pycom17g09920

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
7583785 .. 7585510
1726 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1116 bp
ATGATTTTAGCCCGTGATTGGTCCAAACAAAGATGGTGGGCGCGCACACACCAAACTCCGCTCCACAAGAACAAATTAACCAAACACTTGTCGAGAGAGAGAGAGAGAAAGAGAGAGAGAGATAGTTTAGAGAGAGAAAATAGAGAAATGGAGAACTTCCCAGTTATCAACTTGGAGAGCCTCAATGGTGAGGGAAGAAAAGCTACAATGGAGAAAATCAAAGATGCCTGTGAGAACTGGGGTTTCTTTGAGCTGGTGAGTCATGGGATTCCAACTGAGTTTTTGGACACAGTGGAGAGGCTGACAAAAGAGCACTACCGGCAGTGTTTGGAGCAAAAGTTCAAGGAGTTGGTGGCCAGCAAAGGCCTTGAGGCCGTTCAGACAGAAGTCAACGATATGGATTGGGAAAGCACTTTCTACTTGCGCCATCTTCCTCAATCCAACATCTCTCAGGTCCCAGATCTCAAGGATGAGTACAGGAATGTGATGAAGGAGTTTGCATTGAAACTGGAGAAATTAGCAGAGCAGCTGCTGGACTTGTTGTGTGAGAATCTTGGACTGGAACAAGGGTACCTTAAGAAGGCATTTTATGGAACAAATGGACCAACTTTTGGCACCAAGGTTAGCAACTACCCTCCATGTCCCAACAATGACAAGATCAAGGGTCTCCGGGCCCACACCGATGCCGGCGGCCTCATCTTGCTCTTCCAGGATGACAAGGTCAGTGGCCTCCAGCTCCTCAAGGACGGAGAGTGGGTTGATGTGCCTCCCATGCGCCACTCCCTTGTTATCAACCTTGGTGACCAACTTGAGGTGATCACCAATGGAAAATACAAGAGTGTGGAGCACAGAGTGATTGCCCAAACAGATGGAACCAGAATGTCAATAGCTTCATTCTACAACCCAAGCAGTGATGCAGTGATCTATCCAGCACCAACCCTAGTGGAGAAAAACGCAGAGGAGAAGAATCAAGTGTACCCGAAATTCGTGTTCGAAGACTACATGAAGCACTATGTTGGTGTCAAGTTCCAGGCCAAGGAACCCAGATTTGAAGCTATGAAAGCAGTGGAAGTTCAGACCAGTTTTGGTTTGGGTCCAGTTAAAACTACTGCTTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

372

Amino Acids

42.82

Weight (kDa)

6.58

Isoelectric Point (pI)

31.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 54 - 147 1.5e-15 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 208 - 302 2.2e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015010)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05010
fragaria_vesca FvH4_6g42090
malus_domestica MD09G1114800.v1.1 MD17G1106300.v1.1
prunus_persica Prupe.3G209900_v2.0.a1
pyrus_communis pycom17g09900 pycom17g09920
rosa_chinensis RchiOBHm_Chr2g0158011
rosa_laevigata RLG00000021048
rosa_multiflora Rmu_sc0000419.1_g000014
rosa_roxburghii Rroxscaffold_2G00091750
rosa_rugosa Rorug02G0465200
rosa_samantha Rh2AG531100 Rh2CG515400 Rh2DG553700
rosa_wichuraiana Rw2G043920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 570
AccB1I GGYRCC 2 cut(s) 570, 614
