Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0012732

Physical Location & Seq

Genomic Coordinates Forward (+)

12025079 .. 12029428

Gene Structure 4350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2655 bp

ATGGTGAGTAGACTGATGGAAGCATGTTGTTTGAAGGACAAGGAGAAGGGAGATGACGATGAGAAGCCAGATTACATGGTGAGTGGGGGCAACAGAATCAGAGGAAAAGTTGTGTTGATGAAGAAGAATGTGTTGGACTTCAACGACCTCAAAGCTTCGGTCGTTGATAGAATCCATGAGCTCTTGGGCAAAGGTGTTTCCATGCAGCTCATCAGTGCCACTCATCCTGAACCAGCAGCAAATGGATTGAAATCGAGAGGGAAGCTTGGAGAGGTAGCTTACTTGGAGAAATGGGTTACAACGACTACATCTTTGTCGGCAGGAGAAGCTAGTTTCTCCATTTCCTTGGATTGGGATGAGTCTCATGGTGTTCCTGGGGCATTGTTGATCAGAAACCACCACCATAGCCAATTCTACCTCAAGACAATAACATTAGAAGACGTTCCTGGGCACGGTCAACTCCATTTTGTCTGCAATTCTTGGATTTACCCAGCACATCGTTACAAGTACAATAGAATATTTTTCCCCAACAAGGCCTACCTGCCATCTAAAACACCTGAGCTACTACACCCTTACAGGGAAGATGAACTCGTTAATCTCCGAGGGAGTGGATCAGGCGAACTAAAGGAGTGGGACAGAGTCTATGACTATGCTTATTACAATGATTTAGGTAGTCCAGACAAGGGTCCAGAATATGCCCGCCCTGCACTTGGTGGGTCGAACGAGTATCCATATCCAAGAAGAGGAAGAACTGGTCGAGAACCAACTAAAACCGACCCCAATTCCGAGAGCAGACTGCCGCTTCTAAGTCTAGACATTTACGTTCCGAGAGATGAGCGGTTTGGCCACGTGAAGTTTTCAGATTTTCTTGCCTATGGCCTGAAATCCCTGGTTCAAATATTGCTTCCAGAACTTAAGTCTTTGTGCGATAAAACTATCAACGAGTTTGACACCTTTGAGGATGTACTTAATCTCTATGACGGAGGTATCAAGCTACCAAATGGACCTGCTCTCAAGAAAATACGGGAGTGCATCCCTTGGGAGCTGCTTAAGGAACTGATTCGGTCAGATGGCGAGCGATTTCTCAAGTTTCCAATGCCTGATGTGATTAAAAGAGATAGGTCTGCATGGAGGACAGACGAAGAGTTTGCACGAGAAATGCTAGCAGGGGTGAACCCTGTTAACATCACCCGCCTCCAAGAGTTTCCCCCAGTTAGCAAGCTAGACCCAAAAGTGTACGGGAATCAGCACAGTTCGATAAGAGAAGAGCACATTGCAAGCAACATGAATGGCCTCACGGTTAGTGAGGCAATTGAAAGTAACAGGCTGTTCATATTAGATCATCATGATGCATTAATGATATACCTGAGGCGAATAAACTCTACGCACACAAAGACGTATGCCACCAGAACTCTCCTCTTGCTCCAAGAAGACGGGACATTGAAGCCTTTGGCAATTGAGTTGAGCTTACCACATCCACAAGGGGACCATTATGGTTGTGTCAGTACAGTCTTCACTCCACCAGGACAAGGAAAAAAAGGCATCGAGGAGTCGGTGTGGCAGCTTGCGAAAGTTTATGCTGCTGTAAATGATTCTGGATATCATCAGCTTATCAGCCACTGGTTAAACACACATGCTGTGATAGAGCCATTTGTGATTGCAACACATAGACAGTTGAGTGTGCTTCACCCGATACATAAGCTTTTGCATCCGCACTTCCGGGACACAATGAACATAAATGCCCTGGCCAGGCAAATCCTCATCAATGCTGATGGGGTACTTGAGAAAACAGTCTTCCCAGGTCGATTCTCCATGGAAATGTCAGCCGTTATTTATAAGGGCTGGGTCTTCACCGACCAGGCATTACCTGCTGACTTATGCAAGAGAGGAATGGCAGTTCTAGATAAGACCTGTCCTCATGGCCTCAGACTTCTGATTGAAGATTACCCATTTGCTGTTGATGGGCTAGAAATCTGGTCGGCGATTCAAACTTGGGTTGATGAATACTGCTGTTTGTACTATGAATCAGATGATGCGGTCCAAGGTGATTCTGAACTCCAGGACTGGTGGACAGAGCTCCGCAATGTAGGCCACGGTGACAAGAAGAATGAACCATGGTGGCCTAAGATGCAAACAAGAGATGAACTTATTGAATCATGTACCATAATTATATGGGTGGCTTCTGCCCTCCATGCAGCTGTCAATTTCGGGCAATACTCTTATGCTGGTTACCTCCCTAACCGCCCAACTGTAAGCCGACGCTTCATGCCTGAGGCAGGCACTGCTGAATATGCTGAGCTTGAGTCCAACCCTGACGCAGCTTTCCTCAAAACAATTACAGCTCAATTGCAAACTCTCCTTGGTGTATCTCTGATAGAGATTTTATCACGACATTCAACTGATGAGGTTTATCTTGGGCAAAACGATACTCCTGAGTGGACTTCAGATGCTGAAGCACTAGCAGCATTTGCAAGATTTGGAGAGAAGCTGATGGACATCGAAAAGAGAATCAATGAAAGGAACAAGGATATGAGATTGAAGAACAGAGTTGGGCCTGTAGACATGCCTTATACCTTGCTCTATCCTAACACATCAGACAAGAGTAGAGAGGGTGGACTCACTGGAAAAGGAATTCCCAACAGTGTCTCAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0016491 GO:0016701 GO:0016702 GO:0022622 GO:0030258 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0034440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0051213 GO:0055114 GO:0065007 GO:0071704 GO:0080134 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1900366 GO:1905392 GO:1905393 GO:1990136 GO:2000068

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

885

Amino Acids

100.16

Weight (kDa)

5.95

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	83 - 175	3.1e-20	PLAT/LH2 domain
Lipoxygenase	PF00305	189 - 862	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22400
fragaria_vesca	FvH4_4g15250 FvH4_4g15250 FvH4_4g15250
malus_domestica	MD13G1191200.v1.1 MD16G1191300.v1.1
prunus_persica	Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1 Prupe.1G011400_v2.0.a1
pyrus_communis	pycom13g16410 pycom16g16100
rosa_chinensis	RchiOBHm_Chr4g0416591
rosa_laevigata	RLG00000007969
rosa_roxburghii	Rroxscaffold_5G00360470
rosa_rugosa	Rorug04G0143200
rosa_samantha	Rh4BG203100 Rh4CG216500
rosa_wichuraiana	Rw4G017400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1836
Acc36I	ACCTGC	3 cut(s)	549, 1015, 1876
AccBSI	CCGCTC	1 cut(s)	838
AccI	GTMKAC	2 cut(s)	10, 2559
AciI	CCGC	8 cut(s)	700, 800, 838, 1192, 1712, 2036, 2080, 2242
AclWI	GGATC	1 cut(s)	619
AcoI	YGGCCR	2 cut(s)	844, 1746
AcsI	RAATTY	1 cut(s)	2631
AcuI	CTGAAG	2 cut(s)	2427, 2472
AcvI	CACGTG	1 cut(s)	850
AdeI	CACNNNGTG	1 cut(s)	713
