, 925, 1232, 1399, 1534
Alw26I	GTCTC	4 cut(s)	524, 557, 1613, 1664
AlwI	GGATC	3 cut(s)	215, 526, 1413
AlwNI	CAGNNNCTG	1 cut(s)	734
AoxI	GGCC	5 cut(s)	156, 649, 1226, 1272, 1450
ApeKI	GCWGC	5 cut(s)	349, 659, 770, 785, 1337
ApoI	RAATTY	2 cut(s)	397, 1065
Asp700I	GAANNNNTTC	2 cut(s)	408, 1158
AspS9I	GGNCC	2 cut(s)	374, 565
AsuHPI	GGTGA	1 cut(s)	1073
AvaII	GGWCC	2 cut(s)	374, 565
BalI	TGGCCA	2 cut(s)	158, 1452
BauI	CACGAG	1 cut(s)	1295
BbsI	GAAGAC	1 cut(s)	1365
BbvI	GCAGC	5 cut(s)	336, 646, 757, 772, 1349
BccI	CCATC	4 cut(s)	232, 251, 1004, 1116
BceAI	ACGGC	1 cut(s)	1287
BciT130I	CCWGG	2 cut(s)	1276, 1529
BclI	TGATCA	1 cut(s)	868
BcoDI	GTCTC	4 cut(s)	524, 557, 1613, 1664
BfaI	CTAG	2 cut(s)	285, 1352
BfmI	CTRYAG	3 cut(s)	216, 759, 1233
BisI	GCNGC	5 cut(s)	350, 660, 771, 786, 1338
BlsI	GCNGC	5 cut(s)	351, 661, 772, 787, 1339
BmcAI	AGTACT	1 cut(s)	1469
Bme1390I	CCNGG	2 cut(s)	1276, 1529
Bme18I	GGWCC	2 cut(s)	374, 565
BmeRI	GACNNNNNGTC	1 cut(s)	736
BmgT120I	GGNCC	2 cut(s)	374, 565
BmiI	GGNNCC	3 cut(s)	376, 592, 690
BmrFI	CCNGG	2 cut(s)	1276, 1529
BmrI	ACTGGG	2 cut(s)	211, 1249
BmsI	GCATC	2 cut(s)	700, 1205
BmuI	ACTGGG	2 cut(s)	211, 1249
BoxI	GACNNNNGTC	1 cut(s)	761
BpiI	GAAGAC	1 cut(s)	1365
BpmI	CTGGAG	3 cut(s)	253, 1446, 1550
BsaHI	GRCGYC	1 cut(s)	861
BsaI	GGTCTC	2 cut(s)	557, 1613
BsaJI	CCNNGG	3 cut(s)	540, 1263, 1275
BsaXI	ACNNNNNCTCC	2 cut(s)	103, 133
Bsc4I	CCNNNNNNNGG	1 cut(s)	320
Bse1I	ACTGG	4 cut(s)	130, 206, 1244, 1483
BseBI	CCWGG	2 cut(s)	1276, 1529
BseDI	CCNNGG	3 cut(s)	540, 1263, 1275
BseGI	GGATG	3 cut(s)	243, 1004, 1507
BseLI	CCNNNNNNNGG	1 cut(s)	320
BseMII	CTCAG	5 cut(s)	343, 519, 598, 1112, 1137
BseNI	ACTGG	4 cut(s)	130, 206, 1244, 1483
BseXI	GCAGC	5 cut(s)	336, 646, 757, 772, 1349
BshFI	GGCC	5 cut(s)	158, 651, 1228, 1274, 1452
BsiSI	CCGG	1 cut(s)	686
BslFI	GGGAC	2 cut(s)	360, 1027
BslI	CCNNNNNNNGG	1 cut(s)	320
BsmAI	GTCTC	4 cut(s)	524, 557, 1613, 1664
BsmFI	GGGAC	2 cut(s)	360, 1027
BsnI	GGCC	5 cut(s)	158, 651, 1228, 1274, 1452
Bso31I	GGTCTC	2 cut(s)	557, 1613
