pycom17g09900

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
7562100 .. 7563482
1383 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g09900.2

Sequence Viewer

Length: 969 bp
ATGGAGAACTTCCCAGTTATCAACTTGGAAAGCCTCAATGGTGAGGGAAGAAAAGCTACAATGGAGAAAATCAAAGATGCCTGTGAGAACTGGGGTTTCTTTGAGCTGGTGAGTCATGGGATTCCAACTGAGTTTTTGGACACAGTGGAGAGGCTGACAAAAGAGCACTACCGGCAGTGTTTGGAGCAAAAGTTCAAGGAGTTGGTGGCCAGCAAAGGCCTTGAGGCCGTTCAGACAGAAGTTAACGATATGGATTGGGAAAGCACTTTCTACTTGCGCCATCTTCCTCAATCCAACATCTCTCAGGTCCCAGATCTGAATGATGAGTACAGGAATGTGATGAAGGAGTTTGCATTGAAACTGGAGAAATTAGCAGAGCAGCTGCTGGACTTGTTGTGTGAGAATCTTGGACTGGAACAAGGGTACCTTAAGAAGGCATTTTATGGAACAAATGGACCAACTTTTGGCACGAAGGTTAGCAACTACCCTCCATGTCCCAACAATGACAAGATCAAGGGTCTCCGGGCCCACACCGATGCCGGCGGCCTCATCTTGCTCTTCCAGGATGACAAGGTCAGTGGCCTCCAGCTCCTCAAGGACGGAGAGTGGGTTGATGTGCCTCCCATGCGCCACTCCCTTGTTATCAACCTTGGTGACCAACTTGAGGTGATCACCAATGGAAAATACAAGAGTGTGGAGCACAGAGTGATTGCCCAAACAGATGGAACCAGAATGTCAATAGCTTCATTCTACAACCCAAGCAGTGATGCAGTGATCTATCCAGCACCAACCCTAGTGGAGAAAAACGCAGAGGAGAAGAATCAAGTGTACCCGAAATTCGTGTTCGAAGACTACATGAAGCACTATGTTGGTGTCAAGTTCCAGGCCAAGGAACCCAGATTTGAAGCTATGAAAGCAGTGGAAGTTCAGACCAGTTTTGGTTTGGGTCCAGTTAAAACTACTGCTTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

323

Amino Acids

36.53

Weight (kDa)

5.33

Isoelectric Point (pI)

