Gibberellin 3-beta-dioxygenase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0418431 |
| rosa_multiflora | Rmu_co8108702.1_g000001 Rmu_sc0001266.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00361660 |
| rosa_rugosa | Rorug04G0153000 |
| rosa_samantha | Rh4BG216000 Rh5CG319300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 187 |
| AcuI | CTGAAG | 2 cut(s) | 134, 152 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 21 |
| AjnI | CCWGG | 1 cut(s) | 195 |
| AluBI | AGCT | 1 cut(s) | 272 |
| AluI | AGCT | 1 cut(s) | 272 |
| AlwI | GGATC | 1 cut(s) | 187 |
| AoxI | GGCC | 2 cut(s) | 12, 71 |
| AspS9I | GGNCC | 1 cut(s) | 24 |
| AsuII | TTCGAA | 1 cut(s) | 245 |
| AvaII | GGWCC | 1 cut(s) | 24 |
| BanII | GRGCYC | 1 cut(s) | 267 |
| BceAI | ACGGC | 1 cut(s) | 233 |
| BciT130I | CCWGG | 1 cut(s) | 197 |
| Bme1390I | CCNGG | 1 cut(s) | 197 |
| Bme18I | GGWCC | 1 cut(s) | 24 |
| BmgT120I | GGNCC | 1 cut(s) | 24 |
| BmiI | GGNNCC | 1 cut(s) | 26 |
| BmrFI | CCNGG | 1 cut(s) | 197 |
| BpmI | CTGGAG | 3 cut(s) | 143, 194, 218 |
| Bpu14I | TTCGAA | 1 cut(s) | 245 |
| BpuEI | CTTGAG | 1 cut(s) | 37 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 21 |
| Bse1I | ACTGG | 2 cut(s) | 88, 126 |
| BseBI | CCWGG | 1 cut(s) | 197 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 21 |
| BseNI | ACTGG | 2 cut(s) | 88, 126 |
| BseRI | GAGGAG | 1 cut(s) | 34 |
| BshFI | GGCC | 2 cut(s) | 14, 73 |
| BslFI | GGGAC | 1 cut(s) | 10 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 21 |
| BsmFI | GGGAC | 1 cut(s) | 10 |
| BsnI | GGCC | 2 cut(s) | 14, 73 |
| Bsp119I | TTCGAA | 1 cut(s) | 245 |
| Bsp1286I | GDGCHC | 1 cut(s) | 267 |
| Bsp143I | GATC | 1 cut(s) | 192 |
| BspANI | GGCC | 2 cut(s) | 14, 73 |
| BspHI | TCATGA | 1 cut(s) | 82 |
| BspLI | GGNNCC | 1 cut(s) | 26 |
| BspPI | GGATC | 1 cut(s) | 187 |
| BspT104I | TTCGAA | 1 cut(s) | 245 |
| BsrI | ACTGG | 2 cut(s) | 88, 126 |
| BssMI | GATC | 1 cut(s) | 192 |
| Bst2UI | CCWGG | 1 cut(s) | 197 |
| Bst4CI | ACNGT | 2 cut(s) | 80, 100 |
| BstBI | TTCGAA | 1 cut(s) | 245 |
| BstDEI | CTNAG | 1 cut(s) | 204 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 19 |
| BstKTI | GATC | 1 cut(s) | 195 |
| BstMBI | GATC | 1 cut(s) | 192 |
| BstNI | CCWGG | 1 cut(s) | 197 |
| BstNSI | RCATGY | 1 cut(s) | 235 |
| BstSCI | CCNGG | 1 cut(s) | 195 |
| BsuRI | GGCC | 2 cut(s) | 14, 73 |
| BtsI | GCAGTG | 1 cut(s) | 209 |
| BtsIMutI | CAGTG | 3 cut(s) | 96, 209, 276 |
| CciI | TCATGA | 1 cut(s) | 82 |
| Cfr13I | GGNCC | 1 cut(s) | 24 |
| CviAII | CATG | 3 cut(s) | 34, 83, 232 |
| CviJI | RGCY | 5 cut(s) | 14, 73, 220, 265, 272 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 73, 220, 265, 272 |
| DdeI | CTNAG | 1 cut(s) | 204 |
| DpnI | GATC | 1 cut(s) | 194 |
| DpnII | GATC | 1 cut(s) | 192 |
| Eco24I | GRGCYC | 1 cut(s) | 267 |
