RchiOBHm_Chr6g0267191

MatE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0016752
Physical Location & Seq
Reverse (-)
23793404 .. 23799055
5652 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1629 bp
ATGAATCTGAAAACCATGGCGCTCCATTCCCACACTACTCACCTCCAAACCCGTAAGCGCTTATCTCACCCTTCAATCTTGTACAACCCATTTCACCGCAGCTCTGTTCGTTACGCCGTTAAGCCGCGAAGTTTTGGTGCTTTGGTGGCGAAAAGCGAGCGTGGCAATGGACGGCTGATAACGGCGTGCATTGCTGGCGGTAATGCTGACGCATTTGAAGAGGAGCAAGTGGTGGTGGAGGTCGTGGGTTCGAAGAAGGAGGAGTTGGTGGAGCAAAGCCTATGGAAGCAGGTGAAGGACATTGTCATGTTTTCGGGTCCGGCCACCGGGTTGTGGATTTGTGGGCCGTTGATGAGTCTCATCTCCACCGCTGTTATCGGCCAGGCTAGCTCTACTGAGCTTGCTGCTTTGGGACCGGGAACTGTCTTCTGTGATAACATGAATCTTTTGTTCATGTTCCTTTCGATTGCGACTTCTAATATGGTTGCCACTGCGCTTGCCAAAAGGGATAAAAAGGAACTGCAGCATCAGATATCTATATTGCTCTTCGTTGGATTGACTTGTGGAGTTCTGATGCTCTTGTTTACACAATTCCTTGGTTCATGGGCGCTAACAGCTTTTGCTGGGCCCAAGAATGTGCATATTATACCTGCAGCAAGCAAATATGTTCAGATTCGGGGGTTAGCATGGCCTGCGATTCTTTTTGGATTGGTTGCTCAAAGCGCAAGTCTTGGCATGAAAGATTCATTGGGACCTTTAAAAGCTCTGGTGGTTGCCAGTGTTGTGAATGGCCTTGGTCATGTAGTCCTATGCAACATGTTACACTATGGTATTACTGGTGCAGCATGGGCAACAATGGCATCGCAGATTGTTGCTGCTTGTATGATGATTGAAGCTCTGAACAAGAAAGGATTTAGTGCATTTTCCATCACTGTTCCATCGCCTCGTGAATGTTTGCTAATATTTGGGATTGCAGGTCCAGTGTTTGTAACAATGTTCTCAAAGGTGGCCTTCTACTCACTGATGACATACTTTGCTACTGCTATGGGTACAAATATAGTTGCTGCTCATCAGGTCATGATCCAAATGTACGGGATGTGCGTGGTATGGGGTGAGCCTCTTTCTCAAACTGCACAATCGTTTATGCCCGAGTTATTGTACGGAGTTAACCGAAGTTTGGAGAAGGCCCGAATGCTGCTAAAGTCACTCGTAATTATTGGAGCTATTCTTGGATTGGCAATAGGGGTTATTGGGATGTCCGTTCCTTGGTTGTTCCCCAATATCTTTACATTTGACCTGAAAGTCATACAAGAGATGCACAAAGTATTGTTTCTGTTCTTCCTGTCGTTATCTATTACGCCCTGTACTCACAGCCTTGAGGGCACATTGCTGGCTGGACGTGATCTTACCTTCATCAGCTTGTCAATGAGTAGTTGTTTTTCCTTGGGTGCTCTTCTACTGTTGCTTGTGAACAGCAGAGGATTTGGTTTGCCAGGCTGCTGGTTTGCGCTTGTTGGCTTTCAATGGGCTCGATTTTTCCTTGCTCTCCGACGGCTTCTTTCTCCCAATGGCATGCTCCATTCAGAAGATCTGGGCTCGTATAAAGTGGGGAAGTTGAAAGCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

542

Amino Acids

58.74

Weight (kDa)

9.42

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 114 - 263 3.1e-15 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016752)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10120 FvH4_2g10120 FvH4_2g10120 FvH4_2g10120
rosa_chinensis RchiOBHm_Chr6g0267191
rosa_laevigata RLG00000014020