29.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015010)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05010
fragaria_vesca FvH4_6g42090
malus_domestica MD09G1114800.v1.1 MD17G1106300.v1.1
prunus_persica Prupe.3G209900_v2.0.a1
pyrus_communis pycom17g09900 pycom17g09920
rosa_chinensis RchiOBHm_Chr2g0158011
rosa_laevigata RLG00000021048
rosa_multiflora Rmu_sc0000419.1_g000014
rosa_roxburghii Rroxscaffold_2G00091750
rosa_rugosa Rorug02G0465200
rosa_samantha Rh2AG531100 Rh2CG515400 Rh2DG553700
rosa_wichuraiana Rw2G043920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 423
AccB1I GGYRCC 1 cut(s) 423
AccB7I CCANNNNNTGG 1 cut(s) 464
AciI CCGC 1 cut(s) 543
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 1 cut(s) 836
AdeI CACNNNGTG 1 cut(s) 706
AfaI GTAC 3 cut(s) 329, 425, 830
AfiI CCNNNNNNNGG 4 cut(s) 433, 464, 664, 889
AflII CTTAAG 1 cut(s) 428
AgsI TTSAA 3 cut(s) 196, 358, 905
AjnI CCWGG 2 cut(s) 561, 882
AloI GAACNNNNNNTCC 2 cut(s) 176, 208
AluBI AGCT 6 cut(s) 56, 106, 382, 589, 743, 908
AluI AGCT 6 cut(s) 56, 106, 382, 589, 743, 908
Alw21I GWGCWC 2 cut(s) 168, 702
Alw26I GTCTC 1 cut(s) 524
AlwNI CAGNNNCTG 1 cut(s) 385
AoxI GGCC 7 cut(s) 207, 217, 225, 525, 544, 580, 885
ApaI GGGCCC 1 cut(s) 529
ApeKI GCWGC 2 cut(s) 379, 382
ApoI RAATTY 1 cut(s) 836
Asp718I GGTACC 1 cut(s) 423
AspLEI GCGC 2 cut(s) 279, 630
AspS9I GGNCC 5 cut(s) 307, 455, 525, 526, 947
AsuC2I CCSGG 1 cut(s) 524
AsuHPI GGTGA 5 cut(s) 53, 121, 664, 665, 679
AsuII TTCGAA 1 cut(s) 846
AvaII GGWCC 3 cut(s) 307, 455, 947
BaeGI GKGCMC 1 cut(s) 529
BaeI ACNNNNGTAYC 2 cut(s) 407, 440
BalI TGGCCA 1 cut(s) 209
BanI GGYRCC 1 cut(s) 423
BanII GRGCYC 1 cut(s) 529
BarI GAAGNNNNNNTAC 2 cut(s) 40, 72
BbsI GAAGAC 1 cut(s) 855
Bbv12I GWGCWC 2 cut(s) 168, 702
BbvI GCAGC 2 cut(s) 369, 391
BccI CCATC 2 cut(s) 288, 716
BceAI ACGGC 1 cut(s) 212
BciT130I CCWGG 2 cut(s) 563, 884
BclI TGATCA 1 cut(s) 669
BcnI CCSGG 1 cut(s) 524
BcoDI GTCTC 1 cut(s) 524
BfaI CTAG 1 cut(s) 794
BfrI CTTAAG 1 cut(s) 428
BglII AGATCT 1 cut(s) 313
BisI GCNGC 3 cut(s) 380, 383, 544
BlsI GCNGC 3 cut(s) 381, 384, 545
Bme1390I CCNGG 3 cut(s) 524, 563, 884
Bme18I GGWCC 3 cut(s) 307, 455, 947
BmgT120I GGNCC 5 cut(s) 307, 455, 525, 526, 947
BmiI GGNNCC 6 cut(s) 309, 425, 527, 727, 894, 948
BmrFI CCNGG 3 cut(s) 524, 563, 884
BmrI ACTGGG 2 cut(s) 8, 100
BmsI GCATC 3 cut(s) 67, 526, 757
BmuI ACTGGG 2 cut(s) 8, 100
BpiI GAAGAC 1 cut(s) 855
BpmI CTGGAG 2 cut(s) 383, 569
Bpu14I TTCGAA 1 cut(s) 846
BpuEI CTTGAG 3 cut(s) 242, 578, 683
BpuMI CCSGG 1 cut(s) 524
BsaI GGTCTC 1 cut(s) 524
BsaJI CCNNGG 2 cut(s) 649, 888
BsaXI ACNNNNNCTCC 4 cut(s) 176, 206, 594, 624
Bsc4I CCNNNNNNNGG 4 cut(s) 433, 464, 664, 889
