Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0013007

Physical Location & Seq

Genomic Coordinates Reverse (-)

6408710 .. 6412625

Gene Structure 3916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2841 bp

ATGTATGCGGTGAAACAACCCGCCACTGCTGCTCTTAAGTCAACCGCGGCCGTTGACCGCCGGGTGAACGGGTCCGGGAACTACGTCAGGGTCGGGAAGGCCCGGGTGCCCAGTTCCGGGACACGGGTCTATAGGCACGGATCAGTGAGAGCCGTGATCAGCGGCGGAGACAAGGCGTCCGTGGAGGCTGCGACGCCATTACAGAGCAAAGGCGTTAGTGGGTTGTCTTCTTCTTCTTCTTCTTCTGTAGGTGGAGAGATCCAGGTGAAAGCGGTGGTGACGATCAGGAAGAAGATGAAGGAGAAGGTCATAGAGAAGATTGAGGATCAGTGGGAGTTCTTTGTCAATGGGATTGGACAGGGGATTCGGATTCAGCTCATCAGTGAGCAAGTTGATCCTGTTACAAATGCAGGAAAGAGTGTCCAATCCGCCGTGAGAGGGTGGCTGCCAAAGCCGGTTCCTTCGGAGTATGCAAACATTGTTGAATATGCTGCTGACTTCAAAGTCCCATCCGACTTTGGCTGTCCTGGGGCAATTATGATTTCCAATCTGCAGGGCAAAGAGTTCTACTTGTTGGAGATTGTCATTCATGGTTTCGACAGAGGCCCCATTTTCTTCCCTGCAAACACTTGGATCCATTCACGCAAAGATAATCCGGAAAGTAGAATTATCTTCAAAAATCAAGCATGTCTTCCTGCACAAACACCGCCGGGCCTTAAAGATCTTCGACATGAAGACTTACTCAGCATTCGGGGTAATGGGAAAGGCACGCGAAAGGAACATGATAGAATCTATGATTATGAAATTTACAATGAATTGGGAAATCCTGATAAGAGTGAAGATCTGGCTAGGCCCGTCCTTGGTGGCGAGGAGAGGCCTTATCCTAGGCGCTGTAGGACTGGCCGTCCTCCAACGAAGACAGATTCTCTTACCGAAAGTAGAATCGAAAAGCCTCATCCAGTTTATGTGCCTCGGGATGAGACTTTCGAGGAAATTAAGCAGAATGCTTTCTCCACTGGAAGATTGAAGGCTTTGCTTCACAATCTCATACCATCTCTTGCTGTTACATTGTCAAGTACAGACAATCCTTTCGAGTGCTTCTCTGATATAGATGACCTATATGTTGATGGTGTCCTCATGAAATGGAAAGAGGAGGAGAAGAAAGAAGGCAAGAAACTGTTTCTGGGCAGCATGGTGAAAGAGGTTTTTTCCGCAGGAGAAAGGTGGTTGAAATACGAAATCCCCGCTGTTATTAAAATGGATAGATTCTCGTGGTTGCGCGATAATGAATTTGCACGCCAAACTTTAGCTGGGGTCAATCCAGTCAACATTGAGATTTTGAAGGAATTTCCGATTCTCAGCAAGCTAGATCCTGCTGTTTACGGTCCTCCCAAATCTGCTATCACAAAGGAATTGTTAGAGCAAGAAATCAATGGGATGAGTGTAGATAAGGGAAATGCAAACATGCTTTTACGTGAAGGCATATCTAAGAGTAACATTTTATCGTGCCAGGCGATTGAGGAGAAGAGACTGTTTATACTTGATCACCATGACACATATATGCCATTTATTGAGAGGATGAACGCCTTGCCTGGAAGAAAAGCTTACGCCTCTAGGACGGTGTTCTTCTATACCCCTACTGGTATTGTGAGGCCTATAGCTATTGAGCTTTCACTTCCACCAACGGCTTCATCCCCGCAATATAAACGTGTTTATACTCACGGGCATCATGCTACTACACATTGGATTTGGAAGCTAGCCAAAGCTCATGTTTGCTCAAATGATGCTGGCATTCATCAACTAGTCAATCACTGGTTGAGGACTCATGCTTGCGTCGAGCCATATATAATTGCGACTCATAGACAGCTTAGCTCAATGCACCCCATTTTCAAGCTACTCCACCCTCACATGCGCTACACCTTAGAAATCAACGCACTGGCGCGGCAAAGTTTGATAAACGGAGGGGGAATAATTGAGGCTTCTTACAATCCGGGAAAGTACGCCATGGAGATAAGCTCTGCAGCCTACAAGGAGATGTGGAGGTTTGACATGGAAGCATTACCAGCTGATCTTCTTCGAAGAGGCATGGCTGTGGAAGATCCTTCGGCTCCTTGTGGCGTGAAGCTCGTAATTGAGGACTATCCATACGCTGCGGATGGTCTCCTTGTATGGTCTGCTATAAAAGAATGGGTAGAATCCTATGTAGGACACTACTACTCCGAGCCAAATTCTGTAACGTCTGACATTGAGCTCCAACAGTGGTGGAGTGAGATCAAGAATAAGGGTCACCACGACAAACGAAATGAGCCCTGGTGGCCTAAACTCGATACCAAAGAGGACTTATGCGGTATACTTACAACGATTATTTGGGTCGCCTCAGGTCAACACGCAGCCATCAACTTTGGCCAGTACCCTTTTGGTGGCTATGTACCAAACCGTCCTACCATTATGAGAAAACTCATTCCGCAAGAAGACGGCCCTGATTACGAGAAGTTTATTTCTAACCCGCAGCAAACTTTTCTGTCTTCCTTGGCAACTAGACTTCAAGCCACCAAGATAATGGCCGTACAAGATACACTCTCAACTCACTCCCCCGATGAAGAGTACTTGGGTCAGGTGAACCCGCTGGAAACCCATCGGATCAACGATAATGAAGTTATGAAGTTGTTCAATAGATTCTCTGACAGACTCAAGGAGATAGACCAGACAATTAACCTACGAAACAAAGATAGCCATCTTAAAAACAGAAGCGGGGCTGGCATTCCACCATACGAATTGCTGCTTACCACCTCAGGCCCTGGAGTAACTGGCCGCGGAATCCCCAATAGCATTTCTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006082 GO:0006629 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009611 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016020 GO:0016053 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0030258 GO:0032787 GO:0034440 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

947

Amino Acids

106.28

Weight (kDa)

8.4

Isoelectric Point (pI)

47.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipoxygenase	PF00305	238 - 928	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67560
fragaria_vesca	FvH4_4g24180 FvH4_4g24180
malus_domestica	MD13G1114000.v1.1 MD16G1113200.v1.1
prunus_persica	Prupe.1G232400_v2.0.a1
pyrus_communis	pycom13g09920 pycom16g09610
rosa_chinensis	RchiOBHm_Chr4g0430941
rosa_laevigata	RLG00000006936
rosa_multiflora	Rmu_sc0006263.1_g000014
rosa_roxburghii	Rroxscaffold_5G00372630
rosa_rugosa	Rorug04G0247400
rosa_samantha	Rh4AG304000 Rh4BG311300 Rh4CG327600 Rh4DG307400
rosa_wichuraiana	Rw4G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	503
AccB1I	GGYRCC	1 cut(s)	106
AccI	GTMKAC	1 cut(s)	2350
AccII	CGCG	5 cut(s)	47, 772, 1281, 1942, 2814
AccIII	TCCGGA	1 cut(s)	655
AclWI	GGATC	9 cut(s)	148, 253, 333, 389, 628, 641, 1364, 2093, 2648
AcoI	YGGCCR	5 cut(s)	48, 901, 2404, 2562, 2809
AcsI	RAATTY	4 cut(s)	804, 1289, 1346, 2227
AcyI	GRCGYC	2 cut(s)	176, 194
AfaI	GTAC	6 cut(s)	1078, 2000, 2411, 2430, 2568, 2606
AfiI	CCNNNNNNNGG	6 cut(s)	116, 117, 123, 438, 860, 2420