AccB7I CCANNNNNTGG 1 cut(s) 611
AccBSI CCGCTC 1 cut(s) 61
AccII CGCG 1 cut(s) 43
AciI CCGC 2 cut(s) 59, 690
AcoI YGGCCR 1 cut(s) 354
AcsI RAATTY 1 cut(s) 983
AdeI CACNNNGTG 1 cut(s) 853
AfaI GTAC 3 cut(s) 476, 572, 977
AfiI CCNNNNNNNGG 5 cut(s) 18, 580, 611, 811, 1036
AflII CTTAAG 1 cut(s) 575
AgsI TTSAA 3 cut(s) 343, 505, 1052
AjnI CCWGG 2 cut(s) 708, 1029
AloI GAACNNNNNNTCC 2 cut(s) 323, 355
AluBI AGCT 6 cut(s) 203, 253, 529, 736, 890, 1055
AluI AGCT 6 cut(s) 203, 253, 529, 736, 890, 1055
Alw21I GWGCWC 2 cut(s) 315, 849
Alw26I GTCTC 1 cut(s) 671
AlwNI CAGNNNCTG 1 cut(s) 532
AoxI GGCC 7 cut(s) 354, 364, 372, 672, 691, 727, 1032
ApaI GGGCCC 1 cut(s) 676
ApeKI GCWGC 2 cut(s) 526, 529
ApoI RAATTY 1 cut(s) 983
Asp718I GGTACC 1 cut(s) 570
AspLEI GCGC 4 cut(s) 43, 45, 426, 777
AspS9I GGNCC 6 cut(s) 21, 454, 602, 672, 673, 1094
AsuC2I CCSGG 1 cut(s) 671
AsuHPI GGTGA 5 cut(s) 200, 268, 811, 812, 826
AsuII TTCGAA 1 cut(s) 993
AvaII GGWCC 4 cut(s) 21, 454, 602, 1094
BaeGI GKGCMC 1 cut(s) 676
BaeI ACNNNNGTAYC 2 cut(s) 554, 587
BalI TGGCCA 1 cut(s) 356
BanI GGYRCC 2 cut(s) 570, 614
BanII GRGCYC 1 cut(s) 676
BarI GAAGNNNNNNTAC 2 cut(s) 187, 219
BbsI GAAGAC 1 cut(s) 1002
Bbv12I GWGCWC 2 cut(s) 315, 849
BbvI GCAGC 2 cut(s) 516, 538
BccI CCATC 3 cut(s) 27, 435, 863
BceAI ACGGC 1 cut(s) 359
BciT130I CCWGG 2 cut(s) 710, 1031
BclI TGATCA 1 cut(s) 816
BcnI CCSGG 1 cut(s) 671
BcoDI GTCTC 1 cut(s) 671
BfaI CTAG 1 cut(s) 941
BfrI CTTAAG 1 cut(s) 575
BglII AGATCT 1 cut(s) 460
BisI GCNGC 3 cut(s) 527, 530, 691
BlsI GCNGC 3 cut(s) 528, 531, 692
Bme1390I CCNGG 3 cut(s) 671, 710, 1031
Bme18I GGWCC 4 cut(s) 21, 454, 602, 1094
BmgT120I GGNCC 6 cut(s) 21, 454, 602, 672, 673, 1094
BmiI GGNNCC 7 cut(s) 456, 572, 616, 674, 874, 1041, 1095
BmrFI CCNGG 3 cut(s) 671, 710, 1031
BmrI ACTGGG 2 cut(s) 155, 247
BmsI GCATC 3 cut(s) 214, 673, 904
BmuI ACTGGG 2 cut(s) 155, 247
BoxI GACNNNNGTC 1 cut(s) 386
BpiI GAAGAC 1 cut(s) 1002
BpmI CTGGAG 2 cut(s) 530, 716
Bpu14I TTCGAA 1 cut(s) 993
BpuEI CTTGAG 4 cut(s) 389, 449, 725, 830
BpuMI CCSGG 1 cut(s) 671
BsaI GGTCTC 1 cut(s) 671
BsaJI CCNNGG 3 cut(s) 618, 796, 1035
BsaXI ACNNNNNCTCC 4 cut(s) 323, 353, 741, 771