Bse118I RCCGGY 2 cut(s) 171, 539
Bse1I ACTGG 6 cut(s) 14, 95, 366, 417, 933, 950
BseBI CCWGG 2 cut(s) 563, 884
BseDI CCNNGG 2 cut(s) 649, 888
BseGI GGATG 1 cut(s) 571
BseLI CCNNNNNNNGG 4 cut(s) 433, 464, 664, 889
BseMII CTCAG 2 cut(s) 120, 317
BseNI ACTGG 6 cut(s) 14, 95, 366, 417, 933, 950
BseRI GAGGAG 2 cut(s) 581, 827
BseSI GKGCMC 1 cut(s) 529
BseXI GCAGC 2 cut(s) 369, 391
BshFI GGCC 7 cut(s) 209, 219, 227, 527, 546, 582, 887
BshNI GGYRCC 1 cut(s) 423
BsiHKAI GWGCWC 2 cut(s) 168, 702
BsiSI CCGG 3 cut(s) 172, 523, 540
BslFI GGGAC 2 cut(s) 293, 480
BslI CCNNNNNNNGG 4 cut(s) 433, 464, 664, 889
BsmAI GTCTC 1 cut(s) 524
BsmFI GGGAC 2 cut(s) 293, 480
BsnI GGCC 7 cut(s) 209, 219, 227, 527, 546, 582, 887
Bso31I GGTCTC 1 cut(s) 524
Bsp119I TTCGAA 1 cut(s) 846
Bsp120I GGGCCC 1 cut(s) 525
Bsp1286I GDGCHC 3 cut(s) 168, 529, 702
Bsp143I GATC 4 cut(s) 313, 510, 669, 774
BspACI CCGC 1 cut(s) 543
BspANI GGCC 7 cut(s) 209, 219, 227, 527, 546, 582, 887
BspCNI CTCAG 2 cut(s) 121, 316
BspLI GGNNCC 6 cut(s) 309, 425, 527, 727, 894, 948
BspQI GCTCTTC 1 cut(s) 563
BspT104I TTCGAA 1 cut(s) 846
BspT107I GGYRCC 1 cut(s) 423
BspTI CTTAAG 1 cut(s) 428
BspTNI GGTCTC 1 cut(s) 524
BsrFI RCCGGY 2 cut(s) 171, 539
BsrI ACTGG 6 cut(s) 14, 95, 366, 417, 933, 950
BssAI RCCGGY 2 cut(s) 171, 539
BssECI CCNNGG 2 cut(s) 649, 888
BssMI GATC 4 cut(s) 313, 510, 669, 774
BssT1I CCWWGG 2 cut(s) 649, 888
Bst2UI CCWGG 2 cut(s) 563, 884
Bst4CI ACNGT 1 cut(s) 145
Bst6I CTCTTC 1 cut(s) 563
BstAFI CTTAAG 1 cut(s) 428
BstBI TTCGAA 1 cut(s) 846
BstC8I GCNNGC 2 cut(s) 211, 541
BstDEI CTNAG 2 cut(s) 129, 303
BstEII GGTNACC 1 cut(s) 653
BstENI CCTNNNNNAGG 1 cut(s) 431
BstF5I GGATG 1 cut(s) 571
BstHHI GCGC 2 cut(s) 279, 630
BstKTI GATC 4 cut(s) 316, 513, 672, 777
BstMAI GTCTC 1 cut(s) 524
BstMBI GATC 4 cut(s) 313, 510, 669, 774
BstMWI GCNNNNNNNGC 3 cut(s) 172, 625, 914
BstNI CCWGG 2 cut(s) 563, 884
BstPI GGTNACC 1 cut(s) 653
BstSCI CCNGG 3 cut(s) 522, 561, 882
BstSLI GKGCMC 1 cut(s) 529
BstV1I GCAGC 2 cut(s) 369, 391
BstV2I GAAGAC 1 cut(s) 855
BstX2I RGATCY 1 cut(s) 313
BstXI CCANNNNNNTGG 1 cut(s) 722
BstYI RGATCY 1 cut(s) 313
BsuRI GGCC 7 cut(s) 209, 219, 227, 527, 546, 582, 887
BtsCI GGATG 1 cut(s) 571
BtsI GCAGTG 4 cut(s) 182, 769, 777, 924
BtsIMutI CAGTG 6 cut(s) 150, 182, 583, 769, 777, 924
Cac8I GCNNGC 2 cut(s) 211, 541
CaiI CAGNNNCTG 1 cut(s) 385
CfoI GCGC 2 cut(s) 279, 630
Cfr10I RCCGGY 2 cut(s) 171, 539
Cfr13I GGNCC 5 cut(s) 307, 455, 525, 526, 947
Csp6I GTAC 3 cut(s) 328, 424, 829
CspCI CAANNNNNGTGG 4 cut(s) 559, 594, 777, 812
CviAII CATG 4 cut(s) 116, 492, 625, 856
CviQI GTAC 3 cut(s) 328, 424, 829
DdeI CTNAG 2 cut(s) 129, 303