AflII	CTTAAG	1 cut(s)	35
AflIII	ACRYGT	1 cut(s)	1708
AgsI	TTSAA	9 cut(s)	485, 502, 676, 1027, 1231, 1342, 1891, 2546, 2671
AhdI	GACNNNNNGTC	2 cut(s)	175, 903
AhlI	ACTAGT	1 cut(s)	1801
AjnI	CCWGG	6 cut(s)	261, 526, 1509, 1591, 2309, 2797
Alw21I	GWGCWC	1 cut(s)	2253
Alw26I	GTCTC	4 cut(s)	162, 974, 1522, 2165
AlwI	GGATC	9 cut(s)	148, 253, 333, 389, 628, 641, 1364, 2093, 2648
AlwNI	CAGNNNCTG	1 cut(s)	2798
Ama87I	CYCGRG	2 cut(s)	102, 972
Aor13HI	TCCGGA	1 cut(s)	655
ApoI	RAATTY	4 cut(s)	804, 1289, 1346, 2227
ArsI	GACNNNNNNTTYG	4 cut(s)	348, 380, 1073, 1105
Asp700I	GAANNNNTTC	2 cut(s)	1007, 2666
AspA2I	CCTAGG	1 cut(s)	884
AspLEI	GCGC	4 cut(s)	891, 1281, 1914, 1942
AspS9I	GGNCC	8 cut(s)	72, 100, 605, 712, 852, 1385, 2477, 2795
AsuC2I	CCSGG	7 cut(s)	62, 76, 103, 104, 118, 711, 1992
AsuHPI	GGTGA	8 cut(s)	22, 76, 277, 289, 1207, 1538, 2279, 2629
AsuII	TTCGAA	1 cut(s)	2077
AsuNHI	GCTAGC	1 cut(s)	1756
AvaI	CYCGRG	2 cut(s)	102, 972
AvaII	GGWCC	2 cut(s)	72, 1385
AvrII	CCTAGG	1 cut(s)	884
AxyI	CCTNAGG	2 cut(s)	2377, 2791
BaeGI	GKGCMC	1 cut(s)	111
BalI	TGGCCA	1 cut(s)	2406
BamHI	GGATCC	1 cut(s)	633
BanI	GGYRCC	1 cut(s)	106
BanII	GRGCYC	2 cut(s)	2253, 2310
BauI	CACGAG	1 cut(s)	1270
BbsI	GAAGAC	6 cut(s)	219, 683, 741, 923, 2478, 2517
Bbv12I	GWGCWC	1 cut(s)	2253
BccI	CCATC	7 cut(s)	517, 1060, 1121, 2150, 2402, 2643, 2742
BceAI	ACGGC	7 cut(s)	35, 137, 416, 888, 1701, 2491, 2549
BciT130I	CCWGG	6 cut(s)	263, 528, 1511, 1593, 2311, 2799
BclI	TGATCA	2 cut(s)	156, 1543
BcnI	CCSGG	7 cut(s)	62, 76, 103, 104, 118, 711, 1992
BcoDI	GTCTC	4 cut(s)	162, 974, 1522, 2165
BcuI	ACTAGT	1 cut(s)	1801
BfaI	CTAG	7 cut(s)	849, 885, 1367, 1614, 1757, 1802, 2538
BfmI	CTRYAG	6 cut(s)	130, 246, 551, 892, 1656, 2019
BfoI	RGCGCY	1 cut(s)	892
BfrI	CTTAAG	1 cut(s)	35
BglI	GCCNNNNNGGC	1 cut(s)	2314
BglII	AGATCT	2 cut(s)	721, 841
BlnI	CCTAGG	1 cut(s)	884
BlpI	GCTNAGC	1 cut(s)	1868
BmcAI	AGTACT	1 cut(s)	2606
Bme18I	GGWCC	2 cut(s)	72, 1385
BmeRI	GACNNNNNGTC	2 cut(s)	175, 903
BmeT110I	CYCGRG	2 cut(s)	102, 972
BmgT120I	GGNCC	8 cut(s)	72, 100, 605, 712, 852, 1385, 2477, 2795
BmiI	GGNNCC	6 cut(s)	73, 108, 459, 607, 635, 2109
BmrI	ACTGGG	1 cut(s)	105
BmsI	GCATC	2 cut(s)	1735, 1774
BmtI	GCTAGC	1 cut(s)	1760
BmuI	ACTGGG	1 cut(s)	105
BoxI	GACNNNNGTC	1 cut(s)	125
BpiI	GAAGAC	6 cut(s)	219, 683, 741, 923, 2478, 2517
BplI	GAGNNNNNCTC	4 cut(s)	1085, 1117, 2000, 2032
BpmI	CTGGAG	1 cut(s)	2820
Bpu1102I	GCTNAGC	1 cut(s)	1868
Bpu14I	TTCGAA	1 cut(s)	2077
BpuEI	CTTGAG	1 cut(s)	2675
BpuMI	CCSGG	7 cut(s)	62, 76, 103, 104, 118, 711, 1992
BsaAI	YACGTR	1 cut(s)	1475
BsaBI	GATNNNNATC	1 cut(s)	2733
BsaHI	GRCGYC	2 cut(s)	176, 194
BsaI	GGTCTC	1 cut(s)	2165
BsaWI	WCCGGW	1 cut(s)	655
BsaXI	ACNNNNNCTCC	2 cut(s)	2201, 2231
Bsc4I	CCNNNNNNNGG	6 cut(s)	116, 117, 123, 438, 860, 2420
Bse118I	RCCGGY	1 cut(s)	454
Bse21I	CCTNAGG	2 cut(s)	2377, 2791
Bse8I	GATNNNNATC	1 cut(s)	2733
BseAI	TCCGGA	1 cut(s)	655
BseBI	CCWGG	6 cut(s)	263, 528, 1511, 1593, 2311, 2799
BseGI	GGATG	7 cut(s)	509, 955, 982, 1443, 1584, 1691, 2161
BseJI	GATNNNNATC	1 cut(s)	2733
BseLI	CCNNNNNNNGG	6 cut(s)	116, 117, 123, 438, 860, 2420
BseMII	CTCAG	4 cut(s)	757, 1372, 2391, 2805
BseRI	GAGGAG	4 cut(s)	884, 1166, 1169, 1535
BseSI	GKGCMC	1 cut(s)	111
BseX3I	CGGCCG	1 cut(s)	48
BseYI	CCCAGC	1 cut(s)	1310
BsgI	GTGCAG	1 cut(s)	681
Bsh1236I	CGCG	5 cut(s)	47, 772, 1281, 1942, 2814
Bsh1285I	CGRYCG	1 cut(s)	51
BshNI	GGYRCC	1 cut(s)	106
BsiEI	CGRYCG	1 cut(s)	51
BsiHKAI	GWGCWC	1 cut(s)	2253
BsiHKCI	CYCGRG	2 cut(s)	102, 972
BsiSI	CCGG	8 cut(s)	61, 75, 103, 117, 455, 656, 710, 1991
BslFI	GGGAC	2 cut(s)	133, 491
BslI	CCNNNNNNNGG	6 cut(s)	116, 117, 123, 438, 860, 2420
BsmAI	GTCTC	4 cut(s)	162, 974, 1522, 2165
BsmFI	GGGAC	2 cut(s)	133, 491
BsmI	GAATGC	4 cut(s)	747, 1009, 1791, 2760
Bso31I	GGTCTC	1 cut(s)	2165
BsoBI	CYCGRG	2 cut(s)	102, 972
Bsp119I	TTCGAA	1 cut(s)	2077
Bsp1286I	GDGCHC	3 cut(s)	111, 2253, 2310
Bsp13I	TCCGGA	1 cut(s)	655
Bsp1720I	GCTNAGC	1 cut(s)	1868
Bsp19I	CCATGG	1 cut(s)	2004
BspCNI	CTCAG	4 cut(s)	756, 1371, 2390, 2804
BspEI	TCCGGA	1 cut(s)	655
BspFNI	CGCG	5 cut(s)	47, 772, 1281, 1942, 2814
BspHI	TCATGA	1 cut(s)	1137
BspLI	GGNNCC	6 cut(s)	73, 108, 459, 607, 635, 2109
BspMAI	CTGCAG	2 cut(s)	555, 2023
BspOI	GCTAGC	1 cut(s)	1760
BspPI	GGATC	9 cut(s)	148, 253, 333, 389, 628, 641, 1364, 2093, 2648
BspT104I	TTCGAA	1 cut(s)	2077
BspT107I	GGYRCC	1 cut(s)	106
BspTI	CTTAAG	1 cut(s)	35
BspTNI	GGTCTC	1 cut(s)	2165
BsrFI	RCCGGY	1 cut(s)	454
BssAI	RCCGGY	1 cut(s)	454
BssNAI	GTATAC	1 cut(s)	2351
BssNI	GRCGYC	2 cut(s)	176, 194
