Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007942.1

Orthogroup ID

OG0007176

Physical Location & Seq

Genomic Coordinates Forward (+)

34996 .. 36932

Gene Structure 1937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007942.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

atggcaagctttgctcggcggaaggcctaccttctatctagaaacttgtccaacacgtcgtcggaggccgtccgctactccttctccatcacctccttctcccgcggcttcgcttcctcgggatctgacgacaacgacgtcgtcgtcatcggcggcggacccggcggctacgtcgccgccatcaaggccgcccagctcggcctcaagaccacctgcatcgagaagcgcggtgctctcggcggcacctgcctcaacgtcggctgcataccctccaaggcgcttcttcattcgtctcacatgtaccatgaagctctgcattcatttaaaagtcatggtgttaagttcgacaatgttcagatcgatttgcctgccatgatgtcccagaaagacaaagccgtgtctaatctgactaaaggaatcgaaggtctgttcaagaagaataaggtgacttatgttaaaggctatggaaagttcgtctcccccaatgaagtttcagtggaaaccattgatggcgggaatacggttgtgaaaggaaaaaatattatcattgccacaggttctgatgtcaaatctttgcctggggttaccattgatgagaagaaaatagtatcatcaactggtgctctggctctgtcagaaatcccaaagaaacttgtggttgttggagcaggatatattggccttgagatgggctcagtctggggaagacttggttctgagataactgttgttgagtttggacctgatattgtcccatcaatggattcggaaatccgcaagcaattccagcgttcccttgagaagcaagggatgaaatttgtactcaaaacaaaggtggtaggagttgatacttctggagatggtgtgaagttgacccttgaaccagcagctggtggtgagcagaccacactggaagctgatgttgttcttgtatccgctggtaggaatccattcacatctgggctcgatttggacaagataggagttgaaactgacaagatggggagaattttagtgaatgaaaggtttgtaacaaatgttccaagtgttcatgcaattggtgatgttattcctggacctatgctcgctcacaaggcagaagaggatggggttgcatgtgtggagttcatagctggtaaggttggccatgtggactatgacaaggttcctggggttgtctatactcaccctgaggttgcgtctgttggaaagactgaggagcaagtgaaggccctaggcgtcgaataccgagttggaaagttcccattcttggcaaacagcagagccaaggcaatagatgatgctgaaggactagtcaagattttggctgagaaagaaacagataagatcttgggagttcacatcatggcacccaatgcaggagagctcattcacgaggcagccatagcattgcagtatgatgcatcaagtgaggacattgctcgcgtttgccatgcacatccaaccatgagcgaggccttgaaggaagctgccatggcgacttatgacaaggccattcacatctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004148 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005746 GO:0005747 GO:0005759 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009507 GO:0009536 GO:0010035 GO:0010038 GO:0016020 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0017076 GO:0019866 GO:0030554 GO:0030964 GO:0031090 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045271 GO:0046686 GO:0046872 GO:0046914 GO:0048046 GO:0050896 GO:0050897 GO:0055114 GO:0070013 GO:0070469 GO:0097159 GO:0097367 GO:0098796 GO:0098798 GO:0098800 GO:0098803 GO:1901265 GO:1901363 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00260 ko00280 ko00620 ko00630 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00260 map00280 map00620 map00630 map00640 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

Pyr_redox_2 Pyr_redox_dim

Protein Analysis

508

Amino Acids

53.91

Weight (kDa)

6.55

Isoelectric Point (pI)