Bsp143I	GATC	7 cut(s)	169, 220, 421, 518, 868, 1210, 1405
BspACI	CCGC	3 cut(s)	384, 493, 1025
BspANI	GGCC	5 cut(s)	158, 651, 1228, 1274, 1452
BspCNI	CTCAG	5 cut(s)	342, 520, 597, 1113, 1138
BspLI	GGNNCC	3 cut(s)	376, 592, 690
BspPI	GGATC	3 cut(s)	215, 526, 1413
BspTNI	GGTCTC	2 cut(s)	557, 1613
BsrI	ACTGG	4 cut(s)	130, 206, 1244, 1483
BssECI	CCNNGG	3 cut(s)	540, 1263, 1275
BssMI	GATC	7 cut(s)	169, 220, 421, 518, 868, 1210, 1405
BssNAI	GTATAC	1 cut(s)	912
BssNI	GRCGYC	1 cut(s)	861
BssSI	CACGAG	1 cut(s)	1295
BssT1I	CCWWGG	1 cut(s)	1263
Bst1107I	GTATAC	1 cut(s)	912
Bst2BI	CACGAG	1 cut(s)	1295
Bst2UI	CCWGG	2 cut(s)	1276, 1529
Bst4CI	ACNGT	4 cut(s)	671, 760, 1325, 1447
Bst6I	CTCTTC	2 cut(s)	964, 1561
BstACI	GRCGYC	1 cut(s)	861
BstAPI	GCANNNNNTGC	1 cut(s)	346
BstC8I	GCNNGC	3 cut(s)	775, 1230, 1684
BstDEI	CTNAG	7 cut(s)	329, 528, 584, 954, 1121, 1146, 1205
BstEII	GGTNACC	1 cut(s)	632
BstF5I	GGATG	3 cut(s)	243, 1004, 1507
BstKTI	GATC	7 cut(s)	172, 223, 424, 521, 871, 1213, 1408
BstMAI	GTCTC	4 cut(s)	524, 557, 1613, 1664
BstMBI	GATC	7 cut(s)	169, 220, 421, 518, 868, 1210, 1405
BstMWI	GCNNNNNNNGC	7 cut(s)	107, 155, 346, 719, 791, 1449, 1531
BstNI	CCWGG	2 cut(s)	1276, 1529
BstNSI	RCATGY	3 cut(s)	1180, 1424, 1686
BstPAI	GACNNNNGTC	1 cut(s)	761
BstPI	GGTNACC	1 cut(s)	632
BstSCI	CCNGG	2 cut(s)	1274, 1527
BstSFI	CTRYAG	3 cut(s)	216, 759, 1233
BstV1I	GCAGC	5 cut(s)	336, 646, 757, 772, 1349
BstV2I	GAAGAC	1 cut(s)	1365
BstX2I	RGATCY	1 cut(s)	220
BstXI	CCANNNNNNTGG	1 cut(s)	1282
BstYI	RGATCY	1 cut(s)	220
BstZ17I	GTATAC	1 cut(s)	912
BsuRI	GGCC	5 cut(s)	158, 651, 1228, 1274, 1452
BtsCI	GGATG	3 cut(s)	243, 1004, 1507
BtsI	GCAGTG	3 cut(s)	1050, 1307, 1428
BtsIMutI	CAGTG	6 cut(s)	49, 592, 1050, 1307, 1428, 1443
Cac8I	GCNNGC	3 cut(s)	775, 1230, 1684
CaiI	CAGNNNCTG	1 cut(s)	734
Cfr13I	GGNCC	2 cut(s)	374, 565
Csp6I	GTAC	2 cut(s)	1269, 1468
CspCI	CAANNNNNGTGG	2 cut(s)	568, 603
CviAII	CATG	6 cut(s)	522, 1177, 1220, 1421, 1683, 1707
CviQI	GTAC	2 cut(s)	1269, 1468