| Eco47I | GGWCC | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 2 cut(s) | 134, 152 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 19 |
| EcoO109I | RGGNCCY | 1 cut(s) | 24 |
| EcoRII | CCWGG | 1 cut(s) | 195 |
| EcoT38I | GRGCYC | 1 cut(s) | 267 |
| FaeI | CATG | 3 cut(s) | 37, 86, 235 |
| FaiI | YATR | 7 cut(s) | 35, 39, 84, 110, 140, 168, 233 |
| FaqI | GGGAC | 1 cut(s) | 10 |
| FatI | CATG | 3 cut(s) | 33, 82, 231 |
| FriOI | GRGCYC | 1 cut(s) | 267 |
| GsuI | CTGGAG | 3 cut(s) | 143, 194, 218 |
| HaeIII | GGCC | 2 cut(s) | 14, 73 |
| Hin1II | CATG | 3 cut(s) | 37, 86, 235 |
| HinfI | GANTC | 3 cut(s) | 41, 154, 200 |
| Hpy188III | TCNNGA | 3 cut(s) | 83, 158, 173 |
| HpyAV | CCTTC | 3 cut(s) | 127, 241, 252 |
| HpyCH4III | ACNGT | 2 cut(s) | 80, 100 |
| HpyCH4V | TGCA | 1 cut(s) | 96 |
| HpyF3I | CTNAG | 1 cut(s) | 204 |
| Hsp92II | CATG | 3 cut(s) | 37, 86, 235 |
| Kzo9I | GATC | 1 cut(s) | 192 |
| LpnPI | CCDG | 7 cut(s) | 41, 101, 107, 158, 182, 209, 246 |
| MalI | GATC | 1 cut(s) | 194 |
| MboI | GATC | 1 cut(s) | 192 |
| MboII | GAAGA | 1 cut(s) | 74 |
| MhlI | GDGCHC | 1 cut(s) | 267 |
| MluCI | AATT | 1 cut(s) | 102 |
| MlyI | GAGTC | 1 cut(s) | 209 |
| MnlI | CCTC | 5 cut(s) | 12, 15, 118, 169, 249 |
| MseI | TTAA | 2 cut(s) | 48, 144 |
| MspR9I | CCNGG | 1 cut(s) | 197 |
| MvaI | CCWGG | 1 cut(s) | 197 |
| NdeII | GATC | 1 cut(s) | 192 |
| NlaIII | CATG | 3 cut(s) | 37, 86, 235 |
| NlaIV | GGNNCC | 1 cut(s) | 26 |
| NspI | RCATGY | 1 cut(s) | 235 |
| NspV | TTCGAA | 1 cut(s) | 245 |
| PagI | TCATGA | 1 cut(s) | 82 |
| PfeI | GAWTC | 2 cut(s) | 41, 154 |
| PfoI | TCCNGGA | 1 cut(s) | 195 |
| PleI | GAGTC | 1 cut(s) | 208 |
| PpsI | GAGTC | 1 cut(s) | 208 |
| PpuMI | RGGWCCY | 1 cut(s) | 24 |
| Psp5II | RGGWCCY | 1 cut(s) | 24 |
| Psp6I | CCWGG | 1 cut(s) | 195 |
| PspGI | CCWGG | 1 cut(s) | 195 |
| PspN4I | GGNNCC | 1 cut(s) | 26 |
| PspPI | GGNCC | 1 cut(s) | 24 |
| PspPPI | RGGWCCY | 1 cut(s) | 24 |
| SaqAI | TTAA | 2 cut(s) | 48, 144 |
| Sau3AI | GATC | 1 cut(s) | 192 |
| Sau96I | GGNCC | 1 cut(s) | 24 |
| SchI | GAGTC | 1 cut(s) | 209 |
| ScrFI | CCNGG | 1 cut(s) | 197 |
| SduI | GDGCHC | 1 cut(s) | 267 |
| SetI | ASST | 3 cut(s) | 26, 241, 274 |
| SfuI | TTCGAA | 1 cut(s) | 245 |
| SinI | GGWCC | 1 cut(s) | 24 |
| SmlI | CTYRAG | 1 cut(s) | 16 |
| SmoI | CTYRAG | 1 cut(s) | 16 |
| Sse9I | AATT | 1 cut(s) | 102 |
| StyD4I | CCNGG | 1 cut(s) | 195 |
| TaaI | ACNGT | 2 cut(s) | 80, 100 |
| TaqI | TCGA | 2 cut(s) | 191, 245 |
| TasI | AATT | 1 cut(s) | 102 |
| TfiI | GAWTC | 2 cut(s) | 41, 154 |
| Tru1I | TTAA | 2 cut(s) | 48, 144 |
| Tru9I | TTAA | 2 cut(s) | 48, 144 |
| TscAI | CASTG | 3 cut(s) | 103, 216, 283 |
| TspDTI | ATGAA | 2 cut(s) | 54, 239 |
| TspRI | CASTG | 3 cut(s) | 103, 216, 283 |
| VpaK11BI | GGWCC | 1 cut(s) | 24 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 19 |
| XceI | RCATGY | 1 cut(s) | 235 |