32.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48030 AT1G48030 AT1G48030 AT1G48030 AT1G48030 AT3G17240 AT3G17240
fragaria_vesca	FvH4_4g20900
malus_domestica	MD13G1147400.v1.1 MD16G1145800.v1.1
prunus_persica	Prupe.1G110900_v2.0.a1 Prupe.1G110900_v2.0.a1
pyrus_communis	pycom13g12690 pycom16g12500
rosa_chinensis	RchiOBHm_Chr4g0426331
rosa_laevigata	RLG00000007302
rosa_multiflora	Rmu_sc0000730.1_g000046 Rmu_sc0007942.1_g000011
rosa_roxburghii	Rroxscaffold_5G00368340
rosa_rugosa	Rorug04G0210200
rosa_samantha	Rh4AG267200 Rh4BG273100 Rh4CG287300 Rh4DG269800
rosa_wichuraiana	Rw4G023150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	221, 254
AasI	GACNNNNNNGTC	2 cut(s)	137, 143
AatII	GACGTC	1 cut(s)	141
Acc36I	ACCTGC	2 cut(s)	221, 254
AccB1I	GGYRCC	2 cut(s)	242, 1369
AccB7I	CCANNNNNTGG	1 cut(s)	890
AccII	CGCG	3 cut(s)	105, 228, 1446
AclWI	GGATC	1 cut(s)	130
AcoI	YGGCCR	1 cut(s)	1144
AcsI	RAATTY	2 cut(s)	815, 1008
AcuI	CTGAAG	1 cut(s)	1326
AcyI	GRCGYC	2 cut(s)	138, 1239
AfaI	GTAC	2 cut(s)	302, 822
AfiI	CCNNNNNNNGG	6 cut(s)	688, 760, 890, 942, 1270, 1379
AflIII	ACRYGT	2 cut(s)	54, 297
AgsI	TTSAA	4 cut(s)	433, 881, 989, 1483
AhlI	ACTAGT	1 cut(s)	1312
AjiI	CACGTC	1 cut(s)	57
AjnI	CCWGG	3 cut(s)	577, 1072, 1168
AjuI	GAANNNNNNNTTGG	2 cut(s)	1236, 1268
AluBI	AGCT	8 cut(s)	9, 196, 311, 890, 917, 1133, 1387, 1490
AluI	AGCT	8 cut(s)	9, 196, 311, 890, 917, 1133, 1387, 1490
Alw21I	GWGCWC	3 cut(s)	235, 625, 1389
Alw26I	GTCTC	2 cut(s)	297, 481
AlwI	GGATC	1 cut(s)	130
AlwNI	CAGNNNCTG	2 cut(s)	560, 890
Ama87I	CYCGRG	1 cut(s)	118
AoxI	GGCC	9 cut(s)	24, 66, 186, 199, 679, 1144, 1230, 1476, 1512
ApeKI	GCWGC	4 cut(s)	261, 887, 1400, 1490
ApoI	RAATTY	2 cut(s)	815, 1008
Asp700I	GAANNNNTTC	1 cut(s)	950
AspA2I	CCTAGG	1 cut(s)	1234
AspLEI	GCGC	2 cut(s)	228, 280
AspS9I	GGNCC	4 cut(s)	158, 740, 1076, 1231
AsuC2I	CCSGG	1 cut(s)	162
AsuHPI	GGTGA	5 cut(s)	82, 457, 908, 1073, 1178
AvaI	CYCGRG	1 cut(s)	118
AvaII	GGWCC	3 cut(s)	158, 740, 1076
AvrII	CCTAGG	1 cut(s)	1234
AxyI	CCTNAGG	1 cut(s)	1191
BalI	TGGCCA	1 cut(s)	1146
BanI	GGYRCC	2 cut(s)	242, 1369
BanII	GRGCYC	3 cut(s)	695, 966, 1389
BauI	CACGAG	1 cut(s)	1394
BbsI	GAAGAC	1 cut(s)	712
Bbv12I	GWGCWC	3 cut(s)	235, 625, 1389
