Polyketide cyclase / dehydrase and lipid transport
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0242481 |
| rosa_samantha | Rh1CG079500 Rh1DG085700 Rh4AG131000 Rh6AG454400 Rh6CG330700 Rh7BG440900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 26, 83 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 154 |
| AgsI | TTSAA | 2 cut(s) | 63, 205 |
| AluBI | AGCT | 1 cut(s) | 114 |
| AluI | AGCT | 1 cut(s) | 114 |
| AoxI | GGCC | 1 cut(s) | 156 |
| ApeKI | GCWGC | 1 cut(s) | 277 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 200 |
| AspLEI | GCGC | 2 cut(s) | 82, 147 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| AsuII | TTCGAA | 1 cut(s) | 267 |
| BbsI | GAAGAC | 1 cut(s) | 6 |
| BbvI | GCAGC | 1 cut(s) | 264 |
| BccI | CCATC | 1 cut(s) | 35 |
| BfoI | RGCGCY | 2 cut(s) | 83, 148 |
| BisI | GCNGC | 2 cut(s) | 83, 278 |
| BlsI | GCNGC | 2 cut(s) | 84, 279 |
| BmiI | GGNNCC | 1 cut(s) | 46 |
| BpiI | GAAGAC | 1 cut(s) | 6 |
| Bpu14I | TTCGAA | 1 cut(s) | 267 |
| Bsa29I | ATCGAT | 1 cut(s) | 183 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 154 |
| Bse3DI | GCAATG | 1 cut(s) | 272 |
| BseCI | ATCGAT | 1 cut(s) | 183 |
| BseGI | GGATG | 1 cut(s) | 231 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseMI | GCAATG | 1 cut(s) | 272 |
| BseRI | GAGGAG | 1 cut(s) | 108 |
| BseXI | GCAGC | 1 cut(s) | 264 |
| BshFI | GGCC | 1 cut(s) | 158 |
| BshVI | ATCGAT | 1 cut(s) | 183 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BsmI | GAATGC | 1 cut(s) | 202 |
| BsnI | GGCC | 1 cut(s) | 158 |
| Bsp119I | TTCGAA | 1 cut(s) | 267 |
| Bsp143I | GATC | 3 cut(s) | 251, 286, 303 |
| BspACI | CCGC | 2 cut(s) | 26, 83 |
| BspANI | GGCC | 1 cut(s) | 158 |
| BspDI | ATCGAT | 1 cut(s) | 183 |
| BspLI | GGNNCC | 1 cut(s) | 46 |
| BspT104I | TTCGAA | 1 cut(s) | 267 |
| BsrDI | GCAATG | 1 cut(s) | 272 |
| BssMI | GATC | 3 cut(s) | 251, 286, 303 |
| Bst6I | CTCTTC | 2 cut(s) | 24, 93 |
| BstBI | TTCGAA | 1 cut(s) | 267 |
| BstDEI | CTNAG | 1 cut(s) | 296 |
| BstF5I | GGATG | 1 cut(s) | 231 |
| BstH2I | RGCGCY | 2 cut(s) | 83, 148 |
| BstHHI | GCGC | 2 cut(s) | 82, 147 |
| BstKTI | GATC | 3 cut(s) | 254, 289, 306 |
| BstMBI | GATC | 3 cut(s) | 251, 286, 303 |
| BstV1I | GCAGC | 1 cut(s) | 264 |
| BstV2I | GAAGAC | 1 cut(s) | 6 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 64 |
| Bsu15I | ATCGAT | 1 cut(s) | 183 |
| BsuRI | GGCC | 1 cut(s) | 158 |
| BsuTUI | ATCGAT | 1 cut(s) | 183 |
| BtsCI | GGATG | 1 cut(s) | 231 |
| CfoI | GCGC | 2 cut(s) | 82, 147 |
| ClaI | ATCGAT | 1 cut(s) | 183 |
| CviAII | CATG | 1 cut(s) | 9 |
| CviJI | RGCY | 3 cut(s) | 47, 114, 158 |
| CviKI_1 | RGCY | 3 cut(s) | 47, 114, 158 |
| DdeI | CTNAG | 1 cut(s) | 296 |
