RchiOBHm_Chr7g0242481

Belongs to the peroxidase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
68551342 .. 68552803
1462 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 183 bp
ATGATTCATTGGGGGTTACTGTACTGTACTTTGATTTCTTCCATTACCTCTGCCCTAAGATATCCTACTCTTGGTGTTACAGTTAGTTGCAGTAAAATTGAAGCTGATGCTGATAATGAGGACAGGTTAAGCGGAGGAGCATTCTTACATGTTTTGGTGCCACTGTCGGCTTGGAATTTGTAA

Protein Analysis

60

Amino Acids

6.52

Weight (kDa)

5.34

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019962)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 157
AciI CCGC 1 cut(s) 132
AcsI RAATTY 1 cut(s) 175
AfaI GTAC 2 cut(s) 23, 28
AfiI CCNNNNNNNGG 1 cut(s) 71
AflIII ACRYGT 1 cut(s) 148
AgsI TTSAA 1 cut(s) 101
AluBI AGCT 1 cut(s) 104
AluI AGCT 1 cut(s) 104
ApoI RAATTY 1 cut(s) 175
BanI GGYRCC 1 cut(s) 157
BmiI GGNNCC 1 cut(s) 159
BmsI GCATC 1 cut(s) 97
Bsc4I CCNNNNNNNGG 1 cut(s) 71
BseLI CCNNNNNNNGG 1 cut(s) 71
BseRI GAGGAG 1 cut(s) 150
BshNI GGYRCC 1 cut(s) 157
BslI CCNNNNNNNGG 1 cut(s) 71
BsmI GAATGC 1 cut(s) 140
BspACI CCGC 1 cut(s) 132
BspLI GGNNCC 1 cut(s) 159
BspT107I GGYRCC 1 cut(s) 157
Bst4CI ACNGT 4 cut(s) 21, 26, 82, 165
BstDEI CTNAG 1 cut(s) 56
BstNSI RCATGY 1 cut(s) 152
BtsIMutI CAGTG 1 cut(s) 161
Csp6I GTAC 2 cut(s) 22, 27
CviAII CATG 1 cut(s) 149
CviJI RGCY 2 cut(s) 104, 170
CviKI_1 RGCY 2 cut(s) 104, 170
CviQI GTAC 2 cut(s) 22, 27
DdeI CTNAG 1 cut(s) 56
Eco32I GATATC 1 cut(s) 62
EcoRV GATATC 1 cut(s) 62
FaeI CATG 1 cut(s) 152
FaiI YATR 1 cut(s) 150
FatI CATG 1 cut(s) 148
Hin1II CATG 1 cut(s) 152
HinfI GANTC 1 cut(s) 4
HpyCH4III ACNGT 4 cut(s) 21, 26, 82, 165
HpyCH4V TGCA 1 cut(s) 90
HpyF3I CTNAG 1 cut(s) 56
Hsp92II CATG 1 cut(s) 152
LmnI GCTCC 1 cut(s) 137
LpnPI CCDG 1 cut(s) 109
LweI GCATC 1 cut(s) 97
MaeIII GTNAC 2 cut(s) 15, 76
MboII GAAGA 1 cut(s) 30
MluCI AATT 2 cut(s) 96, 175
MnlI CCTC 3 cut(s) 58, 112, 128
MseI TTAA 1 cut(s) 128
Mva1269I GAATGC 1 cut(s) 140
NlaIII CATG 1 cut(s) 152
NlaIV GGNNCC 1 cut(s) 159
NspI RCATGY 1 cut(s) 152
PciI ACATGT 1 cut(s) 148
PctI GAATGC 1 cut(s) 140
PfeI GAWTC 1 cut(s) 4
PscI ACATGT 1 cut(s) 148
PspN4I GGNNCC 1 cut(s) 159
RsaI GTAC 2 cut(s) 23, 28
RsaNI GTAC 2 cut(s) 22, 27
SaqAI TTAA 1 cut(s) 128
SetI ASST 3 cut(s) 50, 106, 128
SfaNI GCATC 1 cut(s) 97
SgeI CNNG 3 cut(s) 83, 136, 161
Sse9I AATT 2 cut(s) 96, 175
SsiI CCGC 1 cut(s) 132
TaaI ACNGT 4 cut(s) 21, 26, 82, 165
TasI AATT 2 cut(s) 96, 175
TatI WGTACW 2 cut(s) 21, 26
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 1 cut(s) 128
Tru9I TTAA 1 cut(s) 128
TscAI CASTG 1 cut(s) 168
TspRI CASTG 1 cut(s) 168
XapI RAATTY 1 cut(s) 175
XceI RCATGY 1 cut(s) 152
XcmI CCANNNNNNNNNTGG 1 cut(s) 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.