BbvI	GCAGC	4 cut(s)	248, 899, 1412, 1477
BccI	CCATC	8 cut(s)	95, 188, 503, 682, 763, 854, 994, 1100
BceAI	ACGGC	2 cut(s)	53, 380
BcgI	CGANNNNNNTGC	2 cut(s)	350, 384
BciT130I	CCWGG	3 cut(s)	579, 1074, 1170
BciVI	GTATCC	1 cut(s)	943
BcnI	CCSGG	1 cut(s)	162
BcoDI	GTCTC	2 cut(s)	297, 481
BcuI	ACTAGT	1 cut(s)	1312
BfaI	CTAG	4 cut(s)	39, 1235, 1313, 1525
BfoI	RGCGCY	1 cut(s)	281
BfuAI	ACCTGC	2 cut(s)	221, 254
BfuI	GTATCC	1 cut(s)	943
BglI	GCCNNNNNGGC	1 cut(s)	185
BglII	AGATCT	1 cut(s)	1347
BlnI	CCTAGG	1 cut(s)	1234
Bme1390I	CCNGG	4 cut(s)	162, 579, 1074, 1170
Bme18I	GGWCC	3 cut(s)	158, 740, 1076
BmeT110I	CYCGRG	1 cut(s)	118
BmgBI	CACGTC	1 cut(s)	57
BmgT120I	GGNCC	4 cut(s)	158, 740, 1076, 1231
BmiI	GGNNCC	4 cut(s)	160, 244, 1167, 1371
BmrFI	CCNGG	4 cut(s)	162, 579, 1074, 1170
BmsI	GCATC	4 cut(s)	225, 1291, 1411, 1433
BpiI	GAAGAC	1 cut(s)	712
BplI	GAGNNNNNCTC	2 cut(s)	677, 709
BpmI	CTGGAG	1 cut(s)	876
BpuEI	CTTGAG	3 cut(s)	188, 704, 818
BpuMI	CCSGG	1 cut(s)	162
Bsa29I	ATCGAT	1 cut(s)	360
BsaHI	GRCGYC	2 cut(s)	138, 1239
BsaJI	CCNNGG	8 cut(s)	103, 117, 273, 578, 1169, 1234, 1287, 1494
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 98, 849, 879
Bsc4I	CCNNNNNNNGG	6 cut(s)	688, 760, 890, 942, 1270, 1379
Bse1I	ACTGG	2 cut(s)	622, 915
Bse21I	CCTNAGG	1 cut(s)	1191
Bse3DI	GCAATG	3 cut(s)	546, 1409, 1437
BseBI	CCWGG	3 cut(s)	579, 1074, 1170
BseCI	ATCGAT	1 cut(s)	360
BseDI	CCNNGG	8 cut(s)	103, 117, 273, 578, 1169, 1234, 1287, 1494
BseGI	GGATG	3 cut(s)	816, 1111, 1459
BseLI	CCNNNNNNNGG	6 cut(s)	688, 760, 890, 942, 1270, 1379
BseMI	GCAATG	3 cut(s)	546, 1409, 1437
BseMII	CTCAG	5 cut(s)	708, 708, 1182, 1206, 1320
BseNI	ACTGG	2 cut(s)	622, 915
BseRI	GAGGAG	1 cut(s)	1232
BseXI	GCAGC	4 cut(s)	248, 899, 1412, 1477
BseYI	CCCAGC	1 cut(s)	192
Bsh1236I	CGCG	3 cut(s)	105, 228, 1446
BshFI	GGCC	9 cut(s)	26, 68, 188, 201, 681, 1146, 1232, 1478, 1514
BshNI	GGYRCC	2 cut(s)	242, 1369
BshVI	ATCGAT	1 cut(s)	360
BsiHKAI	GWGCWC	3 cut(s)	235, 625, 1389
BsiHKCI	CYCGRG	1 cut(s)	118
BsiSI	CCGG	1 cut(s)	162
BslFI	GGGAC	2 cut(s)	364, 737
BslI	CCNNNNNNNGG	6 cut(s)	688, 760, 890, 942, 1270, 1379
BsmAI	GTCTC	2 cut(s)	297, 481
BsmBI	CGTCTC	2 cut(s)	297, 481