Bsc4I CCNNNNNNNGG 5 cut(s) 18, 580, 611, 811, 1036
Bse118I RCCGGY 2 cut(s) 318, 686
Bse1I ACTGG 6 cut(s) 161, 242, 513, 564, 1080, 1097
BseBI CCWGG 2 cut(s) 710, 1031
BseDI CCNNGG 3 cut(s) 618, 796, 1035
BseGI GGATG 2 cut(s) 475, 718
BseLI CCNNNNNNNGG 5 cut(s) 18, 580, 611, 811, 1036
BseMII CTCAG 2 cut(s) 267, 464
BseNI ACTGG 6 cut(s) 161, 242, 513, 564, 1080, 1097
BsePI GCGCGC 1 cut(s) 41
BseRI GAGGAG 2 cut(s) 728, 974
BseSI GKGCMC 1 cut(s) 676
BseXI GCAGC 2 cut(s) 516, 538
Bsh1236I CGCG 1 cut(s) 43
BshFI GGCC 7 cut(s) 356, 366, 374, 674, 693, 729, 1034
BshNI GGYRCC 2 cut(s) 570, 614
BsiHKAI GWGCWC 2 cut(s) 315, 849
BsiSI CCGG 3 cut(s) 319, 670, 687
BslFI GGGAC 2 cut(s) 440, 627
BslI CCNNNNNNNGG 5 cut(s) 18, 580, 611, 811, 1036
BsmAI GTCTC 1 cut(s) 671
BsmFI GGGAC 2 cut(s) 440, 627
BsnI GGCC 7 cut(s) 356, 366, 374, 674, 693, 729, 1034
Bso31I GGTCTC 1 cut(s) 671
Bsp119I TTCGAA 1 cut(s) 993
Bsp120I GGGCCC 1 cut(s) 672
Bsp1286I GDGCHC 3 cut(s) 315, 676, 849
Bsp143I GATC 4 cut(s) 460, 657, 816, 921
BspACI CCGC 2 cut(s) 59, 690
BspANI GGCC 7 cut(s) 356, 366, 374, 674, 693, 729, 1034
BspCNI CTCAG 2 cut(s) 268, 463
BspFNI CGCG 1 cut(s) 43
BspLI GGNNCC 7 cut(s) 456, 572, 616, 674, 874, 1041, 1095
BspQI GCTCTTC 1 cut(s) 710
BspT104I TTCGAA 1 cut(s) 993
BspT107I GGYRCC 2 cut(s) 570, 614
BspTI CTTAAG 1 cut(s) 575
BspTNI GGTCTC 1 cut(s) 671
BsrBI CCGCTC 1 cut(s) 61
BsrFI RCCGGY 2 cut(s) 318, 686
BsrI ACTGG 6 cut(s) 161, 242, 513, 564, 1080, 1097
BssAI RCCGGY 2 cut(s) 318, 686
BssECI CCNNGG 3 cut(s) 618, 796, 1035
BssHII GCGCGC 1 cut(s) 41
BssMI GATC 4 cut(s) 460, 657, 816, 921
BssT1I CCWWGG 3 cut(s) 618, 796, 1035
Bst2UI CCWGG 2 cut(s) 710, 1031
Bst4CI ACNGT 1 cut(s) 292
Bst6I CTCTTC 1 cut(s) 710
BstAFI CTTAAG 1 cut(s) 575
BstBI TTCGAA 1 cut(s) 993
BstC8I GCNNGC 3 cut(s) 43, 358, 688
BstDEI CTNAG 2 cut(s) 276, 450
BstEII GGTNACC 1 cut(s) 800
BstENI CCTNNNNNAGG 1 cut(s) 578
BstF5I GGATG 2 cut(s) 475, 718
BstFNI CGCG 1 cut(s) 43
BstHHI GCGC 4 cut(s) 43, 45, 426, 777
BstKTI GATC 4 cut(s) 463, 660, 819, 924
BstMAI GTCTC 1 cut(s) 671
BstMBI GATC 4 cut(s) 460, 657, 816, 921
BstMWI GCNNNNNNNGC 3 cut(s) 319, 772, 1061