rosa_multiflora Rmu_sc0000908.1_g000024 Rmu_ssc0000388.1_g000047
rosa_roxburghii Rroxscaffold_7G00201000
rosa_rugosa Rorug06G0030400
rosa_samantha Rh6BG152600 Rh6CG148500 Rh6DG136800
rosa_wichuraiana Rw6G013140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 280
AasI GACNNNNNNGTC 1 cut(s) 1301
Acc36I ACCTGC 3 cut(s) 280, 658, 965
AccII CGCG 1 cut(s) 127
AciI CCGC 4 cut(s) 97, 125, 198, 369
AclWI GGATC 1 cut(s) 1075
AcoI YGGCCR 2 cut(s) 321, 379
AfaI GTAC 5 cut(s) 83, 1051, 1091, 1160, 1366
AfeI AGCGCT 1 cut(s) 59
AfiI CCNNNNNNNGG 4 cut(s) 326, 333, 1177, 1266
AflIII ACRYGT 1 cut(s) 816
AgsI TTSAA 5 cut(s) 75, 218, 893, 1523, 1618
AjiI CACGTC 1 cut(s) 1400
AjnI CCWGG 2 cut(s) 381, 1492
AjuI GAANNNNNNNTTGG 4 cut(s) 248, 280, 731, 763
AluBI AGCT 9 cut(s) 102, 390, 400, 617, 764, 896, 1223, 1419, 1622
AluI AGCT 9 cut(s) 102, 390, 400, 617, 764, 896, 1223, 1419, 1622
Alw21I GWGCWC 1 cut(s) 1453
Alw26I GTCTC 1 cut(s) 362
AlwI GGATC 1 cut(s) 1075
Ama87I CYCGRG 1 cut(s) 1148
Aor51HI AGCGCT 1 cut(s) 59
AoxI GGCC 8 cut(s) 321, 344, 379, 626, 689, 790, 1008, 1185
ApaI GGGCCC 1 cut(s) 630
ApeKI GCWGC 9 cut(s) 99, 404, 523, 653, 842, 875, 1064, 1195, 1497
ArsI GACNNNNNNTTYG 2 cut(s) 712, 744
AspLEI GCGC 6 cut(s) 22, 60, 496, 610, 725, 1510
AspS9I GGNCC 8 cut(s) 317, 344, 413, 626, 627, 752, 977, 1186
AsuC2I CCSGG 2 cut(s) 328, 417
AsuHPI GGTGA 5 cut(s) 32, 59, 86, 304, 1124
AsuII TTCGAA 1 cut(s) 251
AsuNHI GCTAGC 1 cut(s) 386
AvaI CYCGRG 1 cut(s) 1148
AvaII GGWCC 4 cut(s) 317, 413, 752, 977
BaeGI GKGCMC 2 cut(s) 630, 1385
BanII GRGCYC 3 cut(s) 630, 1531, 1598
BauI CACGAG 1 cut(s) 945
BbsI GAAGAC 1 cut(s) 418
Bbv12I GWGCWC 1 cut(s) 1453
BbvI GCAGC 9 cut(s) 111, 391, 535, 665, 854, 862, 1051, 1182, 1484
BccI CCATC 2 cut(s) 935, 946
BceAI ACGGC 5 cut(s) 101, 188, 198, 331, 1568
BciT130I CCWGG 2 cut(s) 383, 1494
BcnI CCSGG 2 cut(s) 328, 417
BcoDI GTCTC 1 cut(s) 362
BfaI CTAG 1 cut(s) 387
BfmI CTRYAG 2 cut(s) 521, 651
BfoI RGCGCY 3 cut(s) 23, 61, 611
BfuAI ACCTGC 3 cut(s) 280, 658, 965
BglI GCCNNNNNGGC 1 cut(s) 1380
BglII AGATCT 1 cut(s) 1588
Bme1390I CCNGG 4 cut(s) 328, 383, 417, 1494
Bme18I GGWCC 4 cut(s) 317, 413, 752, 977
BmeT110I CYCGRG 1 cut(s) 1148
BmgBI CACGTC 1 cut(s) 1400
BmgT120I GGNCC 8 cut(s) 317, 344, 413, 626, 627, 752, 977, 1186