BsmFI	GGGAC	2 cut(s)	364, 737
BsmI	GAATGC	1 cut(s)	316
BsnI	GGCC	9 cut(s)	26, 68, 188, 201, 681, 1146, 1232, 1478, 1514
BsoBI	CYCGRG	1 cut(s)	118
Bsp1286I	GDGCHC	5 cut(s)	235, 625, 695, 966, 1389
Bsp143I	GATC	3 cut(s)	122, 357, 1347
Bsp19I	CCATGG	1 cut(s)	1494
BspANI	GGCC	9 cut(s)	26, 68, 188, 201, 681, 1146, 1232, 1478, 1514
BspCNI	CTCAG	5 cut(s)	707, 709, 1183, 1207, 1321
BspDI	ATCGAT	1 cut(s)	360
BspFNI	CGCG	3 cut(s)	105, 228, 1446
BspLI	GGNNCC	4 cut(s)	160, 244, 1167, 1371
BspMI	ACCTGC	2 cut(s)	221, 254
BspPI	GGATC	1 cut(s)	130
BspT107I	GGYRCC	2 cut(s)	242, 1369
BsrDI	GCAATG	3 cut(s)	546, 1409, 1437
BsrI	ACTGG	2 cut(s)	622, 915
BssECI	CCNNGG	8 cut(s)	103, 117, 273, 578, 1169, 1234, 1287, 1494
BssMI	GATC	3 cut(s)	122, 357, 1347
BssNI	GRCGYC	2 cut(s)	138, 1239
BssSI	CACGAG	1 cut(s)	1394
BssT1I	CCWWGG	4 cut(s)	273, 1234, 1287, 1494
Bst2BI	CACGAG	1 cut(s)	1394
Bst2UI	CCWGG	3 cut(s)	579, 1074, 1170
Bst4CI	ACNGT	2 cut(s)	523, 727
Bst6I	CTCTTC	1 cut(s)	1095
BstACI	GRCGYC	2 cut(s)	138, 1239
BstAPI	GCANNNNNTGC	2 cut(s)	11, 1376
BstC8I	GCNNGC	5 cut(s)	7, 369, 779, 1086, 1444
BstDEI	CTNAG	5 cut(s)	694, 717, 1191, 1215, 1329
BstDSI	CCRYGG	2 cut(s)	103, 1494
BstEII	GGTNACC	1 cut(s)	583
BstF5I	GGATG	3 cut(s)	816, 1111, 1459
BstFNI	CGCG	3 cut(s)	105, 228, 1446
BstH2I	RGCGCY	1 cut(s)	281
BstHHI	GCGC	2 cut(s)	228, 280
BstKTI	GATC	3 cut(s)	125, 360, 1350
BstMAI	GTCTC	2 cut(s)	297, 481
BstMBI	GATC	3 cut(s)	122, 357, 1347
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 162, 185, 246, 787, 1094, 1376, 1406, 1496
BstNI	CCWGG	3 cut(s)	579, 1074, 1170
BstNSI	RCATGY	2 cut(s)	301, 1119
BstPI	GGTNACC	1 cut(s)	583
BstSCI	CCNGG	4 cut(s)	160, 577, 1072, 1168
BstUI	CGCG	3 cut(s)	105, 228, 1446
BstV1I	GCAGC	4 cut(s)	248, 899, 1412, 1477
BstV2I	GAAGAC	1 cut(s)	712
BstX2I	RGATCY	2 cut(s)	122, 1347
BstYI	RGATCY	2 cut(s)	122, 1347
Bsu15I	ATCGAT	1 cut(s)	360
Bsu36I	CCTNAGG	1 cut(s)	1191
BsuI	GTATCC	1 cut(s)	943
BsuRI	GGCC	9 cut(s)	26, 68, 188, 201, 681, 1146, 1232, 1478, 1514
BsuTUI	ATCGAT	1 cut(s)	360
BtgI	CCRYGG	2 cut(s)	103, 1494
BtrI	CACGTC	1 cut(s)	57
BtsCI	GGATG	3 cut(s)	816, 1111, 1459
BtsIMutI	CAGTG	2 cut(s)	501, 908
BveI	ACCTGC	2 cut(s)	221, 254
Cac8I	GCNNGC	5 cut(s)	7, 369, 779, 1086, 1444
