Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0007176

Physical Location & Seq

Genomic Coordinates Forward (+)

8799683 .. 8801757

Gene Structure 2075 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGCGATGGCGAGTTTGGCGCGGCGGAAGGCCTACCTTCTCTCCAGAAACTTGTCCAACATGTCATCGGAGGCCGTCAGGTACTCCTCCCTCACCTCCTTCTCCAGGGGCTTCGCCTCCTCAGGATCTGACGAGAACGACGTCGTCGTCATCGGCGGCGGTCCAGGCGGATACGTGGCGGCAATCAAGGCCGCGCAGCTCGGCCTTAAGACCACCTGCATCGAGAAGCGCGGTGCTCTCGGCGGTACCTGCCTTAACGTCGGATGCATACCCTCCAAGGCGCTTCTTCATTCCTCTCACATGTTCCATGAAGCTAAGCATGCATTTTCGCATCATGGAGTGAAGTTCTCCAATGTCGAGATAGATTTACCTGCCATGATGTCCCAGAAAGACAAAGCTGTTTCCAATCTTACTCGAGGAATTGAAGGGTTGTTCAAGAAGAACAAGGTCACTTATGTTAAAGGTTATGGAAAGTTCATCTCCCCGTCCGAAATTTCAGTGGACGCCATTGATGGTGAGAATACAGTTGTGAAGGGAAAGAATATCATAATTGCCACCGGTTCTGATGTCAAGTCTTTACCCGGAATTACCATTGATGAGAAGAAGATAGTATCATCCACAGGAGCTCTGGCTTTGCAGGAAATCCCAAAGAAACTTGTGGTGGTTGGAGCAGGATATATCGGCCTAGAGATGGGCTCTGTGTGGGGCAGACTTGGTTCTGAGGTAACTGTTGTTGAGTTTGGCCCTGATATTGTCCCAACAATGGACTCGGAAATCCGCAAGCAGTTTCAGCGTTCCCTTGAGAAGCAAGGGATGAAGTTCATGCTCAAAACAAAGGTGGTTGGAGTTGATACCTCTGGAGATGGTGTGAAGTTGACTCTTGAACCAGCATCCGGAGGCGACCAGACATCCTTTGAAGCTGATGTTGTTCTTGTATCTGCTGGTAGGGTTCCATTCACATCCGGGCTTGATTTGGACAAGATAGGAGTTGAAATGGACAAGGGAGGGAGAATTTTAGTGAATGAGAGGTTTTCTACAAATGTCTCGGGTGTTTACGCAATCGGAGATGTTATTCCTGGACCTATGTTGGCCCATAAGGCAGAAGAGGATGGGGTTGCATGCGTGGAGTTCTTAGCCGGTAAGGTTGGCCATGTGGATTATGACAAGGTCCCTGGGGTCGTCTACACTCACCCTGAGGTTGCATCTGTTGGAAAAACTGAGGAACAAGTGAAGGCCTCTGGCGTTGCATACCGAGTTGGAAAGTTCCCTTTCATGGCAAACAGCAGAGCCAAGGCAATAGACAATGCTGAAGGACTCGTCAAGATATTGGCCGAGAAGGAAACAGATAAGATATTGGGAGTTCATATCATGGCATCCAATGCCGGAGAGCTCATTCACGAGGCGGCCATAGCCTTGCAGTATGATGCATCGAGTGAGGACATTGCACGCGTTTGCCATGCACATCCAACCATGAGCGAGGCGTTGAAGGAAGCTGCCATGGCTACATATGACAAGCCCATTCACATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004148 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005746 GO:0005747 GO:0005759 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009507 GO:0009536 GO:0010035 GO:0010038 GO:0016020 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0017076 GO:0019866 GO:0030554 GO:0030964 GO:0031090 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045271 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0050897 GO:0055114 GO:0070013 GO:0070469 GO:0097159 GO:0097367 GO:0098796 GO:0098798 GO:0098800 GO:0098803 GO:1901265 GO:1901363 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00260 ko00280 ko00620 ko00630 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00260 map00280 map00620 map00630 map00640 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

Pyr_redox_2 Pyr_redox_dim

Protein Analysis

510

Amino Acids

53.97

Weight (kDa)

6.72

Isoelectric Point (pI)