DpnI GATC 4 cut(s) 315, 512, 671, 776
DpnII GATC 4 cut(s) 313, 510, 669, 774
DraIII CACNNNGTG 1 cut(s) 706
EaeI YGGCCR 1 cut(s) 207
Eam1104I CTCTTC 1 cut(s) 563
EarI CTCTTC 1 cut(s) 563
Eco130I CCWWGG 2 cut(s) 649, 888
Eco147I AGGCCT 1 cut(s) 219
Eco24I GRGCYC 1 cut(s) 529
Eco31I GGTCTC 1 cut(s) 524
Eco47I GGWCC 3 cut(s) 307, 455, 947
Eco91I GGTNACC 1 cut(s) 653
EcoNI CCTNNNNNAGG 1 cut(s) 431
EcoO109I RGGNCCY 1 cut(s) 307
EcoO65I GGTNACC 1 cut(s) 653
EcoRII CCWGG 2 cut(s) 561, 882
EcoT14I CCWWGG 2 cut(s) 649, 888
EcoT38I GRGCYC 1 cut(s) 529
ErhI CCWWGG 2 cut(s) 649, 888
FaeI CATG 4 cut(s) 119, 495, 628, 859
FaiI YATR 8 cut(s) 117, 251, 444, 493, 626, 857, 867, 911
FalI AAGNNNNNCTT 2 cut(s) 411, 443
FaqI GGGAC 2 cut(s) 293, 480
FatI CATG 4 cut(s) 115, 491, 624, 855
FbaI TGATCA 1 cut(s) 669
Fnu4HI GCNGC 3 cut(s) 380, 383, 544
FokI GGATG 1 cut(s) 578
FriOI GRGCYC 1 cut(s) 529
Fsp4HI GCNGC 3 cut(s) 380, 383, 544
FspBI CTAG 1 cut(s) 794
GlaI GCGC 2 cut(s) 278, 629
GluI GCNGC 3 cut(s) 380, 383, 544
GsuI CTGGAG 2 cut(s) 383, 569
HaeIII GGCC 7 cut(s) 209, 219, 227, 527, 546, 582, 887
HapII CCGG 3 cut(s) 172, 523, 540
HhaI GCGC 2 cut(s) 279, 630
Hin1II CATG 4 cut(s) 119, 495, 628, 859
Hin6I GCGC 2 cut(s) 277, 628
HinP1I GCGC 2 cut(s) 277, 628
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HinfI GANTC 4 cut(s) 112, 121, 403, 820
HpaI GTTAAC 1 cut(s) 244
HpaII CCGG 3 cut(s) 172, 523, 540
HphI GGTGA 5 cut(s) 53, 121, 664, 665, 679
Hpy166II GTNNAC 2 cut(s) 244, 829
Hpy188I TCNGA 3 cut(s) 234, 318, 930
Hpy8I GTNNAC 2 cut(s) 244, 829
HpyAV CCTTC 3 cut(s) 337, 427, 466
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4V TGCA 2 cut(s) 353, 770
HpyF10VI GCNNNNNNNGC 3 cut(s) 172, 625, 914
HpyF3I CTNAG 2 cut(s) 129, 303
Hsp92II CATG 4 cut(s) 119, 495, 628, 859
HspAI GCGC 2 cut(s) 277, 628
KpnI GGTACC 1 cut(s) 427
KroI GCCGGC 1 cut(s) 539
KroNI GCCGGC 1 cut(s) 541
Ksp22I TGATCA 1 cut(s) 669
KspAI GTTAAC 1 cut(s) 244
Kzo9I GATC 4 cut(s) 313, 510, 669, 774
LguI GCTCTTC 1 cut(s) 563
LmnI GCTCC 3 cut(s) 184, 594, 697
Lsp1109I GCAGC 2 cut(s) 369, 391
LweI GCATC 3 cut(s) 67, 526, 757
MaeI CTAG 1 cut(s) 794
MaeIII GTNAC 1 cut(s) 653
MalI GATC 4 cut(s) 315, 512, 671, 776
MboI GATC 4 cut(s) 313, 510, 669, 774
MboII GAAGA 5 cut(s) 60, 275, 550, 829, 860
MflI RGATCY 1 cut(s) 313
MhlI GDGCHC 3 cut(s) 168, 529, 702
MlsI TGGCCA 1 cut(s) 209
MluCI AATT 2 cut(s) 368, 836
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 1 cut(s) 121
MmeI TCCRAC 2 cut(s) 149, 318
Mox20I TGGCCA 1 cut(s) 209
MroNI GCCGGC 1 cut(s) 539
MscI TGGCCA 1 cut(s) 209
MseI TTAA 3 cut(s) 243, 429, 954
MslI CAYNNNNRTG 1 cut(s) 534
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 1 cut(s) 382