DdeI	CTNAG	7 cut(s)	329, 528, 584, 954, 1121, 1146, 1205
DpnI	GATC	7 cut(s)	171, 222, 423, 520, 870, 1212, 1407
DpnII	GATC	7 cut(s)	169, 220, 421, 518, 868, 1210, 1405
DriI	GACNNNNNGTC	1 cut(s)	736
EaeI	YGGCCR	4 cut(s)	156, 1226, 1272, 1450
Eam1104I	CTCTTC	2 cut(s)	964, 1561
Eam1105I	GACNNNNNGTC	1 cut(s)	736
EarI	CTCTTC	2 cut(s)	964, 1561
Eco130I	CCWWGG	1 cut(s)	1263
Eco31I	GGTCTC	2 cut(s)	557, 1613
Eco47I	GGWCC	2 cut(s)	374, 565
Eco57I	CTGAAG	4 cut(s)	395, 674, 903, 1058
Eco91I	GGTNACC	1 cut(s)	632
EcoO109I	RGGNCCY	1 cut(s)	374
EcoO65I	GGTNACC	1 cut(s)	632
EcoRII	CCWGG	2 cut(s)	1274, 1527
EcoT14I	CCWWGG	1 cut(s)	1263
EcoT22I	ATGCAT	1 cut(s)	1684
ErhI	CCWWGG	1 cut(s)	1263
FaeI	CATG	6 cut(s)	525, 1180, 1223, 1424, 1686, 1710
FaqI	GGGAC	2 cut(s)	360, 1027
FatI	CATG	6 cut(s)	521, 1176, 1219, 1420, 1682, 1706
FauI	CCCGC	1 cut(s)	391
FbaI	TGATCA	1 cut(s)	868
FblI	GTMKAC	1 cut(s)	911
Fnu4HI	GCNGC	5 cut(s)	350, 660, 771, 786, 1338
FokI	GGATG	3 cut(s)	250, 1011, 1514
Fsp4HI	GCNGC	5 cut(s)	350, 660, 771, 786, 1338
FspBI	CTAG	2 cut(s)	285, 1352
GluI	GCNGC	5 cut(s)	350, 660, 771, 786, 1338
GsuI	CTGGAG	3 cut(s)	253, 1446, 1550
HaeIII	GGCC	5 cut(s)	158, 651, 1228, 1274, 1452
HapII	CCGG	1 cut(s)	686
Hin1I	GRCGYC	1 cut(s)	861
Hin1II	CATG	6 cut(s)	525, 1180, 1223, 1424, 1686, 1710
HincII	GTYRAC	1 cut(s)	1476
HindII	GTYRAC	1 cut(s)	1476
HindIII	AAGCTT	4 cut(s)	147, 407, 775, 1397
HinfI	GANTC	7 cut(s)	458, 532, 731, 1015, 1114, 1415, 1518
HpaII	CCGG	1 cut(s)	686
HphI	GGTGA	1 cut(s)	1073
Hpy166II	GTNNAC	5 cut(s)	77, 565, 912, 1168, 1476
Hpy188I	TCNGA	7 cut(s)	414, 730, 930, 1077, 1113, 1122, 1492
Hpy188III	TCNNGA	3 cut(s)	52, 1200, 1463
Hpy8I	GTNNAC	5 cut(s)	77, 565, 912, 1168, 1476
Hpy99I	CGWCG	1 cut(s)	863
HpyAV	CCTTC	4 cut(s)	542, 649, 1033, 1576
HpyCH4III	ACNGT	4 cut(s)	671, 760, 1325, 1447
HpyCH4IV	ACGT	1 cut(s)	861
HpyF10VI	GCNNNNNNNGC	7 cut(s)	107, 155, 346, 719, 791, 1449, 1531
HpyF3I	CTNAG	7 cut(s)	329, 528, 584, 954, 1121, 1146, 1205
HpySE526I	ACGT	1 cut(s)	861
Hsp92I	GRCGYC	1 cut(s)	861