BssSI	CACGAG	1 cut(s)	1270
BssT1I	CCWWGG	4 cut(s)	859, 884, 2004, 2529
Bst1107I	GTATAC	1 cut(s)	2351
Bst2BI	CACGAG	1 cut(s)	1270
Bst2UI	CCWGG	6 cut(s)	263, 528, 1511, 1593, 2311, 2799
Bst4CI	ACNGT	6 cut(s)	1179, 1385, 1533, 1621, 2259, 2438
Bst6I	CTCTTC	3 cut(s)	1520, 2074, 2595
BstACI	GRCGYC	2 cut(s)	176, 194
BstAFI	CTTAAG	1 cut(s)	35
BstBAI	YACGTR	1 cut(s)	1475
BstBI	TTCGAA	1 cut(s)	2077
BstC8I	GCNNGC	7 cut(s)	770, 1297, 1364, 1758, 1789, 1831, 2758
BstDEI	CTNAG	7 cut(s)	743, 1358, 1488, 1868, 1921, 2377, 2791
BstDSI	CCRYGG	4 cut(s)	45, 180, 2004, 2812
BstEII	GGTNACC	1 cut(s)	2285
BstF5I	GGATG	7 cut(s)	509, 955, 982, 1443, 1584, 1691, 2161
BstFNI	CGCG	5 cut(s)	47, 772, 1281, 1942, 2814
BstH2I	RGCGCY	1 cut(s)	892
BstHHI	GCGC	4 cut(s)	891, 1281, 1914, 1942
BstMAI	GTCTC	4 cut(s)	162, 974, 1522, 2165
BstMCI	CGRYCG	1 cut(s)	51
BstMWI	GCNNNNNNNGC	5 cut(s)	29, 451, 2063, 2314, 2757
BstNI	CCWGG	6 cut(s)	263, 528, 1511, 1593, 2311, 2799
BstNSI	RCATGY	3 cut(s)	690, 1468, 1912
BstPAI	GACNNNNGTC	1 cut(s)	125
BstPI	GGTNACC	1 cut(s)	2285
BstSFI	CTRYAG	6 cut(s)	130, 246, 551, 892, 1656, 2019
BstSLI	GKGCMC	1 cut(s)	111
BstUI	CGCG	5 cut(s)	47, 772, 1281, 1942, 2814
BstV2I	GAAGAC	6 cut(s)	219, 683, 741, 923, 2478, 2517
BstX2I	RGATCY	6 cut(s)	258, 633, 721, 841, 1369, 2098
BstXI	CCANNNNNNTGG	1 cut(s)	2560
BstYI	RGATCY	6 cut(s)	258, 633, 721, 841, 1369, 2098
BstZ17I	GTATAC	1 cut(s)	2351
BstZI	CGGCCG	1 cut(s)	48
Bsu36I	CCTNAGG	2 cut(s)	2377, 2791
BtgI	CCRYGG	4 cut(s)	45, 180, 2004, 2812
BtsCI	GGATG	7 cut(s)	509, 955, 982, 1443, 1584, 1691, 2161
BtsI	GCAGTG	1 cut(s)	24
BtsIMutI	CAGTG	8 cut(s)	24, 150, 335, 388, 1014, 1810, 1934, 2264
Cac8I	GCNNGC	7 cut(s)	770, 1297, 1364, 1758, 1789, 1831, 2758
CaiI	CAGNNNCTG	1 cut(s)	2798
CciI	TCATGA	1 cut(s)	1137
CfoI	GCGC	4 cut(s)	891, 1281, 1914, 1942
Cfr10I	RCCGGY	1 cut(s)	454
Cfr13I	GGNCC	8 cut(s)	72, 100, 605, 712, 852, 1385, 2477, 2795
Cfr42I	CCGCGG	2 cut(s)	48, 2815
Cfr9I	CCCGGG	1 cut(s)	102
CseI	GACGC	3 cut(s)	165, 202, 1822
Csp6I	GTAC	6 cut(s)	1077, 1999, 2410, 2429, 2567, 2605
CspCI	CAANNNNNGTGG	2 cut(s)	2243, 2278
CviQI	GTAC	6 cut(s)	1077, 1999, 2410, 2429, 2567, 2605
DdeI	CTNAG	7 cut(s)	743, 1358, 1488, 1868, 1921, 2377, 2791
DrdI	GACNNNNNNGTC	1 cut(s)	503
DriI	GACNNNNNGTC	2 cut(s)	175, 903