AfaI	GTAC	7 cut(s)	509, 966, 1238, 1507, 1779, 2018, 2161
AflII	CTTAAG	2 cut(s)	914, 1049
AjnI	CCWGG	9 cut(s)	373, 445, 888, 1522, 1743, 1748, 1798, 1857, 2058
AjuI	GAANNNNNNNTTGG	2 cut(s)	116, 148
AloI	GAACNNNNNNTCC	2 cut(s)	1881, 1913
Alw21I	GWGCWC	3 cut(s)	183, 1272, 2079
Alw26I	GTCTC	2 cut(s)	366, 2650
AlwI	GGATC	1 cut(s)	619
AlwNI	CAGNNNCTG	3 cut(s)	1620, 2282, 2450
AoxI	GGCC	9 cut(s)	534, 844, 877, 1291, 1746, 1921, 2089, 2120, 2552
ApeKI	GCWGC	8 cut(s)	205, 236, 1045, 1561, 1580, 2195, 2318, 2462
ApoI	RAATTY	1 cut(s)	2631
ArsI	GACNNNNNNTTYG	6 cut(s)	144, 176, 295, 327, 1130, 1162
AseI	ATTAAT	1 cut(s)	1355
Asp700I	GAANNNNTTC	2 cut(s)	441, 1059
AspS9I	GGNCC	5 cut(s)	686, 1004, 1486, 2038, 2552
AsuC2I	CCSGG	1 cut(s)	1721
AsuHPI	GGTGA	8 cut(s)	16, 91, 1180, 1183, 1679, 1843, 2057, 2108
AsuNHI	GCTAGC	1 cut(s)	1162
AvaII	GGWCC	4 cut(s)	686, 1004, 1486, 2038
AxyI	CCTNAGG	2 cut(s)	1367, 2271
BaeGI	GKGCMC	1 cut(s)	453
BaeI	ACNNNNGTAYC	2 cut(s)	970, 1003
BalI	TGGCCA	2 cut(s)	846, 1748
BanII	GRGCYC	2 cut(s)	183, 2079
BarI	GAAGNNNNNNTAC	2 cut(s)	56, 88
BauI	CACGAG	1 cut(s)	1152
BbrPI	CACGTG	1 cut(s)	850
BbsI	GAAGAC	5 cut(s)	444, 1437, 1504, 1786, 1840
Bbv12I	GWGCWC	3 cut(s)	183, 1272, 2079
BbvI	GCAGC	8 cut(s)	217, 248, 1032, 1567, 1573, 2207, 2330, 2474
BccI	CCATC	6 cut(s)	10, 553, 1064, 1766, 1955, 2485
BceAI	ACGGC	1 cut(s)	1811
BcgI	CGANNNNNNTGC	2 cut(s)	1130, 1164
BciT130I	CCWGG	9 cut(s)	375, 447, 890, 1524, 1745, 1750, 1800, 1859, 2060
BciVI	GTATCC	1 cut(s)	738
BclI	TGATCA	1 cut(s)	387
BcnI	CCSGG	1 cut(s)	1721
BcoDI	GTCTC	2 cut(s)	366, 2650
BfaI	CTAG	7 cut(s)	330, 812, 1163, 1223, 1901, 1967, 2459
BfmI	CTRYAG	1 cut(s)	2556
BfrI	CTTAAG	2 cut(s)	914, 1049
BfuAI	ACCTGC	3 cut(s)	549, 1015, 1876
BfuI	GTATCC	1 cut(s)	738
BisI	GCNGC	9 cut(s)	206, 237, 800, 1046, 1562, 1581, 2196, 2319, 2463
BlpI	GCTNAGC	1 cut(s)	2295
BlsI	GCNGC	9 cut(s)	207, 238, 801, 1047, 1563, 1582, 2197, 2320, 2464
Bme18I	GGWCC	4 cut(s)	686, 1004, 1486, 2038
BmgT120I	GGNCC	5 cut(s)	686, 1004, 1486, 2038, 2552
BmiI	GGNNCC	2 cut(s)	687, 1487
BmrI	ACTGGG	1 cut(s)	1205
BmsI	GCATC	7 cut(s)	1041, 1339, 1551, 1717, 2023, 2118, 2437
BmtI	GCTAGC	1 cut(s)	1166
