zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G26749 AT5G26749 |
| fragaria_vesca | FvH4_6g08160 FvH4_6g08160 FvH4_6g08160 FvH4_6g08160 |
| malus_domestica | MD12G1202300.v1.1 |
| prunus_persica | Prupe.6G307100_v2.0.a1 |
| pyrus_communis | pycom12g18890 |
| rosa_chinensis | RchiOBHm_Chr3g0458031 |
| rosa_laevigata | RLG00000025178 |
| rosa_multiflora | Rmu_sc0000384.1_g000012 |
| rosa_roxburghii | Rroxscaffold_6G00421340 |
| rosa_rugosa | Rorug03G0024400 Rorug03G0024400 Rorug03G0024500 |
| rosa_samantha | Rh3AG084900 Rh3BG087700 Rh3CG088200 Rh3DG088600 |
| rosa_wichuraiana | Rw0G012410 Rw3G007230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 409 |
| AciI | CCGC | 2 cut(s) | 178, 428 |
| AclWI | GGATC | 1 cut(s) | 125 |
| AcuI | CTGAAG | 1 cut(s) | 62 |
| AcyI | GRCGYC | 1 cut(s) | 70 |
| AfaI | GTAC | 2 cut(s) | 17, 116 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 208, 413, 416 |
| AgsI | TTSAA | 3 cut(s) | 127, 300, 308 |
| AluBI | AGCT | 2 cut(s) | 107, 156 |
| AluI | AGCT | 2 cut(s) | 107, 156 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AlwI | GGATC | 1 cut(s) | 125 |
| Aor13HI | TCCGGA | 1 cut(s) | 409 |
| ApeKI | GCWGC | 2 cut(s) | 323, 330 |
| AsuHPI | GGTGA | 1 cut(s) | 221 |
| BbsI | GAAGAC | 1 cut(s) | 288 |
| BbvI | GCAGC | 2 cut(s) | 310, 317 |
| BccI | CCATC | 2 cut(s) | 81, 400 |
| BceAI | ACGGC | 1 cut(s) | 336 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BfmI | CTRYAG | 1 cut(s) | 324 |
| BisI | GCNGC | 2 cut(s) | 324, 331 |
| BlsI | GCNGC | 2 cut(s) | 325, 332 |
| BmsI | GCATC | 3 cut(s) | 130, 202, 278 |
| BpiI | GAAGAC | 1 cut(s) | 288 |
| BpuEI | CTTGAG | 1 cut(s) | 246 |
| BsaHI | GRCGYC | 1 cut(s) | 70 |
| BsaWI | WCCGGW | 1 cut(s) | 409 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 208, 413, 416 |
| Bse1I | ACTGG | 1 cut(s) | 449 |
| BseAI | TCCGGA | 1 cut(s) | 409 |
| BseGI | GGATG | 1 cut(s) | 217 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 208, 413, 416 |
| BseNI | ACTGG | 1 cut(s) | 449 |
| BseRI | GAGGAG | 1 cut(s) | 396 |
| BseXI | GCAGC | 2 cut(s) | 310, 317 |
| Bsh1285I | CGRYCG | 1 cut(s) | 64 |
| BsiEI | CGRYCG | 1 cut(s) | 64 |
| BsiSI | CCGG | 1 cut(s) | 410 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 208, 413, 416 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| BsmBI | CGTCTC | 1 cut(s) | 61 |
| Bsp13I | TCCGGA | 1 cut(s) | 409 |
| Bsp143I | GATC | 1 cut(s) | 130 |
| BspACI | CCGC | 2 cut(s) | 178, 428 |
| BspEI | TCCGGA | 1 cut(s) | 409 |
| BspMAI | CTGCAG | 1 cut(s) | 328 |
| BspPI | GGATC | 1 cut(s) | 125 |
| BsrI | ACTGG | 1 cut(s) | 449 |
| BssMI | GATC | 1 cut(s) | 130 |
| BssNI | GRCGYC | 1 cut(s) | 70 |
| Bst4CI | ACNGT | 1 cut(s) | 62 |
| Bst6I | CTCTTC | 1 cut(s) | 157 |
| BstACI | GRCGYC | 1 cut(s) | 70 |
| BstC8I | GCNNGC | 1 cut(s) | 328 |
| BstF5I | GGATG | 1 cut(s) | 217 |
| BstKTI | GATC | 1 cut(s) | 133 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstMBI | GATC | 1 cut(s) | 130 |
| BstMCI | CGRYCG | 1 cut(s) | 64 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 30 |
| BstSFI | CTRYAG | 1 cut(s) | 324 |
| BstV1I | GCAGC | 2 cut(s) | 310, 317 |