CaiI	CAGNNNCTG	2 cut(s)	560, 890
CfoI	GCGC	2 cut(s)	228, 280
Cfr13I	GGNCC	4 cut(s)	158, 740, 1076, 1231
Cfr42I	CCGCGG	1 cut(s)	106
ClaI	ATCGAT	1 cut(s)	360
CseI	GACGC	2 cut(s)	1188, 1228
Csp6I	GTAC	2 cut(s)	301, 821
CviQI	GTAC	2 cut(s)	301, 821
DdeI	CTNAG	5 cut(s)	694, 717, 1191, 1215, 1329
DpnI	GATC	3 cut(s)	124, 359, 1349
DpnII	GATC	3 cut(s)	122, 357, 1347
DraI	TTTAAA	1 cut(s)	325
DrdI	GACNNNNNNGTC	2 cut(s)	137, 143
DseDI	GACNNNNNNGTC	2 cut(s)	137, 143
EaeI	YGGCCR	1 cut(s)	1144
Eam1104I	CTCTTC	1 cut(s)	1095
EarI	CTCTTC	1 cut(s)	1095
EciI	GGCGGA	2 cut(s)	34, 171
Ecl136II	GAGCTC	1 cut(s)	1387
Eco130I	CCWWGG	4 cut(s)	273, 1234, 1287, 1494
Eco147I	AGGCCT	2 cut(s)	26, 1478
Eco24I	GRGCYC	3 cut(s)	695, 966, 1389
Eco47I	GGWCC	3 cut(s)	158, 740, 1076
Eco53kI	GAGCTC	1 cut(s)	1387
Eco57I	CTGAAG	1 cut(s)	1326
Eco81I	CCTNAGG	1 cut(s)	1191
Eco88I	CYCGRG	1 cut(s)	118
Eco91I	GGTNACC	1 cut(s)	583
EcoICRI	GAGCTC	1 cut(s)	1387
EcoO109I	RGGNCCY	1 cut(s)	1231
EcoO65I	GGTNACC	1 cut(s)	583
EcoRII	CCWGG	3 cut(s)	577, 1072, 1168
EcoT14I	CCWWGG	4 cut(s)	273, 1234, 1287, 1494
EcoT22I	ATGCAT	1 cut(s)	1426
EcoT38I	GRGCYC	3 cut(s)	695, 966, 1389
ErhI	CCWWGG	4 cut(s)	273, 1234, 1287, 1494
Esp3I	CGTCTC	2 cut(s)	297, 481
FaqI	GGGAC	2 cut(s)	364, 737
FauI	CCCGC	2 cut(s)	110, 506
FokI	GGATG	3 cut(s)	823, 1118, 1446
FriOI	GRGCYC	3 cut(s)	695, 966, 1389
FspBI	CTAG	4 cut(s)	39, 1235, 1313, 1525
GlaI	GCGC	2 cut(s)	227, 279
GsaI	CCCAGC	1 cut(s)	196
GsuI	CTGGAG	1 cut(s)	876
HaeII	RGCGCY	1 cut(s)	281
HaeIII	GGCC	9 cut(s)	26, 68, 188, 201, 681, 1146, 1232, 1478, 1514
HapII	CCGG	1 cut(s)	162
HgaI	GACGC	2 cut(s)	1188, 1228
HhaI	GCGC	2 cut(s)	228, 280
Hin1I	GRCGYC	2 cut(s)	138, 1239
Hin6I	GCGC	2 cut(s)	226, 278
HinP1I	GCGC	2 cut(s)	226, 278
HincII	GTYRAC	1 cut(s)	873
HindII	GTYRAC	1 cut(s)	873
HindIII	AAGCTT	1 cut(s)	7
HinfI	GANTC	3 cut(s)	417, 764, 946
HpaII	CCGG	1 cut(s)	162
HphI	GGTGA	5 cut(s)	82, 457, 908, 1073, 1178
Hpy166II	GTNNAC	3 cut(s)	873, 1153, 1360
Hpy188I	TCNGA	8 cut(s)	64, 127, 357, 408, 562, 637, 718, 769
Hpy188III	TCNNGA	8 cut(s)	39, 120, 205, 220, 433, 855, 1318, 1394
Hpy8I	GTNNAC	3 cut(s)	873, 1153, 1360
Hpy99I	CGWCG	8 cut(s)	61, 64, 140, 143, 146, 176, 260, 1244