BstNI CCWGG 2 cut(s) 710, 1031
BstPAI GACNNNNGTC 1 cut(s) 386
BstPI GGTNACC 1 cut(s) 800
BstSCI CCNGG 3 cut(s) 669, 708, 1029
BstSLI GKGCMC 1 cut(s) 676
BstUI CGCG 1 cut(s) 43
BstV1I GCAGC 2 cut(s) 516, 538
BstV2I GAAGAC 1 cut(s) 1002
BstX2I RGATCY 1 cut(s) 460
BstXI CCANNNNNNTGG 1 cut(s) 869
BstYI RGATCY 1 cut(s) 460
BsuRI GGCC 7 cut(s) 356, 366, 374, 674, 693, 729, 1034
BtsCI GGATG 2 cut(s) 475, 718
BtsI GCAGTG 4 cut(s) 329, 916, 924, 1071
BtsIMutI CAGTG 6 cut(s) 297, 329, 730, 916, 924, 1071
Cac8I GCNNGC 3 cut(s) 43, 358, 688
CaiI CAGNNNCTG 1 cut(s) 532
CfoI GCGC 4 cut(s) 43, 45, 426, 777
Cfr10I RCCGGY 2 cut(s) 318, 686
Cfr13I GGNCC 6 cut(s) 21, 454, 602, 672, 673, 1094
Csp6I GTAC 3 cut(s) 475, 571, 976
CspCI CAANNNNNGTGG 6 cut(s) 17, 52, 706, 741, 924, 959
CviAII CATG 4 cut(s) 263, 639, 772, 1003
CviQI GTAC 3 cut(s) 475, 571, 976
DdeI CTNAG 2 cut(s) 276, 450
DpnI GATC 4 cut(s) 462, 659, 818, 923
DpnII GATC 4 cut(s) 460, 657, 816, 921
DraIII CACNNNGTG 1 cut(s) 853
EaeI YGGCCR 1 cut(s) 354
Eam1104I CTCTTC 1 cut(s) 710
EarI CTCTTC 1 cut(s) 710
Eco130I CCWWGG 3 cut(s) 618, 796, 1035
Eco147I AGGCCT 1 cut(s) 366
Eco24I GRGCYC 1 cut(s) 676
Eco31I GGTCTC 1 cut(s) 671
Eco47I GGWCC 4 cut(s) 21, 454, 602, 1094
Eco91I GGTNACC 1 cut(s) 800
EcoNI CCTNNNNNAGG 1 cut(s) 578
EcoO109I RGGNCCY 1 cut(s) 454
EcoO65I GGTNACC 1 cut(s) 800
EcoRII CCWGG 2 cut(s) 708, 1029
EcoT14I CCWWGG 3 cut(s) 618, 796, 1035
EcoT38I GRGCYC 1 cut(s) 676
ErhI CCWWGG 3 cut(s) 618, 796, 1035
FaeI CATG 4 cut(s) 266, 642, 775, 1006
FaiI YATR 8 cut(s) 264, 398, 591, 640, 773, 1004, 1014, 1058
FalI AAGNNNNNCTT 2 cut(s) 558, 590
FaqI GGGAC 2 cut(s) 440, 627
FatI CATG 4 cut(s) 262, 638, 771, 1002
FbaI TGATCA 1 cut(s) 816
Fnu4HI GCNGC 3 cut(s) 527, 530, 691
FokI GGATG 2 cut(s) 482, 725
FriOI GRGCYC 1 cut(s) 676
Fsp4HI GCNGC 3 cut(s) 527, 530, 691
FspBI CTAG 1 cut(s) 941
GlaI GCGC 4 cut(s) 42, 44, 425, 776
GluI GCNGC 3 cut(s) 527, 530, 691
GsuI CTGGAG 2 cut(s) 530, 716
HaeIII GGCC 7 cut(s) 356, 366, 374, 674, 693, 729, 1034
HapII CCGG 3 cut(s) 319, 670, 687
HhaI GCGC 4 cut(s) 43, 45, 426, 777
Hin1II CATG 4 cut(s) 266, 642, 775, 1006