BmiI GGNNCC 4 cut(s) 318, 414, 628, 753
BmrFI CCNGG 4 cut(s) 328, 383, 417, 1494
BmsI GCATC 4 cut(s) 535, 564, 869, 1305
BmtI GCTAGC 1 cut(s) 390
BpiI GAAGAC 1 cut(s) 418
Bpu14I TTCGAA 1 cut(s) 251
BpuEI CTTGAG 1 cut(s) 1397
BpuMI CCSGG 2 cut(s) 328, 417
BsaJI CCNNGG 5 cut(s) 15, 595, 793, 1265, 1443
Bsc4I CCNNNNNNNGG 4 cut(s) 326, 333, 1177, 1266
Bse1I ACTGG 3 cut(s) 777, 841, 980
Bse3DI GCAATG 3 cut(s) 172, 189, 1385
BseBI CCWGG 2 cut(s) 383, 1494
BseDI CCNNGG 5 cut(s) 15, 595, 793, 1265, 1443
BseGI GGATG 2 cut(s) 1101, 1260
BseLI CCNNNNNNNGG 4 cut(s) 326, 333, 1177, 1266
BseMI GCAATG 3 cut(s) 172, 189, 1385
BseMII CTCAG 1 cut(s) 387
BseNI ACTGG 3 cut(s) 777, 841, 980
BseRI GAGGAG 2 cut(s) 236, 275
BseSI GKGCMC 2 cut(s) 630, 1385
BseXI GCAGC 9 cut(s) 111, 391, 535, 665, 854, 862, 1051, 1182, 1484
BseYI CCCAGC 1 cut(s) 623
BsgI GTGCAG 2 cut(s) 861, 1116
Bsh1236I CGCG 1 cut(s) 127
BshFI GGCC 8 cut(s) 323, 346, 381, 628, 691, 792, 1010, 1187
BsiHKAI GWGCWC 1 cut(s) 1453
BsiHKCI CYCGRG 1 cut(s) 1148
BsiSI CCGG 3 cut(s) 320, 327, 416
BslFI GGGAC 2 cut(s) 426, 765
BslI CCNNNNNNNGG 4 cut(s) 326, 333, 1177, 1266
BsmAI GTCTC 1 cut(s) 362
BsmFI GGGAC 2 cut(s) 426, 765
BsmI GAATGC 1 cut(s) 1197
BsnI GGCC 8 cut(s) 323, 346, 381, 628, 691, 792, 1010, 1187
BsoBI CYCGRG 1 cut(s) 1148
Bsp119I TTCGAA 1 cut(s) 251
Bsp120I GGGCCC 1 cut(s) 626
Bsp1286I GDGCHC 5 cut(s) 630, 1385, 1453, 1531, 1598
Bsp1407I TGTACA 1 cut(s) 81
Bsp143I GATC 3 cut(s) 1080, 1402, 1588
Bsp19I CCATGG 1 cut(s) 15
BspACI CCGC 4 cut(s) 97, 125, 198, 369
BspANI GGCC 8 cut(s) 323, 346, 381, 628, 691, 792, 1010, 1187
BspCNI CTCAG 1 cut(s) 388
BspFNI CGCG 1 cut(s) 127
BspHI TCATGA 1 cut(s) 1077
BspLI GGNNCC 4 cut(s) 318, 414, 628, 753
BspMAI CTGCAG 2 cut(s) 525, 655
BspMI ACCTGC 3 cut(s) 280, 658, 965
BspOI GCTAGC 1 cut(s) 390
BspPI GGATC 1 cut(s) 1075
BspQI GCTCTTC 2 cut(s) 551, 1458
BspT104I TTCGAA 1 cut(s) 251
BsrDI GCAATG 3 cut(s) 172, 189, 1385
BsrGI TGTACA 1 cut(s) 81
BsrI ACTGG 3 cut(s) 777, 841, 980
BssECI CCNNGG 5 cut(s) 15, 595, 793, 1265, 1443
BssMI GATC 3 cut(s) 1080, 1402, 1588
BssSI CACGAG 1 cut(s) 945
BssT1I CCWWGG 5 cut(s) 15, 595, 793, 1265, 1443
Bst2BI CACGAG 1 cut(s) 945
Bst2UI CCWGG 2 cut(s) 383, 1494
Bst4CI ACNGT 3 cut(s) 424, 934, 1461
Bst6I CTCTTC 3 cut(s) 213, 551, 1458