Hsp92II	CATG	6 cut(s)	525, 1180, 1223, 1424, 1686, 1710
Ksp22I	TGATCA	1 cut(s)	868
Kzo9I	GATC	7 cut(s)	169, 220, 421, 518, 868, 1210, 1405
LmnI	GCTCC	6 cut(s)	596, 688, 922, 1465, 1530, 1531
Lsp1109I	GCAGC	5 cut(s)	336, 646, 757, 772, 1349
LweI	GCATC	2 cut(s)	700, 1205
MaeI	CTAG	2 cut(s)	285, 1352
MaeII	ACGT	1 cut(s)	861
MaeIII	GTNAC	7 cut(s)	209, 241, 332, 632, 813, 1304, 1423
MalI	GATC	7 cut(s)	171, 222, 423, 520, 870, 1212, 1407
MboI	GATC	7 cut(s)	169, 220, 421, 518, 868, 1210, 1405
MboII	GAAGA	6 cut(s)	96, 847, 981, 1109, 1370, 1578
MfeI	CAATTG	1 cut(s)	390
MflI	RGATCY	1 cut(s)	220
MlsI	TGGCCA	2 cut(s)	158, 1452
MluCI	AATT	8 cut(s)	133, 174, 390, 397, 624, 807, 1065, 1314
MluNI	TGGCCA	2 cut(s)	158, 1452
MlyI	GAGTC	3 cut(s)	526, 725, 1009
MmeI	TCCRAC	1 cut(s)	1357
MnlI	CCTC	7 cut(s)	91, 228, 338, 550, 965, 1026, 1116
Mox20I	TGGCCA	2 cut(s)	158, 1452
Mph1103I	ATGCAT	1 cut(s)	1684
MroXI	GAANNNNTTC	2 cut(s)	408, 1158
MscI	TGGCCA	2 cut(s)	158, 1452
MseI	TTAA	6 cut(s)	497, 827, 918, 948, 1029, 1332
MslI	CAYNNNNRTG	4 cut(s)	560, 1218, 1326, 1433
Msp20I	TGGCCA	2 cut(s)	158, 1452
MspI	CCGG	1 cut(s)	686
MspR9I	CCNGG	2 cut(s)	1276, 1529
MunI	CAATTG	1 cut(s)	390
MvaI	CCWGG	2 cut(s)	1276, 1529
MwoI	GCNNNNNNNGC	7 cut(s)	107, 155, 346, 719, 791, 1449, 1531
NdeII	GATC	7 cut(s)	169, 220, 421, 518, 868, 1210, 1405
NlaIII	CATG	6 cut(s)	525, 1180, 1223, 1424, 1686, 1710
NlaIV	GGNNCC	3 cut(s)	376, 592, 690
NmuCI	GTSAC	1 cut(s)	1304
NsiI	ATGCAT	1 cut(s)	1684
NspI	RCATGY	3 cut(s)	1180, 1424, 1686
OliI	CACNNNNGTG	2 cut(s)	560, 1433
PaeI	GCATGC	1 cut(s)	1686
PciI	ACATGT	1 cut(s)	1420
PdmI	GAANNNNTTC	2 cut(s)	408, 1158
PfeI	GAWTC	4 cut(s)	458, 1114, 1415, 1518
PflFI	GACNNNGTC	1 cut(s)	535
PfoI	TCCNGGA	1 cut(s)	1527
PkrI	GCNGC	5 cut(s)	351, 661, 772, 787, 1339
PleI	GAGTC	3 cut(s)	526, 725, 1009
PpsI	GAGTC	3 cut(s)	526, 725, 1009
PpuMI	RGGWCCY	1 cut(s)	374
PscI	ACATGT	1 cut(s)	1420
PshAI	GACNNNNGTC	1 cut(s)	761
PsiI	TTATAA	1 cut(s)	800
Psp5II	RGGWCCY	1 cut(s)	374