33.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	47 - 371	3.5e-77	Pyridine nucleotide-disulphide oxidoreductase
GIDA	PF01134	47 - 192	6e-11	Glucose inhibited division protein A
FAD_oxidored	PF12831	47 - 86	9.6e-11	FAD dependent oxidoreductase
FAD_binding_2	PF00890	47 - 83	6.2e-07	FAD binding domain
NAD_binding_8	PF13450	50 - 87	6.3e-06	NAD(P)-binding Rossmann-like domain
Pyr_redox_3	PF13738	172 - 355	4.7e-09	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	218 - 294	3.3e-23	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim	PF02852	390 - 499	2.4e-41	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48030 AT1G48030 AT1G48030 AT1G48030 AT1G48030 AT3G17240 AT3G17240
fragaria_vesca	FvH4_4g20900
malus_domestica	MD13G1147400.v1.1 MD16G1145800.v1.1
prunus_persica	Prupe.1G110900_v2.0.a1 Prupe.1G110900_v2.0.a1
pyrus_communis	pycom13g12690 pycom16g12500
rosa_chinensis	RchiOBHm_Chr4g0426331
rosa_laevigata	RLG00000007302
rosa_multiflora	Rmu_sc0000730.1_g000046 Rmu_sc0007942.1_g000011
rosa_roxburghii	Rroxscaffold_5G00368340
rosa_rugosa	Rorug04G0210200
rosa_samantha	Rh4AG267200 Rh4BG273100 Rh4CG287300 Rh4DG269800
rosa_wichuraiana	Rw4G023150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	224
AasI	GACNNNNNNGTC	1 cut(s)	146
AatII	GACGTC	1 cut(s)	144
Acc36I	ACCTGC	3 cut(s)	224, 257, 379
Acc65I	GGTACC	1 cut(s)	245
AccB1I	GGYRCC	1 cut(s)	245
AccI	GTMKAC	1 cut(s)	1182
AccII	CGCG	4 cut(s)	22, 194, 231, 1449
AccIII	TCCGGA	1 cut(s)	893
AclWI	GGATC	1 cut(s)	133
AcoI	YGGCCR	3 cut(s)	1147, 1329, 1404
AcsI	RAATTY	2 cut(s)	492, 1011
AcuI	CTGAAG	1 cut(s)	1329
AcyI	GRCGYC	2 cut(s)	141, 504
AfaI	GTAC	2 cut(s)	83, 247
AfiI	CCNNNNNNNGG	5 cut(s)	105, 691, 763, 893, 1273
AflII	CTTAAG	1 cut(s)	206
AflIII	ACRYGT	3 cut(s)	60, 300, 1447
AgeI	ACCGGT	1 cut(s)	557
AgsI	TTSAA	6 cut(s)	425, 436, 884, 917, 992, 1486
AjnI	CCWGG	4 cut(s)	104, 163, 1075, 1171
AluBI	AGCT	7 cut(s)	199, 314, 398, 626, 920, 1390, 1493
AluI	AGCT	7 cut(s)	199, 314, 398, 626, 920, 1390, 1493
Alw21I	GWGCWC	3 cut(s)	238, 628, 1392
Alw26I	GTCTC	1 cut(s)	1048
AlwI	GGATC	1 cut(s)	133
AlwNI	CAGNNNCTG	1 cut(s)	128
Ama87I	CYCGRG	2 cut(s)	414, 1045
Aor13HI	TCCGGA	1 cut(s)	893
ApeKI	GCWGC	2 cut(s)	196, 1493