BstAPI GCANNNNNTGC 1 cut(s) 692
BstAUI TGTACA 1 cut(s) 81
BstBI TTCGAA 1 cut(s) 251
BstDEI CTNAG 1 cut(s) 396
BstDSI CCRYGG 1 cut(s) 15
BstF5I GGATG 2 cut(s) 1101, 1260
BstFNI CGCG 1 cut(s) 127
BstH2I RGCGCY 3 cut(s) 23, 61, 611
BstHHI GCGC 6 cut(s) 22, 60, 496, 610, 725, 1510
BstKTI GATC 3 cut(s) 1083, 1405, 1591
BstMAI GTCTC 1 cut(s) 362
BstMBI GATC 3 cut(s) 1080, 1402, 1588
BstNI CCWGG 2 cut(s) 383, 1494
BstNSI RCATGY 2 cut(s) 820, 1576
BstSCI CCNGG 4 cut(s) 326, 381, 415, 1492
BstSFI CTRYAG 2 cut(s) 521, 651
BstSLI GKGCMC 2 cut(s) 630, 1385
BstUI CGCG 1 cut(s) 127
BstV1I GCAGC 9 cut(s) 111, 391, 535, 665, 854, 862, 1051, 1182, 1484
BstV2I GAAGAC 1 cut(s) 418
BstX2I RGATCY 1 cut(s) 1588
BstXI CCANNNNNNTGG 1 cut(s) 1500
BstYI RGATCY 1 cut(s) 1588
BsuRI GGCC 8 cut(s) 323, 346, 381, 628, 691, 792, 1010, 1187
BtgI CCRYGG 1 cut(s) 15
BtgZI GCGATG 2 cut(s) 846, 924
BtrI CACGTC 1 cut(s) 1400
BtsCI GGATG 2 cut(s) 1101, 1260
BtsI GCAGTG 1 cut(s) 489
BtsIMutI CAGTG 5 cut(s) 489, 784, 930, 987, 1019
BveI ACCTGC 3 cut(s) 280, 658, 965
CciI TCATGA 1 cut(s) 1077
CfoI GCGC 6 cut(s) 22, 60, 496, 610, 725, 1510
Cfr13I GGNCC 8 cut(s) 317, 344, 413, 626, 627, 752, 977, 1186
CseI GACGC 1 cut(s) 218
Csp6I GTAC 5 cut(s) 82, 1050, 1090, 1159, 1365
CspCI CAANNNNNGTGG 2 cut(s) 478, 513
CviQI GTAC 5 cut(s) 82, 1050, 1090, 1159, 1365
DdeI CTNAG 1 cut(s) 396
DpnI GATC 3 cut(s) 1082, 1404, 1590
DpnII GATC 3 cut(s) 1080, 1402, 1588
DraI TTTAAA 1 cut(s) 759
DrdI GACNNNNNNGTC 1 cut(s) 1301
DseDI GACNNNNNNGTC 1 cut(s) 1301
EaeI YGGCCR 2 cut(s) 321, 379
Eam1104I CTCTTC 3 cut(s) 213, 551, 1458
EarI CTCTTC 3 cut(s) 213, 551, 1458
Eco130I CCWWGG 5 cut(s) 15, 595, 793, 1265, 1443
Eco24I GRGCYC 3 cut(s) 630, 1531, 1598
Eco32I GATATC 1 cut(s) 534
Eco47I GGWCC 4 cut(s) 317, 413, 752, 977
Eco47III AGCGCT 1 cut(s) 59
Eco88I CYCGRG 1 cut(s) 1148
EcoO109I RGGNCCY 1 cut(s) 752
EcoRII CCWGG 2 cut(s) 381, 1492
EcoRV GATATC 1 cut(s) 534
EcoT14I CCWWGG 5 cut(s) 15, 595, 793, 1265, 1443
EcoT38I GRGCYC 3 cut(s) 630, 1531, 1598
ErhI CCWWGG 5 cut(s) 15, 595, 793, 1265, 1443
FalI AAGNNNNNCTT 2 cut(s) 995, 1027
FaqI GGGAC 2 cut(s) 426, 765
FokI GGATG 2 cut(s) 1108, 1267
FriOI GRGCYC 3 cut(s) 630, 1531, 1598
FspBI CTAG 1 cut(s) 387
GlaI GCGC 6 cut(s) 21, 59, 495, 609, 724, 1509
