pycom17g11750

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
9539448 .. 9539916
469 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 378 bp
ATGGGATCGATCACGACTTGCTTTCGAGTTACAGATCTGAATGACCTTGTGTTTAAATTCTCCTTGGAAGCAGTTGAAAGAGTTCATGAAGCTTCAGCAGTTGTTGTTCATACTTTTGATCCATTGGAGCCAGATGTTTTGAGTGCTCTGTCATCTCTACCTCCGCCTGTGCATTCCATTGGCCCTCTCCAATTGCTTCTCAATCAATTTCCAAAAGACCTTTTGAAGCCTATGGGATATAGTATGTGGAAGGAAGAAACTGAGTGCCTCGAATGGTTAAACGCCAAGGCGCGAAATTCAGTTGTTTATGTGAATTTTGGCAGCCTAATATCCCTGACAACACAACAGCTTTTGGAGTTCGTTTGGGGACTATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

126

Amino Acids

14.11

Weight (kDa)

4.86

Isoelectric Point (pI)

28.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019277)

Species Orthologous Gene IDs
malus_domestica MD09G1142600.v1.1
pyrus_communis pycom17g11750
rosa_chinensis RchiOBHm_Chr2g0153931
rosa_laevigata RLG00000020739 RLG00000020767
rosa_multiflora Rmu_co8139412.1_g000001 Rmu_sc0025169.1_g000002
rosa_samantha Rh2BG517100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 292
AciI CCGC 1 cut(s) 164
AclWI GGATC 2 cut(s) 13, 113
AcsI RAATTY 3 cut(s) 56, 295, 313
AcuI CTGAAG 1 cut(s) 78
AgsI TTSAA 2 cut(s) 77, 226
AluBI AGCT 2 cut(s) 92, 349
AluI AGCT 2 cut(s) 92, 349
Alw21I GWGCWC 1 cut(s) 148
AlwI GGATC 2 cut(s) 13, 113
AoxI GGCC 1 cut(s) 181
ApeKI GCWGC 1 cut(s) 321
ApoI RAATTY 3 cut(s) 56, 295, 313
Asp700I GAANNNNTTC 1 cut(s) 81
AspLEI GCGC 1 cut(s) 292
AspS9I GGNCC 1 cut(s) 182
Bbv12I GWGCWC 1 cut(s) 148
BbvI GCAGC 1 cut(s) 333
BglII AGATCT 1 cut(s) 34
BisI GCNGC 1 cut(s) 322
BlsI GCNGC 1 cut(s) 323
BmgT120I GGNCC 1 cut(s) 182
BmiI GGNNCC 1 cut(s) 129
Bsa29I ATCGAT 1 cut(s) 8
BsaJI CCNNGG 2 cut(s) 63, 285
BseCI ATCGAT 1 cut(s) 8
BseDI CCNNGG 2 cut(s) 63, 285
BseMII CTCAG 1 cut(s) 252
BseXI GCAGC 1 cut(s) 333
Bsh1236I CGCG 1 cut(s) 292
BshFI GGCC 1 cut(s) 183
BshVI ATCGAT 1 cut(s) 8
BsiHKAI GWGCWC 1 cut(s) 148
BsmI GAATGC 1 cut(s) 172
BsnI GGCC 1 cut(s) 183
Bsp1286I GDGCHC 1 cut(s) 148
Bsp143I GATC 4 cut(s) 5, 9, 34, 118
BspACI CCGC 1 cut(s) 164
BspANI GGCC 1 cut(s) 183
BspCNI CTCAG 1 cut(s) 253
BspDI ATCGAT 1 cut(s) 8
BspFNI CGCG 1 cut(s) 292
BspHI TCATGA 1 cut(s) 85
BspLI GGNNCC 1 cut(s) 129
BspPI GGATC 2 cut(s) 13, 113
BssECI CCNNGG 2 cut(s) 63, 285
BssMI GATC 4 cut(s) 5, 9, 34, 118
BssT1I CCWWGG 2 cut(s) 63, 285
BstDEI CTNAG 1 cut(s) 261
BstFNI CGCG 1 cut(s) 292
BstHHI GCGC 1 cut(s) 292
BstKTI GATC 4 cut(s) 8, 12, 37, 121
BstMBI GATC 4 cut(s) 5, 9, 34, 118
BstUI CGCG 1 cut(s) 292
BstV1I GCAGC 1 cut(s) 333