ApoI	RAATTY	2 cut(s)	492, 1011
AsiGI	ACCGGT	1 cut(s)	557
Asp718I	GGTACC	1 cut(s)	245
AspLEI	GCGC	4 cut(s)	22, 196, 231, 283
AspS9I	GGNCC	5 cut(s)	161, 743, 1079, 1090, 1168
AsuC2I	CCSGG	2 cut(s)	582, 964
AsuHPI	GGTGA	3 cut(s)	85, 527, 1181
AvaI	CYCGRG	2 cut(s)	414, 1045
AvaII	GGWCC	3 cut(s)	161, 1079, 1168
AxyI	CCTNAGG	2 cut(s)	121, 1194
BalI	TGGCCA	1 cut(s)	1149
BanI	GGYRCC	1 cut(s)	245
BanII	GRGCYC	3 cut(s)	628, 698, 1392
BauI	CACGAG	1 cut(s)	1397
Bbv12I	GWGCWC	3 cut(s)	238, 628, 1392
BbvI	GCAGC	2 cut(s)	208, 1480
BccI	CCATC	4 cut(s)	506, 685, 857, 1103
BceAI	ACGGC	1 cut(s)	59
BciT130I	CCWGG	4 cut(s)	106, 165, 1077, 1173
BciVI	GTATCC	1 cut(s)	164
BcnI	CCSGG	2 cut(s)	582, 964
BcoDI	GTCTC	1 cut(s)	1048
BfaI	CTAG	2 cut(s)	686, 1528
BfoI	RGCGCY	1 cut(s)	284
BfrI	CTTAAG	1 cut(s)	206
BfuAI	ACCTGC	3 cut(s)	224, 257, 379
BfuI	GTATCC	1 cut(s)	164
BglI	GCCNNNNNGGC	1 cut(s)	1097
BisI	GCNGC	7 cut(s)	23, 157, 180, 192, 197, 1404, 1494
BlpI	GCTNAGC	1 cut(s)	315
BlsI	GCNGC	7 cut(s)	24, 158, 181, 193, 198, 1405, 1495
Bme1390I	CCNGG	6 cut(s)	106, 165, 582, 964, 1077, 1173
Bme18I	GGWCC	3 cut(s)	161, 1079, 1168
BmeT110I	CYCGRG	2 cut(s)	414, 1045
BmgT120I	GGNCC	5 cut(s)	161, 743, 1079, 1090, 1168
BmiI	GGNNCC	3 cut(s)	247, 951, 1170
BmrFI	CCNGG	6 cut(s)	106, 165, 582, 964, 1077, 1173
BmsI	GCATC	8 cut(s)	228, 254, 340, 899, 1211, 1382, 1414, 1436
BplI	GAGNNNNNCTC	2 cut(s)	680, 712
BpmI	CTGGAG	3 cut(s)	28, 88, 879
Bpu1102I	GCTNAGC	1 cut(s)	315
BpuEI	CTTGAG	1 cut(s)	821
BpuMI	CCSGG	2 cut(s)	582, 964
BsaAI	YACGTR	1 cut(s)	175
BsaHI	GRCGYC	2 cut(s)	141, 504
BsaJI	CCNNGG	6 cut(s)	105, 276, 1171, 1172, 1290, 1497
BsaWI	WCCGGW	2 cut(s)	557, 893
BsaXI	ACNNNNNCTCC	4 cut(s)	26, 56, 852, 882
Bsc4I	CCNNNNNNNGG	5 cut(s)	105, 691, 763, 893, 1273
Bse118I	RCCGGY	2 cut(s)	557, 1136
Bse21I	CCTNAGG	2 cut(s)	121, 1194
Bse3DI	GCAATG	1 cut(s)	1440
BseAI	TCCGGA	1 cut(s)	893
BseBI	CCWGG	4 cut(s)	106, 165, 1077, 1173
BseDI	CCNNGG	6 cut(s)	105, 276, 1171, 1172, 1290, 1497
BseGI	GGATG	9 cut(s)	269, 614, 819, 890, 908, 959, 1114, 1373, 1462
BseLI	CCNNNNNNNGG	5 cut(s)	105, 691, 763, 893, 1273
BseMI	GCAATG	1 cut(s)	1440
BseMII	CTCAG	4 cut(s)	135, 711, 1185, 1209
BseRI	GAGGAG	2 cut(s)	76, 109
BseXI	GCAGC	2 cut(s)	208, 1480