GsaI CCCAGC 1 cut(s) 627
HaeII RGCGCY 3 cut(s) 23, 61, 611
HaeIII GGCC 8 cut(s) 323, 346, 381, 628, 691, 792, 1010, 1187
HapII CCGG 3 cut(s) 320, 327, 416
HgaI GACGC 1 cut(s) 218
HhaI GCGC 6 cut(s) 22, 60, 496, 610, 725, 1510
Hin6I GCGC 6 cut(s) 20, 58, 494, 608, 723, 1508
HinP1I GCGC 6 cut(s) 20, 58, 494, 608, 723, 1508
HincII GTYRAC 1 cut(s) 1168
HindII GTYRAC 1 cut(s) 1168
HinfI GANTC 6 cut(s) 4, 355, 442, 673, 697, 743
HpaI GTTAAC 1 cut(s) 1168
HpaII CCGG 3 cut(s) 320, 327, 416
HphI GGTGA 5 cut(s) 32, 59, 86, 304, 1124
Hpy166II GTNNAC 3 cut(s) 585, 1168, 1471
Hpy188I TCNGA 7 cut(s) 9, 531, 573, 672, 900, 1550, 1585
Hpy188III TCNNGA 2 cut(s) 947, 1078
Hpy8I GTNNAC 3 cut(s) 585, 1168, 1471
Hpy99I CGWCG 1 cut(s) 1554
HpyAV CCTTC 6 cut(s) 81, 250, 289, 1021, 1177, 1420
HpyCH4III ACNGT 3 cut(s) 424, 934, 1461
HpyCH4IV ACGT 1 cut(s) 1399
HpyF3I CTNAG 1 cut(s) 396
HpySE526I ACGT 1 cut(s) 1399
HspAI GCGC 6 cut(s) 20, 58, 494, 608, 723, 1508
KspAI GTTAAC 1 cut(s) 1168
Kzo9I GATC 3 cut(s) 1080, 1402, 1588
LguI GCTCTTC 2 cut(s) 551, 1458
LmnI GCTCC 5 cut(s) 27, 223, 271, 1220, 1581
Lsp1109I GCAGC 9 cut(s) 111, 391, 535, 665, 854, 862, 1051, 1182, 1484
LweI GCATC 4 cut(s) 535, 564, 869, 1305
MaeI CTAG 1 cut(s) 387
MaeII ACGT 1 cut(s) 1399
MaeIII GTNAC 4 cut(s) 110, 819, 988, 1203
MalI GATC 3 cut(s) 1082, 1404, 1590
MboI GATC 3 cut(s) 1080, 1402, 1588
MboII GAAGA 7 cut(s) 230, 265, 418, 538, 1330, 1445, 1598
MflI RGATCY 1 cut(s) 1588
MhlI GDGCHC 5 cut(s) 630, 1385, 1453, 1531, 1598
MluCI AATT 2 cut(s) 590, 1212
MlyI GAGTC 1 cut(s) 364
MmeI TCCRAC 2 cut(s) 532, 1573
MnlI CCTC 8 cut(s) 53, 214, 232, 253, 954, 1128, 1372, 1472
MseI TTAA 4 cut(s) 120, 758, 1167, 1627
MslI CAYNNNNRTG 1 cut(s) 305
MspA1I CMGCKG 1 cut(s) 371
MspI CCGG 3 cut(s) 320, 327, 416
MspR9I CCNGG 4 cut(s) 328, 383, 417, 1494
Mva1269I GAATGC 1 cut(s) 1197
MvaI CCWGG 2 cut(s) 383, 1494
MvnI CGCG 1 cut(s) 127
NciI CCSGG 2 cut(s) 328, 417
NcoI CCATGG 1 cut(s) 15
NdeII GATC 3 cut(s) 1080, 1402, 1588
NheI GCTAGC 1 cut(s) 386
NlaIV GGNNCC 4 cut(s) 318, 414, 628, 753
NmuCI GTSAC 1 cut(s) 1203
NspI RCATGY 2 cut(s) 820, 1576
NspV TTCGAA 1 cut(s) 251
PaeI GCATGC 1 cut(s) 1576
PagI TCATGA 1 cut(s) 1077
PaqCI CACCTGC 1 cut(s) 280
PciI ACATGT 1 cut(s) 816