BmuI	ACTGGG	1 cut(s)	1205
BoxI	GACNNNNGTC	1 cut(s)	684
BpiI	GAAGAC	5 cut(s)	444, 1437, 1504, 1786, 1840
BpmI	CTGGAG	1 cut(s)	2042
Bpu10I	CCTNAGC	1 cut(s)	558
Bpu1102I	GCTNAGC	1 cut(s)	2295
BpuEI	CTTGAG	5 cut(s)	404, 998, 1070, 1802, 2321
BpuMI	CCSGG	1 cut(s)	1721
BsaAI	YACGTR	1 cut(s)	850
BsaBI	GATNNNNATC	2 cut(s)	250, 2495
BsaXI	ACNNNNNCTCC	2 cut(s)	1541, 1571
Bse1I	ACTGG	5 cut(s)	757, 1211, 1625, 2069, 2626
Bse21I	CCTNAGG	2 cut(s)	1367, 2271
Bse3DI	GCAATG	2 cut(s)	1272, 2089
Bse8I	GATNNNNATC	2 cut(s)	250, 2495
BseBI	CCWGG	9 cut(s)	375, 447, 890, 1524, 1745, 1750, 1800, 1859, 2060
BseGI	GGATG	6 cut(s)	223, 361, 967, 1032, 1474, 1708
BseJI	GATNNNNATC	2 cut(s)	250, 2495
BseMI	GCAATG	2 cut(s)	1272, 2089
BseMII	CTCAG	6 cut(s)	549, 1358, 1939, 2262, 2286, 2424
BseNI	ACTGG	5 cut(s)	757, 1211, 1625, 2069, 2626
BseRI	GAGGAG	2 cut(s)	1406, 1562
BseSI	GKGCMC	1 cut(s)	453
BseXI	GCAGC	8 cut(s)	217, 248, 1032, 1567, 1573, 2207, 2330, 2474
BseYI	CCCAGC	2 cut(s)	490, 1842
BsgI	GTGCAG	1 cut(s)	690
Bsh1285I	CGRYCG	1 cut(s)	162
BshFI	GGCC	9 cut(s)	536, 846, 879, 1293, 1748, 1923, 2091, 2122, 2554
BsiEI	CGRYCG	1 cut(s)	162
BsiHKAI	GWGCWC	3 cut(s)	183, 1272, 2079
BsiSI	CCGG	1 cut(s)	1720
BslFI	GGGAC	4 cut(s)	647, 1450, 1499, 1736
BsmAI	GTCTC	2 cut(s)	366, 2650
BsmFI	GGGAC	4 cut(s)	647, 1450, 1499, 1736
BsnI	GGCC	9 cut(s)	536, 846, 879, 1293, 1748, 1923, 2091, 2122, 2554
Bsp1286I	GDGCHC	4 cut(s)	183, 453, 1272, 2079
Bsp143I	GATC	3 cut(s)	387, 611, 1339
Bsp1720I	GCTNAGC	1 cut(s)	2295
Bsp19I	CCATGG	2 cut(s)	1812, 2114
BspACI	CCGC	8 cut(s)	700, 800, 838, 1192, 1712, 2036, 2080, 2242
BspANI	GGCC	9 cut(s)	536, 846, 879, 1293, 1748, 1923, 2091, 2122, 2554
BspCNI	CTCAG	6 cut(s)	550, 1359, 1938, 2263, 2287, 2425
BspHI	TCATGA	1 cut(s)	1345
BspLI	GGNNCC	2 cut(s)	687, 1487
BspMI	ACCTGC	3 cut(s)	549, 1015, 1876
BspOI	GCTAGC	1 cut(s)	1166
BspPI	GGATC	1 cut(s)	619
BspQI	GCTCTTC	1 cut(s)	1260
BspTI	CTTAAG	2 cut(s)	914, 1049
BsrBI	CCGCTC	1 cut(s)	838
BsrDI	GCAATG	2 cut(s)	1272, 2089
BsrI	ACTGG	5 cut(s)	757, 1211, 1625, 2069, 2626
BssMI	GATC	3 cut(s)	387, 611, 1339
BssSI	CACGAG	1 cut(s)	1152
BssT1I	CCWWGG	6 cut(s)	345, 1037, 1812, 2041, 2114, 2359
Bst2BI	CACGAG	1 cut(s)	1152