Bsh1236I	CGCG	4 cut(s)	22, 194, 231, 1449
BshNI	GGYRCC	1 cut(s)	245
BshTI	ACCGGT	1 cut(s)	557
BsiHKAI	GWGCWC	3 cut(s)	238, 628, 1392
BsiHKCI	CYCGRG	2 cut(s)	414, 1045
BsiSI	CCGG	6 cut(s)	558, 582, 894, 963, 1137, 1383
BslFI	GGGAC	3 cut(s)	367, 740, 1154
BslI	CCNNNNNNNGG	5 cut(s)	105, 691, 763, 893, 1273
BsmAI	GTCTC	1 cut(s)	1048
BsmFI	GGGAC	3 cut(s)	367, 740, 1154
BsoBI	CYCGRG	2 cut(s)	414, 1045
Bsp1286I	GDGCHC	4 cut(s)	238, 628, 698, 1392
Bsp13I	TCCGGA	1 cut(s)	893
Bsp143I	GATC	1 cut(s)	125
Bsp1720I	GCTNAGC	1 cut(s)	315
Bsp19I	CCATGG	1 cut(s)	1497
BspCNI	CTCAG	4 cut(s)	134, 712, 1186, 1210
BspEI	TCCGGA	1 cut(s)	893
BspFNI	CGCG	4 cut(s)	22, 194, 231, 1449
BspLI	GGNNCC	3 cut(s)	247, 951, 1170
BspMI	ACCTGC	3 cut(s)	224, 257, 379
BspPI	GGATC	1 cut(s)	133
BspT107I	GGYRCC	1 cut(s)	245
BspTI	CTTAAG	1 cut(s)	206
BsrDI	GCAATG	1 cut(s)	1440
BsrFI	RCCGGY	2 cut(s)	557, 1136
BssAI	RCCGGY	2 cut(s)	557, 1136
BssECI	CCNNGG	6 cut(s)	105, 276, 1171, 1172, 1290, 1497
BssMI	GATC	1 cut(s)	125
BssNI	GRCGYC	2 cut(s)	141, 504
BssSI	CACGAG	1 cut(s)	1397
BssT1I	CCWWGG	3 cut(s)	276, 1290, 1497
Bst2BI	CACGAG	1 cut(s)	1397
Bst2UI	CCWGG	4 cut(s)	106, 165, 1077, 1173
Bst4CI	ACNGT	2 cut(s)	526, 730
Bst6I	CTCTTC	1 cut(s)	1098
BstACI	GRCGYC	2 cut(s)	141, 504
BstAFI	CTTAAG	1 cut(s)	206
BstAPI	GCANNNNNTGC	1 cut(s)	1379
BstBAI	YACGTR	1 cut(s)	175
BstC8I	GCNNGC	4 cut(s)	321, 782, 1120, 1447
BstDEI	CTNAG	6 cut(s)	121, 315, 720, 1132, 1194, 1218
BstDSI	CCRYGG	1 cut(s)	1497
BstENI	CCTNNNNNAGG	1 cut(s)	103
BstF5I	GGATG	9 cut(s)	269, 614, 819, 890, 908, 959, 1114, 1373, 1462
BstFNI	CGCG	4 cut(s)	22, 194, 231, 1449
BstH2I	RGCGCY	1 cut(s)	284
BstHHI	GCGC	4 cut(s)	22, 196, 231, 283
BstKTI	GATC	1 cut(s)	128
BstMAI	GTCTC	1 cut(s)	1048
BstMBI	GATC	1 cut(s)	125
BstNI	CCWGG	4 cut(s)	106, 165, 1077, 1173
BstNSI	RCATGY	4 cut(s)	64, 304, 323, 1122
BstSCI	CCNGG	6 cut(s)	104, 163, 580, 962, 1075, 1171
BstUI	CGCG	4 cut(s)	22, 194, 231, 1449
BstV1I	GCAGC	2 cut(s)	208, 1480
BstX2I	RGATCY	1 cut(s)	125
BstYI	RGATCY	1 cut(s)	125
Bsu36I	CCTNAGG	2 cut(s)	121, 1194
BsuI	GTATCC	1 cut(s)	164
BtgI	CCRYGG	1 cut(s)	1497
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	9 cut(s)	269, 614, 819, 890, 908, 959, 1114, 1373, 1462