BstX2I RGATCY 1 cut(s) 34
BstYI RGATCY 1 cut(s) 34
Bsu15I ATCGAT 1 cut(s) 8
BsuRI GGCC 1 cut(s) 183
BsuTUI ATCGAT 1 cut(s) 8
CciI TCATGA 1 cut(s) 85
CfoI GCGC 1 cut(s) 292
Cfr13I GGNCC 1 cut(s) 182
ClaI ATCGAT 1 cut(s) 8
CviAII CATG 1 cut(s) 86
CviJI RGCY 6 cut(s) 92, 130, 183, 229, 324, 349
CviKI_1 RGCY 6 cut(s) 92, 130, 183, 229, 324, 349
DdeI CTNAG 1 cut(s) 261
DpnI GATC 4 cut(s) 7, 11, 36, 120
DpnII GATC 4 cut(s) 5, 9, 34, 118
DraI TTTAAA 1 cut(s) 55
EciI GGCGGA 1 cut(s) 153
Eco130I CCWWGG 2 cut(s) 63, 285
Eco57I CTGAAG 1 cut(s) 78
EcoT14I CCWWGG 2 cut(s) 63, 285
ErhI CCWWGG 2 cut(s) 63, 285
FaeI CATG 1 cut(s) 89
FaiI YATR 7 cut(s) 87, 111, 233, 240, 245, 309, 373
FatI CATG 1 cut(s) 85
Fnu4HI GCNGC 1 cut(s) 322
Fsp4HI GCNGC 1 cut(s) 322
GlaI GCGC 1 cut(s) 291
GluI GCNGC 1 cut(s) 322
HaeIII GGCC 1 cut(s) 183
HhaI GCGC 1 cut(s) 292
Hin1II CATG 1 cut(s) 89
Hin6I GCGC 1 cut(s) 290
HinP1I GCGC 1 cut(s) 290
HindIII AAGCTT 1 cut(s) 90
Hpy188I TCNGA 1 cut(s) 39
Hpy188III TCNNGA 2 cut(s) 13, 86
HpyAV CCTTC 1 cut(s) 244
HpyCH4V TGCA 1 cut(s) 172
HpyF3I CTNAG 1 cut(s) 261
Hsp92II CATG 1 cut(s) 89
HspAI GCGC 1 cut(s) 290
Kzo9I GATC 4 cut(s) 5, 9, 34, 118
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 3 cut(s) 144, 180, 347
Lsp1109I GCAGC 1 cut(s) 333
MaeIII GTNAC 1 cut(s) 28
MalI GATC 4 cut(s) 7, 11, 36, 120
MboI GATC 4 cut(s) 5, 9, 34, 118
MboII GAAGA 1 cut(s) 266
MfeI CAATTG 1 cut(s) 191
MflI RGATCY 1 cut(s) 34
MhlI GDGCHC 1 cut(s) 148
MluCI AATT 5 cut(s) 56, 191, 206, 295, 313
MnlI CCTC 3 cut(s) 171, 195, 278
MroXI GAANNNNTTC 1 cut(s) 81
MseI TTAA 2 cut(s) 54, 278
MunI CAATTG 1 cut(s) 191
Mva1269I GAATGC 1 cut(s) 172
MvnI CGCG 1 cut(s) 292
NdeII GATC 4 cut(s) 5, 9, 34, 118
NlaIII CATG 1 cut(s) 89
NlaIV GGNNCC 1 cut(s) 129
PagI TCATGA 1 cut(s) 85
PctI GAATGC 1 cut(s) 172
PdmI GAANNNNTTC 1 cut(s) 81
PkrI GCNGC 1 cut(s) 323
PspN4I GGNNCC 1 cut(s) 129
PspPI GGNCC 1 cut(s) 182
PsuI RGATCY 1 cut(s) 34
SaqAI TTAA 2 cut(s) 54, 278
SatI GCNGC 1 cut(s) 322
Sau3AI GATC 4 cut(s) 5, 9, 34, 118
Sau96I GGNCC 1 cut(s) 182
SduI GDGCHC 1 cut(s) 148
SetI ASST 5 cut(s) 48, 94, 163, 222, 351
Sse9I AATT 5 cut(s) 56, 191, 206, 295, 313
SsiI CCGC 1 cut(s) 164
StyI CCWWGG 2 cut(s) 63, 285
TaqI TCGA 3 cut(s) 8, 25, 270
TasI AATT 5 cut(s) 56, 191, 206, 295, 313
Tru1I TTAA 2 cut(s) 54, 278
Tru9I TTAA 2 cut(s) 54, 278
TseI GCWGC 1 cut(s) 321
TspDTI ATGAA 3 cut(s) 74, 98, 102
XapI RAATTY 3 cut(s) 56, 295, 313
XmnI GAANNNNTTC 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.