Gibberellin 3-beta-dioxygenase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0418431 |
| rosa_multiflora | Rmu_co8108702.1_g000001 Rmu_sc0001266.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00361660 |
| rosa_rugosa | Rorug04G0153000 |
| rosa_samantha | Rh4BG216000 Rh5CG319300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 444 |
| AclWI | GGATC | 1 cut(s) | 329 |
| AcsI | RAATTY | 2 cut(s) | 550, 584 |
| AdeI | CACNNNGTG | 1 cut(s) | 16 |
| AfaI | GTAC | 1 cut(s) | 359 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 107 |
| AflIII | ACRYGT | 1 cut(s) | 501 |
| AgsI | TTSAA | 6 cut(s) | 251, 397, 413, 584, 589, 622 |
| AluBI | AGCT | 2 cut(s) | 7, 88 |
| AluI | AGCT | 2 cut(s) | 7, 88 |
| Alw21I | GWGCWC | 1 cut(s) | 346 |
| Alw26I | GTCTC | 2 cut(s) | 140, 410 |
| Alw44I | GTGCAC | 1 cut(s) | 342 |
| AlwI | GGATC | 1 cut(s) | 329 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 437 |
| ApaLI | GTGCAC | 1 cut(s) | 342 |
| ApeKI | GCWGC | 2 cut(s) | 7, 178 |
| ApoI | RAATTY | 2 cut(s) | 550, 584 |
| BaeGI | GKGCMC | 1 cut(s) | 346 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 41, 73 |
| BbsI | GAAGAC | 2 cut(s) | 60, 206 |
| Bbv12I | GWGCWC | 1 cut(s) | 346 |
| BbvI | GCAGC | 1 cut(s) | 190 |
| BccI | CCATC | 2 cut(s) | 551, 568 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 106, 140 |
| BcoDI | GTCTC | 2 cut(s) | 140, 410 |
| BfaI | CTAG | 1 cut(s) | 102 |
| BfuAI | ACCTGC | 1 cut(s) | 444 |
| BisI | GCNGC | 2 cut(s) | 8, 179 |
| BlsI | GCNGC | 2 cut(s) | 9, 180 |
| BpiI | GAAGAC | 2 cut(s) | 60, 206 |
| BpuEI | CTTGAG | 1 cut(s) | 144 |
| BsaBI | GATNNNNATC | 1 cut(s) | 333 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 107 |
| Bse8I | GATNNNNATC | 1 cut(s) | 333 |
| BseGI | GGATG | 4 cut(s) | 247, 322, 382, 472 |
| BseJI | GATNNNNATC | 1 cut(s) | 333 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 107 |
| BseRI | GAGGAG | 2 cut(s) | 158, 368 |
| BseSI | GKGCMC | 1 cut(s) | 346 |
| BseXI | GCAGC | 1 cut(s) | 190 |
| BsiHKAI | GWGCWC | 1 cut(s) | 346 |
| BslFI | GGGAC | 1 cut(s) | 591 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 107 |
| BsmAI | GTCTC | 2 cut(s) | 140, 410 |
| BsmFI | GGGAC | 1 cut(s) | 591 |
| BsmI | GAATGC | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 1 cut(s) | 346 |
| Bsp143I | GATC | 1 cut(s) | 334 |
| BspMI | ACCTGC | 1 cut(s) | 444 |
| BspPI | GGATC | 1 cut(s) | 329 |
| BssMI | GATC | 1 cut(s) | 334 |
| Bst4CI | ACNGT | 1 cut(s) | 14 |
| Bst6I | CTCTTC | 4 cut(s) | 408, 489, 522, 564 |
| BstC8I | GCNNGC | 1 cut(s) | 166 |
| BstF5I | GGATG | 4 cut(s) | 247, 322, 382, 472 |
| BstKTI | GATC | 1 cut(s) | 337 |
| BstMAI | GTCTC | 2 cut(s) | 140, 410 |
| BstMBI | GATC | 1 cut(s) | 334 |
| BstNSI | RCATGY | 1 cut(s) | 505 |
| BstSLI | GKGCMC | 1 cut(s) | 346 |
| BstV1I | GCAGC | 1 cut(s) | 190 |
| BstV2I | GAAGAC | 2 cut(s) | 60, 206 |
| BtsCI | GGATG | 4 cut(s) | 247, 322, 382, 472 |
| BtsIMutI | CAGTG | 1 cut(s) | 19 |
| BveI | ACCTGC | 1 cut(s) | 444 |
| Cac8I | GCNNGC | 1 cut(s) | 166 |
| CaiI | CAGNNNCTG | 1 cut(s) | 437 |