Bst2UI	CCWGG	9 cut(s)	375, 447, 890, 1524, 1745, 1750, 1800, 1859, 2060
Bst4CI	ACNGT	9 cut(s)	455, 1253, 1300, 1510, 1674, 1792, 2096, 2251, 2642
Bst6I	CTCTTC	3 cut(s)	736, 1137, 1260
BstAFI	CTTAAG	2 cut(s)	914, 1049
BstAPI	GCANNNNNTGC	3 cut(s)	1868, 2282, 2468
BstBAI	YACGTR	1 cut(s)	850
BstC8I	GCNNGC	7 cut(s)	700, 1076, 1164, 1220, 1279, 1566, 2278
BstDEI	CTNAG	8 cut(s)	558, 806, 1367, 1925, 2124, 2271, 2295, 2433
BstDSI	CCRYGG	3 cut(s)	1812, 2092, 2114
BstEII	GGTNACC	1 cut(s)	2228
BstENI	CCTNNNNNAGG	1 cut(s)	2274
BstF5I	GGATG	6 cut(s)	223, 361, 967, 1032, 1474, 1708
BstKTI	GATC	3 cut(s)	390, 614, 1342
BstMAI	GTCTC	2 cut(s)	366, 2650
BstMBI	GATC	3 cut(s)	387, 611, 1339
BstMCI	CGRYCG	1 cut(s)	162
BstNI	CCWGG	9 cut(s)	375, 447, 890, 1524, 1745, 1750, 1800, 1859, 2060
BstNSI	RCATGY	3 cut(s)	27, 1637, 2566
BstPAI	GACNNNNGTC	1 cut(s)	684
BstPI	GGTNACC	1 cut(s)	2228
BstSFI	CTRYAG	1 cut(s)	2556
BstSLI	GKGCMC	1 cut(s)	453
BstV1I	GCAGC	8 cut(s)	217, 248, 1032, 1567, 1573, 2207, 2330, 2474
BstV2I	GAAGAC	5 cut(s)	444, 1437, 1504, 1786, 1840
BstXI	CCANNNNNNTGG	1 cut(s)	346
Bsu36I	CCTNAGG	2 cut(s)	1367, 2271
BsuI	GTATCC	1 cut(s)	738
BsuRI	GGCC	9 cut(s)	536, 846, 879, 1293, 1748, 1923, 2091, 2122, 2554
BtgI	CCRYGG	3 cut(s)	1812, 2092, 2114
BtsCI	GGATG	6 cut(s)	223, 361, 967, 1032, 1474, 1708
BtsI	GCAGTG	1 cut(s)	2280
BtsIMutI	CAGTG	5 cut(s)	220, 1618, 2280, 2619, 2647
BveI	ACCTGC	3 cut(s)	549, 1015, 1876
Cac8I	GCNNGC	7 cut(s)	700, 1076, 1164, 1220, 1279, 1566, 2278
CaiI	CAGNNNCTG	3 cut(s)	1620, 2282, 2450
CciI	TCATGA	1 cut(s)	1345
Cfr13I	GGNCC	5 cut(s)	686, 1004, 1486, 2038, 2552
CseI	GACGC	2 cut(s)	2268, 2324
Csp6I	GTAC	7 cut(s)	508, 965, 1237, 1506, 1778, 2017, 2160
CviQI	GTAC	7 cut(s)	508, 965, 1237, 1506, 1778, 2017, 2160
DdeI	CTNAG	8 cut(s)	558, 806, 1367, 1925, 2124, 2271, 2295, 2433
DpnI	GATC	3 cut(s)	389, 613, 1341
DpnII	GATC	3 cut(s)	387, 611, 1339
DraIII	CACNNNGTG	1 cut(s)	713
EaeI	YGGCCR	2 cut(s)	844, 1746
Eam1104I	CTCTTC	3 cut(s)	736, 1137, 1260
EarI	CTCTTC	3 cut(s)	736, 1137, 1260
Ecl136II	GAGCTC	2 cut(s)	181, 2077
Eco130I	CCWWGG	6 cut(s)	345, 1037, 1812, 2041, 2114, 2359
Eco147I	AGGCCT	1 cut(s)	536
Eco24I	GRGCYC	2 cut(s)	183, 2079