BtsIMutI	CAGTG	1 cut(s)	504
BveI	ACCTGC	3 cut(s)	224, 257, 379
Cac8I	GCNNGC	4 cut(s)	321, 782, 1120, 1447
CaiI	CAGNNNCTG	1 cut(s)	128
CfoI	GCGC	4 cut(s)	22, 196, 231, 283
Cfr10I	RCCGGY	2 cut(s)	557, 1136
Cfr13I	GGNCC	5 cut(s)	161, 743, 1079, 1090, 1168
CseI	GACGC	1 cut(s)	512
Csp6I	GTAC	2 cut(s)	82, 246
CspAI	ACCGGT	1 cut(s)	557
CviQI	GTAC	2 cut(s)	82, 246
DdeI	CTNAG	6 cut(s)	121, 315, 720, 1132, 1194, 1218
DpnI	GATC	1 cut(s)	127
DpnII	GATC	1 cut(s)	125
DrdI	GACNNNNNNGTC	1 cut(s)	146
DseDI	GACNNNNNNGTC	1 cut(s)	146
EaeI	YGGCCR	3 cut(s)	1147, 1329, 1404
Eam1104I	CTCTTC	1 cut(s)	1098
EarI	CTCTTC	1 cut(s)	1098
EciI	GGCGGA	2 cut(s)	40, 183
Ecl136II	GAGCTC	2 cut(s)	626, 1390
Eco130I	CCWWGG	3 cut(s)	276, 1290, 1497
Eco147I	AGGCCT	2 cut(s)	32, 1235
Eco24I	GRGCYC	3 cut(s)	628, 698, 1392
Eco47I	GGWCC	3 cut(s)	161, 1079, 1168
Eco53kI	GAGCTC	2 cut(s)	626, 1390
Eco57I	CTGAAG	1 cut(s)	1329
Eco81I	CCTNAGG	2 cut(s)	121, 1194
Eco88I	CYCGRG	2 cut(s)	414, 1045
EcoICRI	GAGCTC	2 cut(s)	626, 1390
EcoNI	CCTNNNNNAGG	1 cut(s)	103
EcoO109I	RGGNCCY	1 cut(s)	1168
EcoRII	CCWGG	4 cut(s)	104, 163, 1075, 1171
EcoT14I	CCWWGG	3 cut(s)	276, 1290, 1497
EcoT22I	ATGCAT	3 cut(s)	269, 325, 1429
EcoT38I	GRGCYC	3 cut(s)	628, 698, 1392
ErhI	CCWWGG	3 cut(s)	276, 1290, 1497
FaqI	GGGAC	3 cut(s)	367, 740, 1154
FauNDI	CATATG	1 cut(s)	1507
FblI	GTMKAC	1 cut(s)	1182
Fnu4HI	GCNGC	7 cut(s)	23, 157, 180, 192, 197, 1404, 1494
FokI	GGATG	9 cut(s)	276, 601, 826, 877, 895, 946, 1121, 1360, 1449
FriOI	GRGCYC	3 cut(s)	628, 698, 1392
Fsp4HI	GCNGC	7 cut(s)	23, 157, 180, 192, 197, 1404, 1494
FspBI	CTAG	2 cut(s)	686, 1528
GlaI	GCGC	4 cut(s)	21, 195, 230, 282
GluI	GCNGC	7 cut(s)	23, 157, 180, 192, 197, 1404, 1494
GsuI	CTGGAG	3 cut(s)	28, 88, 879
HaeII	RGCGCY	1 cut(s)	284
HapII	CCGG	6 cut(s)	558, 582, 894, 963, 1137, 1383
HgaI	GACGC	1 cut(s)	512
HhaI	GCGC	4 cut(s)	22, 196, 231, 283
Hin1I	GRCGYC	2 cut(s)	141, 504
Hin6I	GCGC	4 cut(s)	20, 194, 229, 281
HinP1I	GCGC	4 cut(s)	20, 194, 229, 281
HincII	GTYRAC	1 cut(s)	876
HindII	GTYRAC	1 cut(s)	876
HinfI	GANTC	3 cut(s)	767, 877, 1314
HpaII	CCGG	6 cut(s)	558, 582, 894, 963, 1137, 1383
HphI	GGTGA	3 cut(s)	85, 527, 1181
Hpy166II	GTNNAC	4 cut(s)	502, 876, 1054, 1183
Hpy188I	TCNGA	8 cut(s)	70, 130, 263, 490, 565, 721, 772, 1064