DseDI	GACNNNNNNGTC	1 cut(s)	503
EaeI	YGGCCR	5 cut(s)	48, 901, 2404, 2562, 2809
EagI	CGGCCG	1 cut(s)	48
Eam1104I	CTCTTC	3 cut(s)	1520, 2074, 2595
Eam1105I	GACNNNNNGTC	2 cut(s)	175, 903
EarI	CTCTTC	3 cut(s)	1520, 2074, 2595
EciI	GGCGGA	2 cut(s)	180, 418
Ecl136II	GAGCTC	1 cut(s)	2251
EclXI	CGGCCG	1 cut(s)	48
Eco130I	CCWWGG	4 cut(s)	859, 884, 2004, 2529
Eco147I	AGGCCT	2 cut(s)	877, 1654
Eco24I	GRGCYC	2 cut(s)	2253, 2310
Eco31I	GGTCTC	1 cut(s)	2165
Eco47I	GGWCC	2 cut(s)	72, 1385
Eco52I	CGGCCG	1 cut(s)	48
Eco53kI	GAGCTC	1 cut(s)	2251
Eco81I	CCTNAGG	2 cut(s)	2377, 2791
Eco88I	CYCGRG	2 cut(s)	102, 972
Eco91I	GGTNACC	1 cut(s)	2285
EcoICRI	GAGCTC	1 cut(s)	2251
EcoO109I	RGGNCCY	2 cut(s)	605, 2795
EcoO65I	GGTNACC	1 cut(s)	2285
EcoRII	CCWGG	6 cut(s)	261, 526, 1509, 1591, 2309, 2797
EcoT14I	CCWWGG	4 cut(s)	859, 884, 2004, 2529
EcoT38I	GRGCYC	2 cut(s)	2253, 2310
ErhI	CCWWGG	4 cut(s)	859, 884, 2004, 2529
FalI	AAGNNNNNCTT	4 cut(s)	675, 707, 1588, 1620
FaqI	GGGAC	2 cut(s)	133, 491
FauI	CCCGC	6 cut(s)	28, 1252, 1704, 2514, 2631, 2744
FbaI	TGATCA	2 cut(s)	156, 1543
FblI	GTMKAC	1 cut(s)	2350
FokI	GGATG	7 cut(s)	496, 942, 989, 1450, 1591, 1678, 2168
FriOI	GRGCYC	2 cut(s)	2253, 2310
FspBI	CTAG	7 cut(s)	849, 885, 1367, 1614, 1757, 1802, 2538
GlaI	GCGC	4 cut(s)	890, 1280, 1913, 1941
GsaI	CCCAGC	1 cut(s)	1314
GsuI	CTGGAG	1 cut(s)	2820
HaeII	RGCGCY	1 cut(s)	892
HapII	CCGG	8 cut(s)	61, 75, 103, 117, 455, 656, 710, 1991
HgaI	GACGC	3 cut(s)	165, 202, 1822
HhaI	GCGC	4 cut(s)	891, 1281, 1914, 1942
Hin1I	GRCGYC	2 cut(s)	176, 194
Hin6I	GCGC	4 cut(s)	889, 1279, 1912, 1940
HinP1I	GCGC	4 cut(s)	889, 1279, 1912, 1940
HincII	GTYRAC	4 cut(s)	42, 55, 1327, 2384
HindII	GTYRAC	4 cut(s)	42, 55, 1327, 2384
HindIII	AAGCTT	1 cut(s)	1602
HpaII	CCGG	8 cut(s)	61, 75, 103, 117, 455, 656, 710, 1991
HphI	GGTGA	8 cut(s)	22, 76, 277, 289, 1207, 1538, 2279, 2629
Hpy166II	GTNNAC	8 cut(s)	42, 55, 67, 1327, 1381, 2351, 2384, 2620
Hpy188I	TCNGA	9 cut(s)	369, 466, 514, 1105, 1353, 2221, 2242, 2640, 2683
Hpy188III	TCNNGA	7 cut(s)	94, 286, 656, 827, 974, 1138, 2275
Hpy8I	GTNNAC	8 cut(s)	42, 55, 67, 1327, 1381, 2351, 2384, 2620
Hpy99I	CGWCG	2 cut(s)	196, 1838
HpyAV	CCTTC	9 cut(s)	91, 292, 298, 471, 1021, 1160, 1336, 1472, 2112
HpyCH4III	ACNGT	6 cut(s)	1179, 1385, 1533, 1621, 2259, 2438