Eco32I	GATATC	1 cut(s)	1601
Eco47I	GGWCC	4 cut(s)	686, 1004, 1486, 2038
Eco53kI	GAGCTC	2 cut(s)	181, 2077
Eco57I	CTGAAG	2 cut(s)	2427, 2472
Eco72I	CACGTG	1 cut(s)	850
Eco81I	CCTNAGG	2 cut(s)	1367, 2271
Eco91I	GGTNACC	1 cut(s)	2228
EcoICRI	GAGCTC	2 cut(s)	181, 2077
EcoNI	CCTNNNNNAGG	1 cut(s)	2274
EcoO65I	GGTNACC	1 cut(s)	2228
EcoRI	GAATTC	1 cut(s)	2631
EcoRII	CCWGG	9 cut(s)	373, 445, 888, 1522, 1743, 1748, 1798, 1857, 2058
EcoRV	GATATC	1 cut(s)	1601
EcoT14I	CCWWGG	6 cut(s)	345, 1037, 1812, 2041, 2114, 2359
EcoT22I	ATGCAT	1 cut(s)	1354
EcoT38I	GRGCYC	2 cut(s)	183, 2079
ErhI	CCWWGG	6 cut(s)	345, 1037, 1812, 2041, 2114, 2359
FaqI	GGGAC	4 cut(s)	647, 1450, 1499, 1736
FauI	CCCGC	2 cut(s)	707, 1199
FbaI	TGATCA	1 cut(s)	387
FblI	GTMKAC	2 cut(s)	10, 2559
Fnu4HI	GCNGC	9 cut(s)	206, 237, 800, 1046, 1562, 1581, 2196, 2319, 2463
FokI	GGATG	6 cut(s)	210, 368, 974, 1019, 1461, 1695
FriOI	GRGCYC	2 cut(s)	183, 2079
Fsp4HI	GCNGC	9 cut(s)	206, 237, 800, 1046, 1562, 1581, 2196, 2319, 2463
FspBI	CTAG	7 cut(s)	330, 812, 1163, 1223, 1901, 1967, 2459
GluI	GCNGC	9 cut(s)	206, 237, 800, 1046, 1562, 1581, 2196, 2319, 2463
GsaI	CCCAGC	2 cut(s)	494, 1846
GsuI	CTGGAG	1 cut(s)	2042
HaeIII	GGCC	9 cut(s)	536, 846, 879, 1293, 1748, 1923, 2091, 2122, 2554
HapII	CCGG	1 cut(s)	1720
HgaI	GACGC	2 cut(s)	2268, 2324
HincII	GTYRAC	2 cut(s)	458, 1183
HindII	GTYRAC	2 cut(s)	458, 1183
HindIII	AAGCTT	3 cut(s)	153, 263, 1700
HpaI	GTTAAC	1 cut(s)	1183
HpaII	CCGG	1 cut(s)	1720
HphI	GGTGA	8 cut(s)	16, 91, 1180, 1183, 1679, 1843, 2057, 2108
Hpy166II	GTNNAC	9 cut(s)	11, 458, 1174, 1183, 1237, 2070, 2439, 2560, 2615
Hpy8I	GTNNAC	9 cut(s)	11, 458, 1174, 1183, 1237, 2070, 2439, 2560, 2615
Hpy99I	CGWCG	1 cut(s)	2262
HpyAV	CCTTC	2 cut(s)	28, 40
HpyCH4III	ACNGT	9 cut(s)	455, 1253, 1300, 1510, 1674, 1792, 2096, 2251, 2642
HpyCH4IV	ACGT	4 cut(s)	441, 822, 849, 1397
HpyF3I	CTNAG	8 cut(s)	558, 806, 1367, 1925, 2124, 2271, 2295, 2433
HpySE526I	ACGT	4 cut(s)	441, 822, 849, 1397
Ksp22I	TGATCA	1 cut(s)	387
KspAI	GTTAAC	1 cut(s)	1183
Kzo9I	GATC	3 cut(s)	387, 611, 1339
LguI	GCTCTTC	1 cut(s)	1260
LmnI	GCTCC	3 cut(s)	1042, 1428, 2082
Lsp1109I	GCAGC	8 cut(s)	217, 248, 1032, 1567, 1573, 2207, 2330, 2474