Hpy8I	GTNNAC	4 cut(s)	502, 876, 1054, 1183
Hpy99I	CGWCG	4 cut(s)	143, 146, 149, 263
HpyAV	CCTTC	9 cut(s)	22, 47, 109, 419, 526, 1225, 1304, 1330, 1480
HpyCH4III	ACNGT	2 cut(s)	526, 730
HpyCH4IV	ACGT	3 cut(s)	141, 174, 258
HpyF3I	CTNAG	6 cut(s)	121, 315, 720, 1132, 1194, 1218
HpySE526I	ACGT	3 cut(s)	141, 174, 258
Hsp92I	GRCGYC	2 cut(s)	141, 504
HspAI	GCGC	4 cut(s)	20, 194, 229, 281
Kpn2I	TCCGGA	1 cut(s)	893
KpnI	GGTACC	1 cut(s)	249
Kzo9I	GATC	1 cut(s)	125
LmnI	GCTCC	2 cut(s)	623, 668
Lsp1109I	GCAGC	2 cut(s)	208, 1480
LweI	GCATC	8 cut(s)	228, 254, 340, 899, 1211, 1382, 1414, 1436
MaeI	CTAG	2 cut(s)	686, 1528
MaeII	ACGT	3 cut(s)	141, 174, 258
MaeIII	GTNAC	2 cut(s)	448, 724
MalI	GATC	1 cut(s)	127
MboI	GATC	1 cut(s)	125
MboII	GAAGA	5 cut(s)	278, 451, 613, 616, 1115
MflI	RGATCY	1 cut(s)	125
MhlI	GDGCHC	4 cut(s)	238, 628, 698, 1392
MlsI	TGGCCA	1 cut(s)	1149
MluCI	AATT	5 cut(s)	420, 492, 549, 585, 1011
MluI	ACGCGT	1 cut(s)	1447
MluNI	TGGCCA	1 cut(s)	1149
MlyI	GAGTC	3 cut(s)	761, 871, 1308
MmeI	TCCRAC	7 cut(s)	81, 241, 646, 823, 1189, 1237, 1490
Mox20I	TGGCCA	1 cut(s)	1149
Mph1103I	ATGCAT	3 cut(s)	269, 325, 1429
MroI	TCCGGA	1 cut(s)	893
MscI	TGGCCA	1 cut(s)	1149
MseI	TTAA	3 cut(s)	207, 255, 459
Msp20I	TGGCCA	1 cut(s)	1149
MspCI	CTTAAG	1 cut(s)	206
MspI	CCGG	6 cut(s)	558, 582, 894, 963, 1137, 1383
MspR9I	CCNGG	6 cut(s)	106, 165, 582, 964, 1077, 1173
MvaI	CCWGG	4 cut(s)	106, 165, 1077, 1173
MvnI	CGCG	4 cut(s)	22, 194, 231, 1449
NciI	CCSGG	2 cut(s)	582, 964
NcoI	CCATGG	1 cut(s)	1497
NdeI	CATATG	1 cut(s)	1507
NdeII	GATC	1 cut(s)	125
NlaIV	GGNNCC	3 cut(s)	247, 951, 1170
NmeAIII	GCCGAG	3 cut(s)	180, 219, 1357
NmuCI	GTSAC	1 cut(s)	448
NsiI	ATGCAT	3 cut(s)	269, 325, 1429
NspI	RCATGY	4 cut(s)	64, 304, 323, 1122
PaeI	GCATGC	2 cut(s)	323, 1122
PaeR7I	CTCGAG	1 cut(s)	414
PaqCI	CACCTGC	1 cut(s)	224
PasI	CCCWGGG	1 cut(s)	1172
PceI	AGGCCT	2 cut(s)	32, 1235
PciI	ACATGT	2 cut(s)	60, 300
PcsI	WCGNNNNNNNCGW	2 cut(s)	138, 144
PflFI	GACNNNGTC	2 cut(s)	143, 1166
PfoI	TCCNGGA	1 cut(s)	1075
PinAI	ACCGGT	1 cut(s)	557
PkrI	GCNGC	7 cut(s)	24, 158, 181, 193, 198, 1405, 1495
PleI	GAGTC	3 cut(s)	761, 871, 1308
PpsI	GAGTC	3 cut(s)	761, 871, 1308
Ppu21I	YACGTR	1 cut(s)	175