PciSI GCTCTTC 2 cut(s) 551, 1458
PcsI WCGNNNNNNNCGW 1 cut(s) 1098
PctI GAATGC 1 cut(s) 1197
PfeI GAWTC 5 cut(s) 4, 442, 673, 697, 743
PflFI GACNNNGTC 1 cut(s) 302
PleI GAGTC 1 cut(s) 363
PpsI GAGTC 1 cut(s) 363
PpuMI RGGWCCY 1 cut(s) 752
PscI ACATGT 1 cut(s) 816
Psp5II RGGWCCY 1 cut(s) 752
Psp6I CCWGG 2 cut(s) 381, 1492
PspFI CCCAGC 1 cut(s) 623
PspGI CCWGG 2 cut(s) 381, 1492
PspN4I GGNNCC 4 cut(s) 318, 414, 628, 753
PspOMI GGGCCC 1 cut(s) 626
PspPI GGNCC 8 cut(s) 317, 344, 413, 626, 627, 752, 977, 1186
PspPPI RGGWCCY 1 cut(s) 752
PstI CTGCAG 2 cut(s) 525, 655
PsuI RGATCY 1 cut(s) 1588
PsyI GACNNNGTC 1 cut(s) 302
RsaI GTAC 5 cut(s) 83, 1051, 1091, 1160, 1366
RsaNI GTAC 5 cut(s) 82, 1050, 1090, 1159, 1365
RseI CAYNNNNRTG 1 cut(s) 305
SapI GCTCTTC 2 cut(s) 551, 1458
SaqAI TTAA 4 cut(s) 120, 758, 1167, 1627
Sau3AI GATC 3 cut(s) 1080, 1402, 1588
Sau96I GGNCC 8 cut(s) 317, 344, 413, 626, 627, 752, 977, 1186
SchI GAGTC 1 cut(s) 364
ScrFI CCNGG 4 cut(s) 328, 383, 417, 1494
SduI GDGCHC 5 cut(s) 630, 1385, 1453, 1531, 1598
SfaNI GCATC 4 cut(s) 535, 564, 869, 1305
SfcI CTRYAG 2 cut(s) 521, 651
SfuI TTCGAA 1 cut(s) 251
SinI GGWCC 4 cut(s) 317, 413, 752, 977
SmiMI CAYNNNNRTG 1 cut(s) 305
SmlI CTYRAG 1 cut(s) 1376
SmoI CTYRAG 1 cut(s) 1376
SphI GCATGC 1 cut(s) 1576
Sse9I AATT 2 cut(s) 590, 1212
SsiI CCGC 4 cut(s) 97, 125, 198, 369
SspI AATATT 1 cut(s) 963
SspMI CTAG 1 cut(s) 387
StyD4I CCNGG 4 cut(s) 326, 381, 415, 1492
StyI CCWWGG 5 cut(s) 15, 595, 793, 1265, 1443
TaaI ACNGT 3 cut(s) 424, 934, 1461
TaiI ACGT 1 cut(s) 1402
TaqI TCGA 3 cut(s) 251, 464, 1531
TasI AATT 2 cut(s) 590, 1212
TatI WGTACW 2 cut(s) 81, 1364
TauI GCSGC 1 cut(s) 127
TfiI GAWTC 5 cut(s) 4, 442, 673, 697, 743
Tru1I TTAA 4 cut(s) 120, 758, 1167, 1627
Tru9I TTAA 4 cut(s) 120, 758, 1167, 1627
TscAI CASTG 5 cut(s) 496, 784, 937, 987, 1026
TseFI GTSAC 1 cut(s) 1203
TseI GCWGC 9 cut(s) 99, 404, 523, 653, 842, 875, 1064, 1195, 1497
Tsp45I GTSAC 1 cut(s) 1203
TspDTI ATGAA 7 cut(s) 17, 442, 455, 591, 735, 752, 1402
TspGWI ACGGA 2 cut(s) 1176, 1249
TspRI CASTG 5 cut(s) 496, 784, 937, 987, 1026
Tth111I GACNNNGTC 1 cut(s) 302
VpaK11BI GGWCC 4 cut(s) 317, 413, 752, 977
XceI RCATGY 2 cut(s) 820, 1576
XspI CTAG 1 cut(s) 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.