Hin6I GCGC 4 cut(s) 41, 43, 424, 775
HinP1I GCGC 4 cut(s) 41, 43, 424, 775
HincII GTYRAC 1 cut(s) 391
HindII GTYRAC 1 cut(s) 391
HinfI GANTC 4 cut(s) 259, 268, 550, 967
HpaII CCGG 3 cut(s) 319, 670, 687
HphI GGTGA 5 cut(s) 200, 268, 811, 812, 826
Hpy166II GTNNAC 2 cut(s) 391, 976
Hpy188I TCNGA 2 cut(s) 381, 1077
Hpy188III TCNNGA 1 cut(s) 93
Hpy8I GTNNAC 2 cut(s) 391, 976
HpyAV CCTTC 2 cut(s) 484, 574
HpyCH4III ACNGT 1 cut(s) 292
HpyCH4V TGCA 2 cut(s) 500, 917
HpyF10VI GCNNNNNNNGC 3 cut(s) 319, 772, 1061
HpyF3I CTNAG 2 cut(s) 276, 450
Hsp92II CATG 4 cut(s) 266, 642, 775, 1006
HspAI GCGC 4 cut(s) 41, 43, 424, 775
KpnI GGTACC 1 cut(s) 574
KroI GCCGGC 1 cut(s) 686
KroNI GCCGGC 1 cut(s) 688
Ksp22I TGATCA 1 cut(s) 816
Kzo9I GATC 4 cut(s) 460, 657, 816, 921
LguI GCTCTTC 1 cut(s) 710
LmnI GCTCC 4 cut(s) 66, 331, 741, 844
Lsp1109I GCAGC 2 cut(s) 516, 538
LweI GCATC 3 cut(s) 214, 673, 904
MaeI CTAG 1 cut(s) 941
MaeIII GTNAC 1 cut(s) 800
MalI GATC 4 cut(s) 462, 659, 818, 923
MbiI CCGCTC 1 cut(s) 61
MboI GATC 4 cut(s) 460, 657, 816, 921
MboII GAAGA 5 cut(s) 207, 422, 697, 976, 1007
MflI RGATCY 1 cut(s) 460
MhlI GDGCHC 3 cut(s) 315, 676, 849
MlsI TGGCCA 1 cut(s) 356
MluCI AATT 3 cut(s) 74, 515, 983
MluNI TGGCCA 1 cut(s) 356
MlyI GAGTC 1 cut(s) 268
MmeI TCCRAC 2 cut(s) 296, 465
Mox20I TGGCCA 1 cut(s) 356
MroNI GCCGGC 1 cut(s) 686
MscI TGGCCA 1 cut(s) 356
MseI TTAA 3 cut(s) 77, 576, 1101
MslI CAYNNNNRTG 1 cut(s) 681
Msp20I TGGCCA 1 cut(s) 356
MspA1I CMGCKG 1 cut(s) 529
MspCI CTTAAG 1 cut(s) 575
MspI CCGG 3 cut(s) 319, 670, 687
MspR9I CCNGG 3 cut(s) 671, 710, 1031
MvaI CCWGG 2 cut(s) 710, 1031
MvnI CGCG 1 cut(s) 43
MwoI GCNNNNNNNGC 3 cut(s) 319, 772, 1061
NaeI GCCGGC 1 cut(s) 688
NciI CCSGG 1 cut(s) 671
NdeII GATC 4 cut(s) 460, 657, 816, 921
NgoMIV GCCGGC 1 cut(s) 686
NlaIII CATG 4 cut(s) 266, 642, 775, 1006
NlaIV GGNNCC 7 cut(s) 456, 572, 616, 674, 874, 1041, 1095
NmuCI GTSAC 1 cut(s) 800
NspV TTCGAA 1 cut(s) 993
PauI GCGCGC 1 cut(s) 41
PceI AGGCCT 1 cut(s) 366
PciSI GCTCTTC 1 cut(s) 710
PdiI GCCGGC 1 cut(s) 688
PfeI GAWTC 3 cut(s) 268, 550, 967
PflFI GACNNNGTC 1 cut(s) 719
PflMI CCANNNNNTGG 1 cut(s) 611
PfoI TCCNGGA 1 cut(s) 708