PpuMI	RGGWCCY	1 cut(s)	1168
PscI	ACATGT	2 cut(s)	60, 300
Psp124BI	GAGCTC	2 cut(s)	628, 1392
Psp5II	RGGWCCY	1 cut(s)	1168
Psp6I	CCWGG	4 cut(s)	104, 163, 1075, 1171
PspGI	CCWGG	4 cut(s)	104, 163, 1075, 1171
PspN4I	GGNNCC	3 cut(s)	247, 951, 1170
PspPI	GGNCC	5 cut(s)	161, 743, 1079, 1090, 1168
PspPPI	RGGWCCY	1 cut(s)	1168
PspXI	VCTCGAGB	1 cut(s)	414
PstNI	CAGNNNCTG	1 cut(s)	128
PsuI	RGATCY	1 cut(s)	125
PsyI	GACNNNGTC	2 cut(s)	143, 1166
RsaI	GTAC	2 cut(s)	83, 247
RsaNI	GTAC	2 cut(s)	82, 246
SacI	GAGCTC	2 cut(s)	628, 1392
SaqAI	TTAA	3 cut(s)	207, 255, 459
SatI	GCNGC	7 cut(s)	23, 157, 180, 192, 197, 1404, 1494
Sau3AI	GATC	1 cut(s)	125
Sau96I	GGNCC	5 cut(s)	161, 743, 1079, 1090, 1168
SchI	GAGTC	3 cut(s)	761, 871, 1308
ScrFI	CCNGG	6 cut(s)	106, 165, 582, 964, 1077, 1173
SduI	GDGCHC	4 cut(s)	238, 628, 698, 1392
SfaNI	GCATC	8 cut(s)	228, 254, 340, 899, 1211, 1382, 1414, 1436
Sfr274I	CTCGAG	1 cut(s)	414
SinI	GGWCC	3 cut(s)	161, 1079, 1168
SlaI	CTCGAG	1 cut(s)	414
SmlI	CTYRAG	3 cut(s)	206, 414, 800
SmoI	CTYRAG	3 cut(s)	206, 414, 800
SphI	GCATGC	2 cut(s)	323, 1122
Sse9I	AATT	5 cut(s)	420, 492, 549, 585, 1011
SseBI	AGGCCT	2 cut(s)	32, 1235
SspMI	CTAG	2 cut(s)	686, 1528
SstI	GAGCTC	2 cut(s)	628, 1392
StuI	AGGCCT	2 cut(s)	32, 1235
StyD4I	CCNGG	6 cut(s)	104, 163, 580, 962, 1075, 1171
StyI	CCWWGG	3 cut(s)	276, 1290, 1497
TaaI	ACNGT	2 cut(s)	526, 730
TaiI	ACGT	3 cut(s)	144, 177, 261
TaqI	TCGA	4 cut(s)	222, 357, 415, 1430
TasI	AATT	5 cut(s)	420, 492, 549, 585, 1011
TauI	GCSGC	5 cut(s)	25, 159, 182, 194, 1406
Tru1I	TTAA	3 cut(s)	207, 255, 459
Tru9I	TTAA	3 cut(s)	207, 255, 459
TscAI	CASTG	1 cut(s)	504
TseFI	GTSAC	1 cut(s)	448
TseI	GCWGC	2 cut(s)	196, 1493
Tsp45I	GTSAC	1 cut(s)	448
TspDTI	ATGAA	7 cut(s)	278, 324, 466, 811, 830, 1261, 1352
TspRI	CASTG	1 cut(s)	504
Tth111I	GACNNNGTC	2 cut(s)	143, 1166
Vha464I	CTTAAG	1 cut(s)	206
VpaK11BI	GGWCC	3 cut(s)	161, 1079, 1168
XagI	CCTNNNNNAGG	1 cut(s)	103
XapI	RAATTY	2 cut(s)	492, 1011
XceI	RCATGY	4 cut(s)	64, 304, 323, 1122
XcmI	CCANNNNNNNNNTGG	1 cut(s)	625
XhoI	CTCGAG	1 cut(s)	414
XmiI	GTMKAC	1 cut(s)	1182
XspI	CTAG	2 cut(s)	686, 1528
ZraI	GACGTC	1 cut(s)	142
Zsp2I	ATGCAT	3 cut(s)	269, 325, 1429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.