MspCI CTTAAG 1 cut(s) 428
MspI CCGG 3 cut(s) 172, 523, 540
MspR9I CCNGG 3 cut(s) 524, 563, 884
MvaI CCWGG 2 cut(s) 563, 884
MwoI GCNNNNNNNGC 3 cut(s) 172, 625, 914
NaeI GCCGGC 1 cut(s) 541
NciI CCSGG 1 cut(s) 524
NdeII GATC 4 cut(s) 313, 510, 669, 774
NgoMIV GCCGGC 1 cut(s) 539
NlaIII CATG 4 cut(s) 119, 495, 628, 859
NlaIV GGNNCC 6 cut(s) 309, 425, 527, 727, 894, 948
NmuCI GTSAC 1 cut(s) 653
NspV TTCGAA 1 cut(s) 846
PceI AGGCCT 1 cut(s) 219
PciSI GCTCTTC 1 cut(s) 563
PdiI GCCGGC 1 cut(s) 541
PfeI GAWTC 3 cut(s) 121, 403, 820
PflFI GACNNNGTC 1 cut(s) 572
PflMI CCANNNNNTGG 1 cut(s) 464
PfoI TCCNGGA 1 cut(s) 561
PkrI GCNGC 3 cut(s) 381, 384, 545
PleI GAGTC 1 cut(s) 120
PpsI GAGTC 1 cut(s) 120
PpuMI RGGWCCY 1 cut(s) 307
Psp5II RGGWCCY 1 cut(s) 307
Psp6I CCWGG 2 cut(s) 561, 882
PspEI GGTNACC 1 cut(s) 653
PspGI CCWGG 2 cut(s) 561, 882
PspN4I GGNNCC 6 cut(s) 309, 425, 527, 727, 894, 948
PspOMI GGGCCC 1 cut(s) 525
PspPI GGNCC 5 cut(s) 307, 455, 525, 526, 947
PspPPI RGGWCCY 1 cut(s) 307
PstNI CAGNNNCTG 1 cut(s) 385
PsuI RGATCY 1 cut(s) 313
PsyI GACNNNGTC 1 cut(s) 572
PvuII CAGCTG 1 cut(s) 382
RsaI GTAC 3 cut(s) 329, 425, 830
RsaNI GTAC 3 cut(s) 328, 424, 829
RseI CAYNNNNRTG 1 cut(s) 534
SapI GCTCTTC 1 cut(s) 563
SaqAI TTAA 3 cut(s) 243, 429, 954
SatI GCNGC 3 cut(s) 380, 383, 544
Sau3AI GATC 4 cut(s) 313, 510, 669, 774
Sau96I GGNCC 5 cut(s) 307, 455, 525, 526, 947
SchI GAGTC 1 cut(s) 121
ScrFI CCNGG 3 cut(s) 524, 563, 884
SduI GDGCHC 3 cut(s) 168, 529, 702
SfaNI GCATC 3 cut(s) 67, 526, 757
SfuI TTCGAA 1 cut(s) 846
SinI GGWCC 3 cut(s) 307, 455, 947
SmiMI CAYNNNNRTG 1 cut(s) 534
SmlI CTYRAG 4 cut(s) 221, 428, 593, 662
SmoI CTYRAG 4 cut(s) 221, 428, 593, 662
Sse9I AATT 2 cut(s) 368, 836
SseBI AGGCCT 1 cut(s) 219
SsiI CCGC 1 cut(s) 543
SspMI CTAG 1 cut(s) 794
StuI AGGCCT 1 cut(s) 219
StyD4I CCNGG 3 cut(s) 522, 561, 882
StyI CCWWGG 2 cut(s) 649, 888
TaaI ACNGT 1 cut(s) 145
TaqI TCGA 1 cut(s) 846
TasI AATT 2 cut(s) 368, 836
TatI WGTACW 1 cut(s) 327
TauI GCSGC 1 cut(s) 546
TfiI GAWTC 3 cut(s) 121, 403, 820
Tru1I TTAA 3 cut(s) 243, 429, 954
Tru9I TTAA 3 cut(s) 243, 429, 954
TscAI CASTG 6 cut(s) 150, 182, 583, 769, 777, 924
TseFI GTSAC 1 cut(s) 653
TseI GCWGC 2 cut(s) 379, 382
Tsp45I GTSAC 1 cut(s) 653
TspDTI ATGAA 4 cut(s) 356, 735, 872, 926
TspGWI ACGGA 1 cut(s) 615
TspRI CASTG 6 cut(s) 150, 182, 583, 769, 777, 924
Tth111I GACNNNGTC 1 cut(s) 572
Van91I CCANNNNNTGG 1 cut(s) 464
Vha464I CTTAAG 1 cut(s) 428
VpaK11BI GGWCC 3 cut(s) 307, 455, 947
XagI CCTNNNNNAGG 1 cut(s) 431
XapI RAATTY 1 cut(s) 836
XcmI CCANNNNNNNNNTGG 1 cut(s) 940
XspI CTAG 1 cut(s) 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.