| DpnI | GATC | 3 cut(s) | 253, 288, 305 |
| DpnII | GATC | 3 cut(s) | 251, 286, 303 |
| Eam1104I | CTCTTC | 2 cut(s) | 24, 93 |
| EarI | CTCTTC | 2 cut(s) | 24, 93 |
| EciI | GGCGGA | 1 cut(s) | 15 |
| FaeI | CATG | 1 cut(s) | 12 |
| FaiI | YATR | 2 cut(s) | 10, 128 |
| FatI | CATG | 1 cut(s) | 8 |
| Fnu4HI | GCNGC | 2 cut(s) | 83, 278 |
| FokI | GGATG | 1 cut(s) | 218 |
| Fsp4HI | GCNGC | 2 cut(s) | 83, 278 |
| GlaI | GCGC | 2 cut(s) | 81, 146 |
| GluI | GCNGC | 2 cut(s) | 83, 278 |
| HaeII | RGCGCY | 2 cut(s) | 83, 148 |
| HaeIII | GGCC | 1 cut(s) | 158 |
| HhaI | GCGC | 2 cut(s) | 82, 147 |
| Hin1II | CATG | 1 cut(s) | 12 |
| Hin6I | GCGC | 2 cut(s) | 80, 145 |
| HinP1I | GCGC | 2 cut(s) | 80, 145 |
| HincII | GTYRAC | 1 cut(s) | 226 |
| HindII | GTYRAC | 1 cut(s) | 226 |
| HinfI | GANTC | 2 cut(s) | 185, 260 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy166II | GTNNAC | 1 cut(s) | 226 |
| Hpy8I | GTNNAC | 1 cut(s) | 226 |
| HpyAV | CCTTC | 2 cut(s) | 99, 314 |
| HpyCH4V | TGCA | 1 cut(s) | 8 |
| HpyF3I | CTNAG | 1 cut(s) | 296 |
| Hsp92II | CATG | 1 cut(s) | 12 |
| HspAI | GCGC | 2 cut(s) | 80, 145 |
| Kzo9I | GATC | 3 cut(s) | 251, 286, 303 |
| LmnI | GCTCC | 2 cut(s) | 44, 142 |
| LpnPI | CCDG | 5 cut(s) | 51, 61, 153, 262, 266 |
| Lsp1109I | GCAGC | 1 cut(s) | 264 |
| MaeIII | GTNAC | 1 cut(s) | 50 |
| MalI | GATC | 3 cut(s) | 253, 288, 305 |
| MboI | GATC | 3 cut(s) | 251, 286, 303 |
| MboII | GAAGA | 5 cut(s) | 6, 11, 110, 296, 329 |
| MmeI | TCCRAC | 1 cut(s) | 120 |
| MnlI | CCTC | 5 cut(s) | 33, 86, 230, 284, 304 |
| MroXI | GAANNNNTTC | 1 cut(s) | 200 |
| MslI | CAYNNNNRTG | 1 cut(s) | 62 |
| Mva1269I | GAATGC | 1 cut(s) | 202 |
| NdeII | GATC | 3 cut(s) | 251, 286, 303 |
| NlaIII | CATG | 1 cut(s) | 12 |
| NlaIV | GGNNCC | 1 cut(s) | 46 |
| NmeAIII | GCCGAG | 1 cut(s) | 184 |
| NmuCI | GTSAC | 1 cut(s) | 50 |
| NspV | TTCGAA | 1 cut(s) | 267 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 180, 219, 264 |
| PctI | GAATGC | 1 cut(s) | 202 |
| PdmI | GAANNNNTTC | 1 cut(s) | 200 |
| PfeI | GAWTC | 2 cut(s) | 185, 260 |
| PkrI | GCNGC | 2 cut(s) | 84, 279 |
| PspN4I | GGNNCC | 1 cut(s) | 46 |
| RseI | CAYNNNNRTG | 1 cut(s) | 62 |
| SatI | GCNGC | 2 cut(s) | 83, 278 |
| Sau3AI | GATC | 3 cut(s) | 251, 286, 303 |
| SetI | ASST | 1 cut(s) | 116 |
| SfuI | TTCGAA | 1 cut(s) | 267 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 62 |
| SsiI | CCGC | 2 cut(s) | 26, 83 |
| TaqI | TCGA | 4 cut(s) | 183, 258, 267, 289 |
| TauI | GCSGC | 1 cut(s) | 85 |
| TfiI | GAWTC | 2 cut(s) | 185, 260 |
| TseFI | GTSAC | 1 cut(s) | 50 |
| TseI | GCWGC | 1 cut(s) | 277 |
| Tsp45I | GTSAC | 1 cut(s) | 50 |
| TspDTI | ATGAA | 1 cut(s) | 220 |
| XmnI | GAANNNNTTC | 1 cut(s) | 200 |