RchiOBHm_Chr7g0226951

Potassium channel

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
50311156 .. 50313278
2123 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 333 bp
ATGTTGGGTGTGTATTTCTTAACCGGGTCGGTCATCCTCTTCAAGTTAGGAGTCTTCAAACTGACTCTCAAATCCAATTCTCGAGAGGTAGGAATCAAAGTCCGCAGGACAACTCGTGCGCTCATCGCTTGTCTTATCGTAGGTGCTTTCGTGTTACAGCTCCTAGAGGGTATCAGCTCCAGGGATTTCTTTTCTTTCTTCATGGGCTGTGGAGATATTTCTCCCAAAACAGACAAGGGCAGGTGGTTTGCAAGCTTTTGGATACTTGTCAGTGTATCACTGCTTTCCAAGGCTGTTCGCCACATGATTGAGTTTGTACTCGTCAGTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

110

Amino Acids

12.28

Weight (kDa)

10.22

Isoelectric Point (pI)

32.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019033)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 231
Acc36I ACCTGC 1 cut(s) 231
AciI CCGC 1 cut(s) 103
AfaI GTAC 1 cut(s) 318
AgsI TTSAA 2 cut(s) 43, 58
AjnI CCWGG 1 cut(s) 179
AluBI AGCT 3 cut(s) 160, 177, 255
AluI AGCT 3 cut(s) 160, 177, 255
Ama87I CYCGRG 1 cut(s) 81
AspLEI GCGC 1 cut(s) 121
AsuC2I CCSGG 1 cut(s) 25
AvaI CYCGRG 1 cut(s) 81
BauI CACGAG 1 cut(s) 114
BbsI GAAGAC 1 cut(s) 46
BciT130I CCWGG 1 cut(s) 181
BciVI GTATCC 1 cut(s) 255
BcnI CCSGG 1 cut(s) 25
BfaI CTAG 1 cut(s) 164
BfuAI ACCTGC 1 cut(s) 231
BfuI GTATCC 1 cut(s) 255
Bme1390I CCNGG 2 cut(s) 25, 181
BmeT110I CYCGRG 1 cut(s) 81
BmrFI CCNGG 2 cut(s) 25, 181
BpiI GAAGAC 1 cut(s) 46
BpmI CTGGAG 1 cut(s) 163
BpuMI CCSGG 1 cut(s) 25
BsaJI CCNNGG 2 cut(s) 180, 288
BseBI CCWGG 1 cut(s) 181
BseDI CCNNGG 2 cut(s) 180, 288
BseGI GGATG 1 cut(s) 33
BsiHKCI CYCGRG 1 cut(s) 81
BsiSI CCGG 1 cut(s) 24
BsoBI CYCGRG 1 cut(s) 81
BspACI CCGC 1 cut(s) 103
BspMI ACCTGC 1 cut(s) 231
BssECI CCNNGG 2 cut(s) 180, 288
BssSI CACGAG 1 cut(s) 114
BssT1I CCWWGG 1 cut(s) 288
Bst2BI CACGAG 1 cut(s) 114
Bst2UI CCWGG 1 cut(s) 181
Bst6I CTCTTC 1 cut(s) 44
BstC8I GCNNGC 1 cut(s) 253
BstF5I GGATG 1 cut(s) 33
BstHHI GCGC 1 cut(s) 121
BstMWI GCNNNNNNNGC 1 cut(s) 125
BstNI CCWGG 1 cut(s) 181
BstSCI CCNGG 2 cut(s) 23, 179
BstV2I GAAGAC 1 cut(s) 46
BsuI GTATCC 1 cut(s) 255
BtgZI GCGATG 1 cut(s) 109
BtsCI GGATG 1 cut(s) 33
BtsI GCAGTG 1 cut(s) 278
BtsIMutI CAGTG 3 cut(s) 277, 278, 331
BveI ACCTGC 1 cut(s) 231
Cac8I GCNNGC 1 cut(s) 253
CfoI GCGC 1 cut(s) 121
Csp6I GTAC 1 cut(s) 317
