Rh7BG440900

Belongs to the peroxidase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
50859359 .. 50864678
5320 bp
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UTR
Exon/CDS
Intron
Rh7BG440900.1

Sequence Viewer

Length: 351 bp
ATGATTCATGATTCATTGGGGTTACTGTACTGTACTTTGATTTCTTCCATTACCTCTGCCCTAAGATATCCTATTCTTGGTGCTACAATTCGTTGCAGTAAAATTGAAGTTGATGCTGATAATGAGGACAGGTTTAAGCGGAGGAGCATTCTTACATGCTTTGGTGCCGCTGTCGGCTTGGAATTAGTAAGAAGCTCAGGAACATTTGTTGAAATGGCTGAGGCTGCTGATTTGATACAACGAAGGCAGCGTTCTGACTTTCAATATAAGTTTTTAGAATGGTTTTATTCTCAATGCTATACTGGAATCATCTACAATCTGCTGCTGATCCAGATTCATATTCCTTACTAA

Protein Analysis

116

Amino Acids

13.34

Weight (kDa)

6.71

Isoelectric Point (pI)

52.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019962)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 164
AciI CCGC 2 cut(s) 139, 168
AclWI GGATC 1 cut(s) 322
AfaI GTAC 2 cut(s) 29, 34
AfiI CCNNNNNNNGG 1 cut(s) 77
AgsI TTSAA 3 cut(s) 107, 212, 263
AluBI AGCT 1 cut(s) 195
AluI AGCT 1 cut(s) 195
AlwI GGATC 1 cut(s) 322
ApeKI GCWGC 3 cut(s) 224, 247, 322
BanI GGYRCC 1 cut(s) 164
BbvCI CCTCAGC 1 cut(s) 219
BbvI GCAGC 3 cut(s) 211, 259, 309
BisI GCNGC 4 cut(s) 168, 225, 248, 323
BlsI GCNGC 4 cut(s) 169, 226, 249, 324
BmiI GGNNCC 1 cut(s) 166
BmsI GCATC 1 cut(s) 103
Bpu10I CCTNAGC 2 cut(s) 196, 219
Bsc4I CCNNNNNNNGG 1 cut(s) 77
Bse1I ACTGG 1 cut(s) 307
BseLI CCNNNNNNNGG 1 cut(s) 77
BseMII CTCAG 2 cut(s) 210, 210
BseNI ACTGG 1 cut(s) 307
BseRI GAGGAG 1 cut(s) 157
BseXI GCAGC 3 cut(s) 211, 259, 309
BshNI GGYRCC 1 cut(s) 164
BslI CCNNNNNNNGG 1 cut(s) 77
BsmI GAATGC 1 cut(s) 147
Bsp143I GATC 1 cut(s) 327
BspACI CCGC 2 cut(s) 139, 168
BspCNI CTCAG 2 cut(s) 209, 211
BspHI TCATGA 1 cut(s) 7
BspLI GGNNCC 1 cut(s) 166
BspPI GGATC 1 cut(s) 322
BspT107I GGYRCC 1 cut(s) 164
BsrI ACTGG 1 cut(s) 307
BssMI GATC 1 cut(s) 327
Bst4CI ACNGT 2 cut(s) 27, 32
BstDEI CTNAG 3 cut(s) 62, 196, 219
BstKTI GATC 1 cut(s) 330
BstMBI GATC 1 cut(s) 327
BstMWI GCNNNNNNNGC 1 cut(s) 224
BstNSI RCATGY 1 cut(s) 159
BstV1I GCAGC 3 cut(s) 211, 259, 309
CciI TCATGA 1 cut(s) 7
Csp6I GTAC 2 cut(s) 28, 33
CviAII CATG 2 cut(s) 8, 156
CviJI RGCY 4 cut(s) 177, 195, 218, 224
CviKI_1 RGCY 4 cut(s) 177, 195, 218, 224
CviQI GTAC 2 cut(s) 28, 33
DdeI CTNAG 3 cut(s) 62, 196, 219
DpnI GATC 1 cut(s) 329
DpnII GATC 1 cut(s) 327
Eco32I GATATC 1 cut(s) 68
EcoRV GATATC 1 cut(s) 68
FaeI CATG 2 cut(s) 11, 159
FaiI YATR 5 cut(s) 9, 157, 267, 300, 339
FatI CATG 2 cut(s) 7, 155
Fnu4HI GCNGC 4 cut(s) 168, 225, 248, 323
Fsp4HI GCNGC 4 cut(s) 168, 225, 248, 323
GluI GCNGC 4 cut(s) 168, 225, 248, 323
Hin1II CATG 2 cut(s) 11, 159
HinfI GANTC 4 cut(s) 4, 11, 306, 334
Hpy188I TCNGA 1 cut(s) 256
Hpy188III TCNNGA 3 cut(s) 8, 198, 331
HpyAV CCTTC 1 cut(s) 237
HpyCH4III ACNGT 2 cut(s) 27, 32
HpyCH4V TGCA 1 cut(s) 96
HpyF10VI GCNNNNNNNGC 1 cut(s) 224
HpyF3I CTNAG 3 cut(s) 62, 196, 219
Hsp92II CATG 2 cut(s) 11, 159
Kzo9I GATC 1 cut(s) 327
LmnI GCTCC 1 cut(s) 144
LpnPI CCDG 4 cut(s) 115, 183, 288, 344
Lsp1109I GCAGC 3 cut(s) 211, 259, 309
LweI GCATC 1 cut(s) 103
MaeIII GTNAC 1 cut(s) 21
MalI GATC 1 cut(s) 329
MboI GATC 1 cut(s) 327
MboII GAAGA 1 cut(s) 36
MluCI AATT 3 cut(s) 87, 102, 182
MnlI CCTC 4 cut(s) 64, 118, 135, 214
MseI TTAA 1 cut(s) 135
MspA1I CMGCKG 1 cut(s) 170
Mva1269I GAATGC 1 cut(s) 147
MwoI GCNNNNNNNGC 1 cut(s) 224
NdeII GATC 1 cut(s) 327
NlaIII CATG 2 cut(s) 11, 159
NlaIV GGNNCC 1 cut(s) 166
NspI RCATGY 1 cut(s) 159
PagI TCATGA 1 cut(s) 7
PcsI WCGNNNNNNNCGW 1 cut(s) 247
PctI GAATGC 1 cut(s) 147
PfeI GAWTC 4 cut(s) 4, 11, 306, 334
PkrI GCNGC 4 cut(s) 169, 226, 249, 324
PspN4I GGNNCC 1 cut(s) 166
RsaI GTAC 2 cut(s) 29, 34
RsaNI GTAC 2 cut(s) 28, 33
SaqAI TTAA 1 cut(s) 135
SatI GCNGC 4 cut(s) 168, 225, 248, 323
Sau3AI GATC 1 cut(s) 327
SetI ASST 3 cut(s) 56, 134, 197
SfaNI GCATC 1 cut(s) 103
SgeI CNNG 8 cut(s) 20, 89, 142, 168, 190, 210, 315, 343
Sse9I AATT 3 cut(s) 87, 102, 182
SsiI CCGC 2 cut(s) 139, 168
TaaI ACNGT 2 cut(s) 27, 32
TasI AATT 3 cut(s) 87, 102, 182
TatI WGTACW 2 cut(s) 27, 32
TauI GCSGC 1 cut(s) 170
TfiI GAWTC 4 cut(s) 4, 11, 306, 334
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TseI GCWGC 3 cut(s) 224, 247, 322
TspDTI ATGAA 1 cut(s) 326
XceI RCATGY 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.