LweI	GCATC	7 cut(s)	1041, 1339, 1551, 1717, 2023, 2118, 2437
MaeI	CTAG	7 cut(s)	330, 812, 1163, 1223, 1901, 1967, 2459
MaeII	ACGT	4 cut(s)	441, 822, 849, 1397
MaeIII	GTNAC	5 cut(s)	295, 500, 1319, 2096, 2228
MalI	GATC	3 cut(s)	389, 613, 1341
MbiI	CCGCTC	1 cut(s)	838
MboI	GATC	3 cut(s)	387, 611, 1339
MfeI	CAATTG	3 cut(s)	1311, 1455, 2345
MhlI	GDGCHC	4 cut(s)	183, 453, 1272, 2079
MlsI	TGGCCA	2 cut(s)	846, 1748
MluNI	TGGCCA	2 cut(s)	846, 1748
MlyI	GAGTC	5 cut(s)	368, 648, 1559, 2312, 2610
MmeI	TCCRAC	2 cut(s)	114, 2331
Mox20I	TGGCCA	2 cut(s)	846, 1748
Mph1103I	ATGCAT	1 cut(s)	1354
MroXI	GAANNNNTTC	2 cut(s)	441, 1059
MscI	TGGCCA	2 cut(s)	846, 1748
MseI	TTAA	8 cut(s)	594, 915, 969, 1050, 1110, 1182, 1355, 1625
MslI	CAYNNNNRTG	2 cut(s)	1347, 1817
Msp20I	TGGCCA	2 cut(s)	846, 1748
MspA1I	CMGCKG	1 cut(s)	2198
MspCI	CTTAAG	2 cut(s)	914, 1049
MspI	CCGG	1 cut(s)	1720
MunI	CAATTG	3 cut(s)	1311, 1455, 2345
MvaI	CCWGG	9 cut(s)	375, 447, 890, 1524, 1745, 1750, 1800, 1859, 2060
NciI	CCSGG	1 cut(s)	1721
NcoI	CCATGG	2 cut(s)	1812, 2114
NdeII	GATC	3 cut(s)	387, 611, 1339
NheI	GCTAGC	1 cut(s)	1162
NlaIV	GGNNCC	2 cut(s)	687, 1487
NmuCI	GTSAC	1 cut(s)	2096
NsiI	ATGCAT	1 cut(s)	1354
NspI	RCATGY	3 cut(s)	27, 1637, 2566
PagI	TCATGA	1 cut(s)	1345
PceI	AGGCCT	1 cut(s)	536
PciSI	GCTCTTC	1 cut(s)	1260
PdmI	GAANNNNTTC	2 cut(s)	441, 1059
PflFI	GACNNNGTC	1 cut(s)	638
PfoI	TCCNGGA	2 cut(s)	1719, 2058
PkrI	GCNGC	9 cut(s)	207, 238, 801, 1047, 1563, 1582, 2197, 2320, 2464
PleI	GAGTC	5 cut(s)	367, 647, 1558, 2311, 2610
PmaCI	CACGTG	1 cut(s)	850
PmlI	CACGTG	1 cut(s)	850
PpsI	GAGTC	5 cut(s)	367, 647, 1558, 2311, 2610
Ppu21I	YACGTR	1 cut(s)	850
PshAI	GACNNNNGTC	1 cut(s)	684
PshBI	ATTAAT	1 cut(s)	1355
PsiI	TTATAA	1 cut(s)	1836
Psp124BI	GAGCTC	2 cut(s)	183, 2079
Psp6I	CCWGG	9 cut(s)	373, 445, 888, 1522, 1743, 1748, 1798, 1857, 2058
PspCI	CACGTG	1 cut(s)	850
PspEI	GGTNACC	1 cut(s)	2228
PspFI	CCCAGC	2 cut(s)	490, 1842
PspGI	CCWGG	9 cut(s)	373, 445, 888, 1522, 1743, 1748, 1798, 1857, 2058
PspN4I	GGNNCC	2 cut(s)	687, 1487
PspPI	GGNCC	5 cut(s)	686, 1004, 1486, 2038, 2552
PstNI	CAGNNNCTG	3 cut(s)	1620, 2282, 2450
PsyI	GACNNNGTC	1 cut(s)	638
PvuII	CAGCTG	1 cut(s)	2198