HpyAV	CCTTC	8 cut(s)	16, 41, 91, 106, 416, 1222, 1301, 1477
HpyCH4III	ACNGT	2 cut(s)	523, 727
HpyCH4IV	ACGT	4 cut(s)	56, 138, 171, 255
HpyCH4V	TGCA	9 cut(s)	216, 264, 316, 1055, 1115, 1379, 1414, 1424, 1457
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 162, 185, 246, 787, 1094, 1376, 1406, 1496
HpyF3I	CTNAG	5 cut(s)	694, 717, 1191, 1215, 1329
HpySE526I	ACGT	4 cut(s)	56, 138, 171, 255
Hsp92I	GRCGYC	2 cut(s)	138, 1239
HspAI	GCGC	2 cut(s)	226, 278
KspI	CCGCGG	1 cut(s)	106
Kzo9I	GATC	3 cut(s)	122, 357, 1347
LmnI	GCTCC	2 cut(s)	665, 1219
Lsp1109I	GCAGC	4 cut(s)	248, 899, 1412, 1477
LweI	GCATC	4 cut(s)	225, 1291, 1411, 1433
MaeI	CTAG	4 cut(s)	39, 1235, 1313, 1525
MaeII	ACGT	4 cut(s)	56, 138, 171, 255
MaeIII	GTNAC	3 cut(s)	445, 583, 1030
MalI	GATC	3 cut(s)	124, 359, 1349
MboI	GATC	3 cut(s)	122, 357, 1347
MboII	GAAGA	5 cut(s)	275, 448, 610, 717, 1112
MfeI	CAATTG	1 cut(s)	1056
MflI	RGATCY	2 cut(s)	122, 1347
MhlI	GDGCHC	5 cut(s)	235, 625, 695, 966, 1389
MlsI	TGGCCA	1 cut(s)	1146
MluCI	AATT	4 cut(s)	782, 815, 1008, 1056
MluNI	TGGCCA	1 cut(s)	1146
MmeI	TCCRAC	6 cut(s)	42, 75, 643, 1186, 1234, 1487
Mox20I	TGGCCA	1 cut(s)	1146
Mph1103I	ATGCAT	1 cut(s)	1426
MroXI	GAANNNNTTC	1 cut(s)	950
MscI	TGGCCA	1 cut(s)	1146
MseI	TTAA	3 cut(s)	324, 339, 456
Msp20I	TGGCCA	1 cut(s)	1146
MspA1I	CMGCKG	3 cut(s)	105, 890, 938
MspI	CCGG	1 cut(s)	162
MspR9I	CCNGG	4 cut(s)	162, 579, 1074, 1170
MunI	CAATTG	1 cut(s)	1056
Mva1269I	GAATGC	1 cut(s)	316
MvaI	CCWGG	3 cut(s)	579, 1074, 1170
MvnI	CGCG	3 cut(s)	105, 228, 1446
MwoI	GCNNNNNNNGC	9 cut(s)	11, 162, 185, 246, 787, 1094, 1376, 1406, 1496
NciI	CCSGG	1 cut(s)	162
NcoI	CCATGG	1 cut(s)	1494
NdeII	GATC	3 cut(s)	122, 357, 1347
NlaIV	GGNNCC	4 cut(s)	160, 244, 1167, 1371
NmeAIII	GCCGAG	2 cut(s)	177, 216
NmuCI	GTSAC	1 cut(s)	445
NsiI	ATGCAT	1 cut(s)	1426
NspI	RCATGY	2 cut(s)	301, 1119
PaqCI	CACCTGC	2 cut(s)	221, 254
PceI	AGGCCT	2 cut(s)	26, 1478
PciI	ACATGT	1 cut(s)	297
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 141
PctI	GAATGC	1 cut(s)	316
PdmI	GAANNNNTTC	1 cut(s)	950
PfeI	GAWTC	3 cut(s)	417, 764, 946
PflFI	GACNNNGTC	1 cut(s)	140
PflMI	CCANNNNNTGG	1 cut(s)	890
PfoI	TCCNGGA	1 cut(s)	1072