HpyCH4IV	ACGT	4 cut(s)	84, 1474, 1708, 2237
HpyCH4V	TGCA	9 cut(s)	410, 473, 553, 623, 698, 1295, 1460, 1879, 2021
HpyF10VI	GCNNNNNNNGC	5 cut(s)	29, 451, 2063, 2314, 2757
HpyF3I	CTNAG	7 cut(s)	743, 1358, 1488, 1868, 1921, 2377, 2791
HpySE526I	ACGT	4 cut(s)	84, 1474, 1708, 2237
Hsp92I	GRCGYC	2 cut(s)	176, 194
HspAI	GCGC	4 cut(s)	889, 1279, 1912, 1940
Kpn2I	TCCGGA	1 cut(s)	655
Ksp22I	TGATCA	2 cut(s)	156, 1543
KspI	CCGCGG	2 cut(s)	48, 2815
LmnI	GCTCC	2 cut(s)	2113, 2256
LweI	GCATC	2 cut(s)	1735, 1774
MaeI	CTAG	7 cut(s)	849, 885, 1367, 1614, 1757, 1802, 2538
MaeII	ACGT	4 cut(s)	84, 1474, 1708, 2237
MaeIII	GTNAC	7 cut(s)	277, 400, 1063, 1493, 2233, 2285, 2803
MflI	RGATCY	6 cut(s)	258, 633, 721, 841, 1369, 2098
MhlI	GDGCHC	3 cut(s)	111, 2253, 2310
MlsI	TGGCCA	1 cut(s)	2406
MluNI	TGGCCA	1 cut(s)	2406
MlyI	GAGTC	3 cut(s)	1816, 1849, 2682
MmeI	TCCRAC	4 cut(s)	537, 555, 935, 2278
Mox20I	TGGCCA	1 cut(s)	2406
MroI	TCCGGA	1 cut(s)	655
MroXI	GAANNNNTTC	2 cut(s)	1007, 2666
MscI	TGGCCA	1 cut(s)	2406
MseI	TTAA	6 cut(s)	36, 717, 996, 1254, 2712, 2739
MslI	CAYNNNNRTG	2 cut(s)	1559, 2090
Msp20I	TGGCCA	1 cut(s)	2406
MspA1I	CMGCKG	6 cut(s)	47, 162, 1247, 2066, 2626, 2814
MspCI	CTTAAG	1 cut(s)	35
MspI	CCGG	8 cut(s)	61, 75, 103, 117, 455, 656, 710, 1991
Mva1269I	GAATGC	4 cut(s)	747, 1009, 1791, 2760
MvaI	CCWGG	6 cut(s)	263, 528, 1511, 1593, 2311, 2799
MvnI	CGCG	5 cut(s)	47, 772, 1281, 1942, 2814
MwoI	GCNNNNNNNGC	5 cut(s)	29, 451, 2063, 2314, 2757
NciI	CCSGG	7 cut(s)	62, 76, 103, 104, 118, 711, 1992
NcoI	CCATGG	1 cut(s)	2004
NheI	GCTAGC	1 cut(s)	1756
NlaIV	GGNNCC	6 cut(s)	73, 108, 459, 607, 635, 2109
NmuCI	GTSAC	2 cut(s)	277, 2285
NspI	RCATGY	3 cut(s)	690, 1468, 1912
NspV	TTCGAA	1 cut(s)	2077
PagI	TCATGA	1 cut(s)	1137
PceI	AGGCCT	2 cut(s)	877, 1654
PcsI	WCGNNNNNNNCGW	1 cut(s)	1511
PctI	GAATGC	4 cut(s)	747, 1009, 1791, 2760
PdmI	GAANNNNTTC	2 cut(s)	1007, 2666
PfoI	TCCNGGA	3 cut(s)	74, 116, 1990
PleI	GAGTC	3 cut(s)	1816, 1849, 2682
PpsI	GAGTC	3 cut(s)	1816, 1849, 2682
Ppu21I	YACGTR	1 cut(s)	1475
PshAI	GACNNNNGTC	1 cut(s)	125
Psp124BI	GAGCTC	1 cut(s)	2253
Psp6I	CCWGG	6 cut(s)	261, 526, 1509, 1591, 2309, 2797
PspEI	GGTNACC	1 cut(s)	2285
PspFI	CCCAGC	1 cut(s)	1310
PspGI	CCWGG	6 cut(s)	261, 526, 1509, 1591, 2309, 2797