| Csp6I | GTAC | 1 cut(s) | 358 |
| CviAII | CATG | 4 cut(s) | 46, 296, 347, 502 |
| CviJI | RGCY | 2 cut(s) | 7, 88 |
| CviKI_1 | RGCY | 2 cut(s) | 7, 88 |
| CviQI | GTAC | 1 cut(s) | 358 |
| DpnI | GATC | 1 cut(s) | 336 |
| DpnII | GATC | 1 cut(s) | 334 |
| DraI | TTTAAA | 1 cut(s) | 477 |
| DraIII | CACNNNGTG | 1 cut(s) | 16 |
| Eam1104I | CTCTTC | 4 cut(s) | 408, 489, 522, 564 |
| EarI | CTCTTC | 4 cut(s) | 408, 489, 522, 564 |
| EcoRI | GAATTC | 1 cut(s) | 584 |
| FaeI | CATG | 4 cut(s) | 49, 299, 350, 505 |
| FaqI | GGGAC | 1 cut(s) | 591 |
| FatI | CATG | 4 cut(s) | 45, 295, 346, 501 |
| Fnu4HI | GCNGC | 2 cut(s) | 8, 179 |
| FokI | GGATG | 4 cut(s) | 254, 329, 389, 479 |
| Fsp4HI | GCNGC | 2 cut(s) | 8, 179 |
| FspBI | CTAG | 1 cut(s) | 102 |
| GluI | GCNGC | 2 cut(s) | 8, 179 |
| Hin1II | CATG | 4 cut(s) | 49, 299, 350, 505 |
| HinfI | GANTC | 5 cut(s) | 95, 123, 434, 518, 610 |
| Hpy166II | GTNNAC | 1 cut(s) | 344 |
| Hpy188I | TCNGA | 2 cut(s) | 523, 556 |
| Hpy188III | TCNNGA | 3 cut(s) | 127, 218, 266 |
| Hpy8I | GTNNAC | 1 cut(s) | 344 |
| HpyAV | CCTTC | 3 cut(s) | 65, 197, 293 |
| HpyCH4III | ACNGT | 1 cut(s) | 14 |
| HpyCH4V | TGCA | 3 cut(s) | 10, 344, 422 |
| Hsp92II | CATG | 4 cut(s) | 49, 299, 350, 505 |
| Kzo9I | GATC | 1 cut(s) | 334 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 6 cut(s) | 105, 251, 426, 439, 444, 627 |
| Lsp1109I | GCAGC | 1 cut(s) | 190 |
| MaeI | CTAG | 1 cut(s) | 102 |
| MalI | GATC | 1 cut(s) | 336 |
| MboI | GATC | 1 cut(s) | 334 |
| MhlI | GDGCHC | 1 cut(s) | 346 |
| MluCI | AATT | 2 cut(s) | 550, 584 |
| MnlI | CCTC | 8 cut(s) | 130, 136, 200, 274, 307, 313, 346, 490 |
| MseI | TTAA | 3 cut(s) | 66, 476, 627 |
| MslI | CAYNNNNRTG | 1 cut(s) | 44 |
| Mva1269I | GAATGC | 1 cut(s) | 290 |
| NdeII | GATC | 1 cut(s) | 334 |
| NlaIII | CATG | 4 cut(s) | 49, 299, 350, 505 |
| NspI | RCATGY | 1 cut(s) | 505 |
| PciI | ACATGT | 1 cut(s) | 501 |
| PctI | GAATGC | 1 cut(s) | 290 |
| PfeI | GAWTC | 5 cut(s) | 95, 123, 434, 518, 610 |
| PkrI | GCNGC | 2 cut(s) | 9, 180 |
| PscI | ACATGT | 1 cut(s) | 501 |
| PstNI | CAGNNNCTG | 1 cut(s) | 437 |
| RsaI | GTAC | 1 cut(s) | 359 |
| RsaNI | GTAC | 1 cut(s) | 358 |
| RseI | CAYNNNNRTG | 1 cut(s) | 44 |
| SaqAI | TTAA | 3 cut(s) | 66, 476, 627 |
| SatI | GCNGC | 2 cut(s) | 8, 179 |
| Sau3AI | GATC | 1 cut(s) | 334 |
| SduI | GDGCHC | 1 cut(s) | 346 |
| SetI | ASST | 8 cut(s) | 9, 76, 90, 94, 141, 157, 211, 458 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 44 |
| SmlI | CTYRAG | 1 cut(s) | 159 |
| SmoI | CTYRAG | 1 cut(s) | 159 |
| Sse9I | AATT | 2 cut(s) | 550, 584 |
| SspMI | CTAG | 1 cut(s) | 102 |
| TaaI | ACNGT | 1 cut(s) | 14 |
| TasI | AATT | 2 cut(s) | 550, 584 |
| TfiI | GAWTC | 5 cut(s) | 95, 123, 434, 518, 610 |
| Tru1I | TTAA | 3 cut(s) | 66, 476, 627 |
| Tru9I | TTAA | 3 cut(s) | 66, 476, 627 |
| TscAI | CASTG | 1 cut(s) | 19 |
| TseI | GCWGC | 2 cut(s) | 7, 178 |
| TspRI | CASTG | 1 cut(s) | 19 |
| VneI | GTGCAC | 1 cut(s) | 342 |
| XapI | RAATTY | 2 cut(s) | 550, 584 |
| XceI | RCATGY | 1 cut(s) | 505 |
| XspI | CTAG | 1 cut(s) | 102 |