PscI	ACATGT	1 cut(s)	297
Psp124BI	GAGCTC	1 cut(s)	1389
Psp6I	CCWGG	3 cut(s)	577, 1072, 1168
PspEI	GGTNACC	1 cut(s)	583
PspFI	CCCAGC	1 cut(s)	192
PspGI	CCWGG	3 cut(s)	577, 1072, 1168
PspN4I	GGNNCC	4 cut(s)	160, 244, 1167, 1371
PspPI	GGNCC	4 cut(s)	158, 740, 1076, 1231
PsrI	GAACNNNNNNTAC	2 cut(s)	1023, 1055
PstNI	CAGNNNCTG	2 cut(s)	560, 890
PsuI	RGATCY	2 cut(s)	122, 1347
PsyI	GACNNNGTC	1 cut(s)	140
PvuII	CAGCTG	1 cut(s)	890
RsaI	GTAC	2 cut(s)	302, 822
RsaNI	GTAC	2 cut(s)	301, 821
SacI	GAGCTC	1 cut(s)	1389
SacII	CCGCGG	1 cut(s)	106
SaqAI	TTAA	3 cut(s)	324, 339, 456
Sau3AI	GATC	3 cut(s)	122, 357, 1347
Sau96I	GGNCC	4 cut(s)	158, 740, 1076, 1231
ScrFI	CCNGG	4 cut(s)	162, 579, 1074, 1170
SduI	GDGCHC	5 cut(s)	235, 625, 695, 966, 1389
SfaNI	GCATC	4 cut(s)	225, 1291, 1411, 1433
Sfr303I	CCGCGG	1 cut(s)	106
SgrBI	CCGCGG	1 cut(s)	106
SinI	GGWCC	3 cut(s)	158, 740, 1076
SmlI	CTYRAG	3 cut(s)	203, 683, 797
SmoI	CTYRAG	3 cut(s)	203, 683, 797
SpeI	ACTAGT	1 cut(s)	1312
Sse9I	AATT	4 cut(s)	782, 815, 1008, 1056
SseBI	AGGCCT	2 cut(s)	26, 1478
SspI	AATATT	1 cut(s)	541
SspMI	CTAG	4 cut(s)	39, 1235, 1313, 1525
SstI	GAGCTC	1 cut(s)	1389
StuI	AGGCCT	2 cut(s)	26, 1478
StyD4I	CCNGG	4 cut(s)	160, 577, 1072, 1168
StyI	CCWWGG	4 cut(s)	273, 1234, 1287, 1494
TaaI	ACNGT	2 cut(s)	523, 727
TaiI	ACGT	4 cut(s)	59, 141, 174, 258
TaqI	TCGA	6 cut(s)	219, 345, 360, 420, 966, 1242
TasI	AATT	4 cut(s)	782, 815, 1008, 1056
TatI	WGTACW	1 cut(s)	820
TauI	GCSGC	6 cut(s)	108, 156, 168, 179, 191, 243
TfiI	GAWTC	3 cut(s)	417, 764, 946
Tru1I	TTAA	3 cut(s)	324, 339, 456
Tru9I	TTAA	3 cut(s)	324, 339, 456
TscAI	CASTG	2 cut(s)	501, 915
TseFI	GTSAC	1 cut(s)	445
TseI	GCWGC	4 cut(s)	261, 887, 1400, 1490
Tsp45I	GTSAC	1 cut(s)	445
TspDTI	ATGAA	8 cut(s)	275, 309, 321, 501, 827, 1035, 1040, 1117
TspRI	CASTG	2 cut(s)	501, 915
Tth111I	GACNNNGTC	1 cut(s)	140
Van91I	CCANNNNNTGG	1 cut(s)	890
VpaK11BI	GGWCC	3 cut(s)	158, 740, 1076
XapI	RAATTY	2 cut(s)	815, 1008
XbaI	TCTAGA	1 cut(s)	38
XceI	RCATGY	2 cut(s)	301, 1119
XmaJI	CCTAGG	1 cut(s)	1234
XmnI	GAANNNNTTC	1 cut(s)	950
XspI	CTAG	4 cut(s)	39, 1235, 1313, 1525
ZraI	GACGTC	1 cut(s)	139
Zsp2I	ATGCAT	1 cut(s)	1426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.