CviAII CATG 2 cut(s) 202, 304
CviJI RGCY 5 cut(s) 160, 177, 207, 255, 293
CviKI_1 RGCY 5 cut(s) 160, 177, 207, 255, 293
CviQI GTAC 1 cut(s) 317
Eam1104I CTCTTC 1 cut(s) 44
EarI CTCTTC 1 cut(s) 44
Eco130I CCWWGG 1 cut(s) 288
Eco88I CYCGRG 1 cut(s) 81
EcoRII CCWGG 1 cut(s) 179
EcoT14I CCWWGG 1 cut(s) 288
ErhI CCWWGG 1 cut(s) 288
FaeI CATG 2 cut(s) 205, 307
FaiI YATR 2 cut(s) 203, 305
FatI CATG 2 cut(s) 201, 303
FokI GGATG 1 cut(s) 20
FspBI CTAG 1 cut(s) 164
GlaI GCGC 1 cut(s) 120
GsuI CTGGAG 1 cut(s) 163
HapII CCGG 1 cut(s) 24
HhaI GCGC 1 cut(s) 121
Hin1II CATG 2 cut(s) 205, 307
Hin6I GCGC 1 cut(s) 119
HinP1I GCGC 1 cut(s) 119
HindIII AAGCTT 1 cut(s) 253
HinfI GANTC 3 cut(s) 51, 64, 93
HpaII CCGG 1 cut(s) 24
Hpy188III TCNNGA 2 cut(s) 81, 83
HpyCH4V TGCA 1 cut(s) 251
HpyF10VI GCNNNNNNNGC 1 cut(s) 125
Hsp92II CATG 2 cut(s) 205, 307
HspAI GCGC 1 cut(s) 119
LmnI GCTCC 2 cut(s) 165, 182
LpnPI CCDG 5 cut(s) 37, 91, 166, 193, 226
MaeI CTAG 1 cut(s) 164
MaeIII GTNAC 1 cut(s) 153
MboII GAAGA 3 cut(s) 31, 46, 190
MluCI AATT 1 cut(s) 76
MlyI GAGTC 2 cut(s) 58, 60
MnlI CCTC 3 cut(s) 47, 79, 160
MseI TTAA 2 cut(s) 20, 331
MspI CCGG 1 cut(s) 24
MspR9I CCNGG 2 cut(s) 25, 181
MvaI CCWGG 1 cut(s) 181
MwoI GCNNNNNNNGC 1 cut(s) 125
NciI CCSGG 1 cut(s) 25
NlaIII CATG 2 cut(s) 205, 307
PaeR7I CTCGAG 1 cut(s) 81
PaqCI CACCTGC 1 cut(s) 231
PfeI GAWTC 1 cut(s) 93
PleI GAGTC 2 cut(s) 58, 59
PpsI GAGTC 2 cut(s) 58, 59
Psp6I CCWGG 1 cut(s) 179
PspGI CCWGG 1 cut(s) 179
RsaI GTAC 1 cut(s) 318
RsaNI GTAC 1 cut(s) 317
SaqAI TTAA 2 cut(s) 20, 331
SchI GAGTC 2 cut(s) 58, 60
ScrFI CCNGG 2 cut(s) 25, 181
SetI ASST 6 cut(s) 90, 145, 162, 179, 245, 257
Sfr274I CTCGAG 1 cut(s) 81
SlaI CTCGAG 1 cut(s) 81
SmlI CTYRAG 1 cut(s) 81
SmoI CTYRAG 1 cut(s) 81
Sse9I AATT 1 cut(s) 76
SsiI CCGC 1 cut(s) 103
SspMI CTAG 1 cut(s) 164
StyD4I CCNGG 2 cut(s) 23, 179
StyI CCWWGG 1 cut(s) 288
TaqI TCGA 1 cut(s) 82
TaqII GACCGA 1 cut(s) 19
TasI AATT 1 cut(s) 76
TatI WGTACW 1 cut(s) 316
TfiI GAWTC 1 cut(s) 93
Tru1I TTAA 2 cut(s) 20, 331
Tru9I TTAA 2 cut(s) 20, 331
TscAI CASTG 3 cut(s) 277, 285, 331
TspDTI ATGAA 1 cut(s) 190
TspRI CASTG 3 cut(s) 277, 285, 331
XhoI CTCGAG 1 cut(s) 81
XspI CTAG 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.