Psp6I	CCWGG	2 cut(s)	1274, 1527
PspEI	GGTNACC	1 cut(s)	632
PspGI	CCWGG	2 cut(s)	1274, 1527
PspN4I	GGNNCC	3 cut(s)	376, 592, 690
PspPI	GGNCC	2 cut(s)	374, 565
PspPPI	RGGWCCY	1 cut(s)	374
PstNI	CAGNNNCTG	1 cut(s)	734
PsuI	RGATCY	1 cut(s)	220
PsyI	GACNNNGTC	1 cut(s)	535
RsaI	GTAC	2 cut(s)	1270, 1469
RsaNI	GTAC	2 cut(s)	1269, 1468
RseI	CAYNNNNRTG	4 cut(s)	560, 1218, 1326, 1433
SaqAI	TTAA	6 cut(s)	497, 827, 918, 948, 1029, 1332
SatI	GCNGC	5 cut(s)	350, 660, 771, 786, 1338
Sau3AI	GATC	7 cut(s)	169, 220, 421, 518, 868, 1210, 1405
Sau96I	GGNCC	2 cut(s)	374, 565
ScaI	AGTACT	1 cut(s)	1469
SchI	GAGTC	3 cut(s)	526, 725, 1009
ScrFI	CCNGG	2 cut(s)	1276, 1529
SfaNI	GCATC	2 cut(s)	700, 1205
SfcI	CTRYAG	3 cut(s)	216, 759, 1233
SinI	GGWCC	2 cut(s)	374, 565
SmiMI	CAYNNNNRTG	4 cut(s)	560, 1218, 1326, 1433
SphI	GCATGC	1 cut(s)	1686
Sse9I	AATT	8 cut(s)	133, 174, 390, 397, 624, 807, 1065, 1314
SsiI	CCGC	3 cut(s)	384, 493, 1025
SspMI	CTAG	2 cut(s)	285, 1352
StyD4I	CCNGG	2 cut(s)	1274, 1527
StyI	CCWWGG	1 cut(s)	1263
TaaI	ACNGT	4 cut(s)	671, 760, 1325, 1447
TaiI	ACGT	1 cut(s)	864
TaqI	TCGA	2 cut(s)	858, 1201
TasI	AATT	8 cut(s)	133, 174, 390, 397, 624, 807, 1065, 1314
TatI	WGTACW	1 cut(s)	1467
TfiI	GAWTC	4 cut(s)	458, 1114, 1415, 1518
Tru1I	TTAA	6 cut(s)	497, 827, 918, 948, 1029, 1332
Tru9I	TTAA	6 cut(s)	497, 827, 918, 948, 1029, 1332
TscAI	CASTG	6 cut(s)	49, 592, 1057, 1307, 1435, 1450
TseFI	GTSAC	1 cut(s)	1304
TseI	GCWGC	5 cut(s)	349, 659, 770, 785, 1337
Tsp45I	GTSAC	1 cut(s)	1304
TspDTI	ATGAA	6 cut(s)	17, 153, 430, 1167, 1208, 1371
TspGWI	ACGGA	1 cut(s)	1514
TspRI	CASTG	6 cut(s)	49, 592, 1057, 1307, 1435, 1450
Tth111I	GACNNNGTC	1 cut(s)	535
VpaK11BI	GGWCC	2 cut(s)	374, 565
XapI	RAATTY	2 cut(s)	397, 1065
XceI	RCATGY	3 cut(s)	1180, 1424, 1686
XcmI	CCANNNNNNNNNTGG	2 cut(s)	296, 1236
XmiI	GTMKAC	1 cut(s)	911
XmnI	GAANNNNTTC	2 cut(s)	408, 1158
XspI	CTAG	2 cut(s)	285, 1352
ZraI	GACGTC	1 cut(s)	862
ZrmI	AGTACT	1 cut(s)	1469
Zsp2I	ATGCAT	1 cut(s)	1684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.