PspN4I	GGNNCC	6 cut(s)	73, 108, 459, 607, 635, 2109
PspPI	GGNCC	8 cut(s)	72, 100, 605, 712, 852, 1385, 2477, 2795
PstI	CTGCAG	2 cut(s)	555, 2023
PstNI	CAGNNNCTG	1 cut(s)	2798
PsuI	RGATCY	6 cut(s)	258, 633, 721, 841, 1369, 2098
PvuII	CAGCTG	1 cut(s)	2066
RsaI	GTAC	6 cut(s)	1078, 2000, 2411, 2430, 2568, 2606
RsaNI	GTAC	6 cut(s)	1077, 1999, 2410, 2429, 2567, 2605
RseI	CAYNNNNRTG	2 cut(s)	1559, 2090
SacI	GAGCTC	1 cut(s)	2253
SacII	CCGCGG	2 cut(s)	48, 2815
SaqAI	TTAA	6 cut(s)	36, 717, 996, 1254, 2712, 2739
Sau96I	GGNCC	8 cut(s)	72, 100, 605, 712, 852, 1385, 2477, 2795
ScaI	AGTACT	1 cut(s)	2606
SchI	GAGTC	3 cut(s)	1816, 1849, 2682
SduI	GDGCHC	3 cut(s)	111, 2253, 2310
SfaNI	GCATC	2 cut(s)	1735, 1774
SfcI	CTRYAG	6 cut(s)	130, 246, 551, 892, 1656, 2019
Sfr303I	CCGCGG	2 cut(s)	48, 2815
SfuI	TTCGAA	1 cut(s)	2077
SgrBI	CCGCGG	2 cut(s)	48, 2815
SinI	GGWCC	2 cut(s)	72, 1385
SmaI	CCCGGG	1 cut(s)	104
SmiMI	CAYNNNNRTG	2 cut(s)	1559, 2090
SmlI	CTYRAG	2 cut(s)	35, 2690
SmoI	CTYRAG	2 cut(s)	35, 2690
SpeI	ACTAGT	1 cut(s)	1801
SseBI	AGGCCT	2 cut(s)	877, 1654
SspMI	CTAG	7 cut(s)	849, 885, 1367, 1614, 1757, 1802, 2538
SstI	GAGCTC	1 cut(s)	2253
StuI	AGGCCT	2 cut(s)	877, 1654
StyI	CCWWGG	4 cut(s)	859, 884, 2004, 2529
TaaI	ACNGT	6 cut(s)	1179, 1385, 1533, 1621, 2259, 2438
TaiI	ACGT	4 cut(s)	87, 1477, 1711, 2240
TaqI	TCGA	8 cut(s)	597, 727, 945, 987, 1092, 1836, 2077, 2325
TatI	WGTACW	2 cut(s)	1076, 2604
TauI	GCSGC	4 cut(s)	50, 165, 1945, 2814
Tru1I	TTAA	6 cut(s)	36, 717, 996, 1254, 2712, 2739
Tru9I	TTAA	6 cut(s)	36, 717, 996, 1254, 2712, 2739
TscAI	CASTG	8 cut(s)	31, 150, 335, 388, 1021, 1817, 1941, 2264
TseFI	GTSAC	2 cut(s)	277, 2285
Tsp45I	GTSAC	2 cut(s)	277, 2285
TspGWI	ACGGA	3 cut(s)	153, 169, 1974
TspMI	CCCGGG	1 cut(s)	102
TspRI	CASTG	8 cut(s)	31, 150, 335, 388, 1021, 1817, 1941, 2264
Vha464I	CTTAAG	1 cut(s)	35
VpaK11BI	GGWCC	2 cut(s)	72, 1385
XapI	RAATTY	4 cut(s)	804, 1289, 1346, 2227
XceI	RCATGY	3 cut(s)	690, 1468, 1912
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1307, 2414, 2557
XmaI	CCCGGG	1 cut(s)	102
XmaJI	CCTAGG	1 cut(s)	884
XmiI	GTMKAC	1 cut(s)	2350
XmnI	GAANNNNTTC	2 cut(s)	1007, 2666
XspI	CTAG	7 cut(s)	849, 885, 1367, 1614, 1757, 1802, 2538
ZrmI	AGTACT	1 cut(s)	2606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.