RsaI	GTAC	7 cut(s)	509, 966, 1238, 1507, 1779, 2018, 2161
RsaNI	GTAC	7 cut(s)	508, 965, 1237, 1506, 1778, 2017, 2160
RseI	CAYNNNNRTG	2 cut(s)	1347, 1817
SacI	GAGCTC	2 cut(s)	183, 2079
SapI	GCTCTTC	1 cut(s)	1260
SaqAI	TTAA	8 cut(s)	594, 915, 969, 1050, 1110, 1182, 1355, 1625
SatI	GCNGC	9 cut(s)	206, 237, 800, 1046, 1562, 1581, 2196, 2319, 2463
Sau3AI	GATC	3 cut(s)	387, 611, 1339
Sau96I	GGNCC	5 cut(s)	686, 1004, 1486, 2038, 2552
SchI	GAGTC	5 cut(s)	368, 648, 1559, 2312, 2610
SduI	GDGCHC	4 cut(s)	183, 453, 1272, 2079
SfaNI	GCATC	7 cut(s)	1041, 1339, 1551, 1717, 2023, 2118, 2437
SfcI	CTRYAG	1 cut(s)	2556
SinI	GGWCC	4 cut(s)	686, 1004, 1486, 2038
SmiMI	CAYNNNNRTG	2 cut(s)	1347, 1817
SmlI	CTYRAG	7 cut(s)	419, 914, 1013, 1049, 1085, 1781, 2300
SmoI	CTYRAG	7 cut(s)	419, 914, 1013, 1049, 1085, 1781, 2300
SseBI	AGGCCT	1 cut(s)	536
SsiI	CCGC	8 cut(s)	700, 800, 838, 1192, 1712, 2036, 2080, 2242
SspI	AATATT	2 cut(s)	519, 900
SspMI	CTAG	7 cut(s)	330, 812, 1163, 1223, 1901, 1967, 2459
SstI	GAGCTC	2 cut(s)	183, 2079
StuI	AGGCCT	1 cut(s)	536
StyI	CCWWGG	6 cut(s)	345, 1037, 1812, 2041, 2114, 2359
TaaI	ACNGT	9 cut(s)	455, 1253, 1300, 1510, 1674, 1792, 2096, 2251, 2642
TaiI	ACGT	4 cut(s)	444, 825, 852, 1400
TaqI	TCGA	7 cut(s)	254, 719, 757, 1256, 1545, 1804, 2499
TaqII	GACCGA	2 cut(s)	148, 1053
TatI	WGTACW	4 cut(s)	507, 964, 1505, 2016
TauI	GCSGC	1 cut(s)	802
Tru1I	TTAA	8 cut(s)	594, 915, 969, 1050, 1110, 1182, 1355, 1625
Tru9I	TTAA	8 cut(s)	594, 915, 969, 1050, 1110, 1182, 1355, 1625
TscAI	CASTG	5 cut(s)	220, 1625, 2287, 2626, 2647
TseFI	GTSAC	1 cut(s)	2096
TseI	GCWGC	8 cut(s)	205, 236, 1045, 1561, 1580, 2195, 2318, 2462
Tsp45I	GTSAC	1 cut(s)	2096
TspGWI	ACGGA	1 cut(s)	996
TspRI	CASTG	5 cut(s)	220, 1625, 2287, 2626, 2647
Tth111I	GACNNNGTC	1 cut(s)	638
Vha464I	CTTAAG	2 cut(s)	914, 1049
VpaK11BI	GGWCC	4 cut(s)	686, 1004, 1486, 2038
VspI	ATTAAT	1 cut(s)	1355
XagI	CCTNNNNNAGG	1 cut(s)	2274
XapI	RAATTY	1 cut(s)	2631
XbaI	TCTAGA	2 cut(s)	811, 1900
XceI	RCATGY	3 cut(s)	27, 1637, 2566
XmiI	GTMKAC	2 cut(s)	10, 2559
XmnI	GAANNNNTTC	2 cut(s)	441, 1059
XspI	CTAG	7 cut(s)	330, 812, 1163, 1223, 1901, 1967, 2459
Zsp2I	ATGCAT	1 cut(s)	1354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.