RchiOBHm_Chr7g0220911

Cell division cycle

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
41858795 .. 41858989
195 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 195 bp
ATGTCAGGTGATTCCCCTACAAAGATTATGACTTGGAGCCGTATCCAAGGTAAGTATATTTGGAGAAATAGGAAGAATAGGGAAAATTTAGATTTGGATAGGTTCATACCCAATCGCGAGGCATTAGACTTAGATTATGCTAGCTATATAGTGGCAGGAGGGAGTACCCACCAAGGAGATTCTAGAAAAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

64

Amino Acids

7.45

Weight (kDa)

9.22

Isoelectric Point (pI)

34.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 117
AcsI RAATTY 1 cut(s) 85
AfaI GTAC 1 cut(s) 166
AluBI AGCT 1 cut(s) 144
AluI AGCT 1 cut(s) 144
ApoI RAATTY 1 cut(s) 85
AsuHPI GGTGA 1 cut(s) 20
AsuNHI GCTAGC 1 cut(s) 140
BceAI ACGGC 1 cut(s) 24
BciVI GTATCC 1 cut(s) 53
BfaI CTAG 2 cut(s) 141, 183
BfuI GTATCC 1 cut(s) 53
BmiI GGNNCC 1 cut(s) 38
BmtI GCTAGC 1 cut(s) 144
BsaJI CCNNGG 2 cut(s) 46, 172
BseDI CCNNGG 2 cut(s) 46, 172
Bsh1236I CGCG 1 cut(s) 117
Bsp68I TCGCGA 1 cut(s) 117
BspFNI CGCG 1 cut(s) 117
BspLI GGNNCC 1 cut(s) 38
BspOI GCTAGC 1 cut(s) 144
BssECI CCNNGG 2 cut(s) 46, 172
BssT1I CCWWGG 2 cut(s) 46, 172
BstC8I GCNNGC 1 cut(s) 142
BstDEI CTNAG 1 cut(s) 130
BstFNI CGCG 1 cut(s) 117
BstUI CGCG 1 cut(s) 117
BsuI GTATCC 1 cut(s) 53
BtuMI TCGCGA 1 cut(s) 117
Cac8I GCNNGC 1 cut(s) 142
Csp6I GTAC 1 cut(s) 165
CviJI RGCY 2 cut(s) 39, 144
CviKI_1 RGCY 2 cut(s) 39, 144
CviQI GTAC 1 cut(s) 165
DdeI CTNAG 1 cut(s) 130
Eco130I CCWWGG 2 cut(s) 46, 172
EcoT14I CCWWGG 2 cut(s) 46, 172
ErhI CCWWGG 2 cut(s) 46, 172
FaiI YATR 6 cut(s) 29, 57, 107, 138, 147, 149
FspBI CTAG 2 cut(s) 141, 183
HinfI GANTC 2 cut(s) 11, 179
HphI GGTGA 1 cut(s) 20
Hpy188III TCNNGA 2 cut(s) 116, 183
HpyF3I CTNAG 1 cut(s) 130
LmnI GCTCC 1 cut(s) 36
LpnPI CCDG 1 cut(s) 141
MaeI CTAG 2 cut(s) 141, 183
MboII GAAGA 1 cut(s) 85
MluCI AATT 1 cut(s) 85
MnlI CCTC 2 cut(s) 112, 152
MvnI CGCG 1 cut(s) 117
NheI GCTAGC 1 cut(s) 140
NlaIV GGNNCC 1 cut(s) 38
NruI TCGCGA 1 cut(s) 117
PfeI GAWTC 2 cut(s) 11, 179
PspN4I GGNNCC 1 cut(s) 38
RruI TCGCGA 1 cut(s) 117
RsaI GTAC 1 cut(s) 166
RsaNI GTAC 1 cut(s) 165
SetI ASST 4 cut(s) 10, 52, 104, 146
SgeI CNNG 8 cut(s) 18, 45, 59, 128, 130, 153, 168, 185
Sse9I AATT 1 cut(s) 85
SspMI CTAG 2 cut(s) 141, 183
StyI CCWWGG 2 cut(s) 46, 172
TasI AATT 1 cut(s) 85
TfiI GAWTC 2 cut(s) 11, 179
TspDTI ATGAA 1 cut(s) 94
XapI RAATTY 1 cut(s) 85
XbaI TCTAGA 1 cut(s) 182
XspI CTAG 2 cut(s) 141, 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.