PkrI GCNGC 3 cut(s) 528, 531, 692
PleI GAGTC 1 cut(s) 267
PpsI GAGTC 1 cut(s) 267
PpuMI RGGWCCY 1 cut(s) 454
PshAI GACNNNNGTC 1 cut(s) 386
Psp5II RGGWCCY 1 cut(s) 454
Psp6I CCWGG 2 cut(s) 708, 1029
PspEI GGTNACC 1 cut(s) 800
PspGI CCWGG 2 cut(s) 708, 1029
PspN4I GGNNCC 7 cut(s) 456, 572, 616, 674, 874, 1041, 1095
PspOMI GGGCCC 1 cut(s) 672
PspPI GGNCC 6 cut(s) 21, 454, 602, 672, 673, 1094
PspPPI RGGWCCY 1 cut(s) 454
PstNI CAGNNNCTG 1 cut(s) 532
PsuI RGATCY 1 cut(s) 460
PsyI GACNNNGTC 1 cut(s) 719
PteI GCGCGC 1 cut(s) 41
PvuII CAGCTG 1 cut(s) 529
RsaI GTAC 3 cut(s) 476, 572, 977
RsaNI GTAC 3 cut(s) 475, 571, 976
RseI CAYNNNNRTG 1 cut(s) 681
SapI GCTCTTC 1 cut(s) 710
SaqAI TTAA 3 cut(s) 77, 576, 1101
SatI GCNGC 3 cut(s) 527, 530, 691
Sau3AI GATC 4 cut(s) 460, 657, 816, 921
Sau96I GGNCC 6 cut(s) 21, 454, 602, 672, 673, 1094
SchI GAGTC 1 cut(s) 268
ScrFI CCNGG 3 cut(s) 671, 710, 1031
SduI GDGCHC 3 cut(s) 315, 676, 849
SfaNI GCATC 3 cut(s) 214, 673, 904
SfuI TTCGAA 1 cut(s) 993
SinI GGWCC 4 cut(s) 21, 454, 602, 1094
SmiMI CAYNNNNRTG 1 cut(s) 681
SmlI CTYRAG 5 cut(s) 368, 464, 575, 740, 809
SmoI CTYRAG 5 cut(s) 368, 464, 575, 740, 809
Sse9I AATT 3 cut(s) 74, 515, 983
SseBI AGGCCT 1 cut(s) 366
SsiI CCGC 2 cut(s) 59, 690
SspMI CTAG 1 cut(s) 941
StuI AGGCCT 1 cut(s) 366
StyD4I CCNGG 3 cut(s) 669, 708, 1029
StyI CCWWGG 3 cut(s) 618, 796, 1035
TaaI ACNGT 1 cut(s) 292
TaqI TCGA 2 cut(s) 92, 993
TasI AATT 3 cut(s) 74, 515, 983
TatI WGTACW 1 cut(s) 474
TauI GCSGC 1 cut(s) 693
TfiI GAWTC 3 cut(s) 268, 550, 967
Tru1I TTAA 3 cut(s) 77, 576, 1101
Tru9I TTAA 3 cut(s) 77, 576, 1101
TscAI CASTG 6 cut(s) 297, 329, 730, 916, 924, 1071
TseFI GTSAC 1 cut(s) 800
TseI GCWGC 2 cut(s) 526, 529
Tsp45I GTSAC 1 cut(s) 800
TspDTI ATGAA 4 cut(s) 503, 882, 1019, 1073
TspGWI ACGGA 1 cut(s) 762
TspRI CASTG 6 cut(s) 297, 329, 730, 916, 924, 1071
Tth111I GACNNNGTC 1 cut(s) 719
Van91I CCANNNNNTGG 1 cut(s) 611
Vha464I CTTAAG 1 cut(s) 575
VpaK11BI GGWCC 4 cut(s) 21, 454, 602, 1094
XagI CCTNNNNNAGG 1 cut(s) 578
XapI RAATTY 1 cut(s) 983
XcmI CCANNNNNNNNNTGG 1 cut(s) 1087
XspI CTAG 1 cut(s) 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.