| BstV2I | GAAGAC | 1 cut(s) | 288 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| BtgZI | GCGATG | 1 cut(s) | 378 |
| BtsCI | GGATG | 1 cut(s) | 217 |
| Cac8I | GCNNGC | 1 cut(s) | 328 |
| CseI | GACGC | 1 cut(s) | 78 |
| Csp6I | GTAC | 2 cut(s) | 16, 115 |
| CviAII | CATG | 2 cut(s) | 364, 375 |
| CviJI | RGCY | 6 cut(s) | 84, 101, 107, 156, 323, 330 |
| CviKI_1 | RGCY | 6 cut(s) | 84, 101, 107, 156, 323, 330 |
| CviQI | GTAC | 2 cut(s) | 16, 115 |
| DpnI | GATC | 1 cut(s) | 132 |
| DpnII | GATC | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 157 |
| EarI | CTCTTC | 1 cut(s) | 157 |
| Eco32I | GATATC | 1 cut(s) | 422 |
| Eco57I | CTGAAG | 1 cut(s) | 62 |
| EcoRV | GATATC | 1 cut(s) | 422 |
| Esp3I | CGTCTC | 1 cut(s) | 61 |
| FaeI | CATG | 2 cut(s) | 367, 378 |
| FaiI | YATR | 5 cut(s) | 58, 147, 207, 365, 376 |
| FatI | CATG | 2 cut(s) | 363, 374 |
| Fnu4HI | GCNGC | 2 cut(s) | 324, 331 |
| FokI | GGATG | 1 cut(s) | 224 |
| Fsp4HI | GCNGC | 2 cut(s) | 324, 331 |
| GluI | GCNGC | 2 cut(s) | 324, 331 |
| HapII | CCGG | 1 cut(s) | 410 |
| HgaI | GACGC | 1 cut(s) | 78 |
| Hin1I | GRCGYC | 1 cut(s) | 70 |
| Hin1II | CATG | 2 cut(s) | 367, 378 |
| HindIII | AAGCTT | 1 cut(s) | 154 |
| HinfI | GANTC | 3 cut(s) | 119, 259, 313 |
| HpaII | CCGG | 1 cut(s) | 410 |
| HphI | GGTGA | 1 cut(s) | 221 |
| Hpy166II | GTNNAC | 1 cut(s) | 442 |
| Hpy188I | TCNGA | 3 cut(s) | 66, 81, 98 |
| Hpy188III | TCNNGA | 1 cut(s) | 410 |
| Hpy8I | GTNNAC | 1 cut(s) | 442 |
| HpyCH4III | ACNGT | 1 cut(s) | 62 |
| HpyCH4V | TGCA | 3 cut(s) | 149, 174, 326 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 30 |
| Hsp92I | GRCGYC | 1 cut(s) | 70 |
| Hsp92II | CATG | 2 cut(s) | 367, 378 |
| Kpn2I | TCCGGA | 1 cut(s) | 409 |
| Kzo9I | GATC | 1 cut(s) | 130 |
| LpnPI | CCDG | 5 cut(s) | 258, 312, 354, 423, 430 |
| Lsp1109I | GCAGC | 2 cut(s) | 310, 317 |
| LweI | GCATC | 3 cut(s) | 130, 202, 278 |
| MaeIII | GTNAC | 1 cut(s) | 277 |
| MalI | GATC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 130 |
| MboII | GAAGA | 3 cut(s) | 68, 174, 288 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MluCI | AATT | 1 cut(s) | 41 |
| MlyI | GAGTC | 2 cut(s) | 113, 253 |
| MmeI | TCCRAC | 2 cut(s) | 44, 112 |
| MnlI | CCTC | 8 cut(s) | 95, 104, 158, 399, 406, 414, 417, 435 |
| MroI | TCCGGA | 1 cut(s) | 409 |
| MslI | CAYNNNNRTG | 1 cut(s) | 368 |
| MspI | CCGG | 1 cut(s) | 410 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 30 |
| NdeII | GATC | 1 cut(s) | 130 |
| NlaIII | CATG | 2 cut(s) | 367, 378 |
| PfeI | GAWTC | 1 cut(s) | 313 |
| PkrI | GCNGC | 2 cut(s) | 325, 332 |
| PleI | GAGTC | 2 cut(s) | 113, 253 |
| PpsI | GAGTC | 2 cut(s) | 113, 253 |
| PstI | CTGCAG | 1 cut(s) | 328 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| RsaI | GTAC | 2 cut(s) | 17, 116 |
| RsaNI | GTAC | 2 cut(s) | 16, 115 |
| RseI | CAYNNNNRTG | 1 cut(s) | 368 |
| SatI | GCNGC | 2 cut(s) | 324, 331 |
| Sau3AI | GATC | 1 cut(s) | 130 |
| SchI | GAGTC | 2 cut(s) | 113, 253 |
| SetI | ASST | 5 cut(s) | 96, 109, 158, 277, 391 |
| SfaNI | GCATC | 3 cut(s) | 130, 202, 278 |
| SfcI | CTRYAG | 1 cut(s) | 324 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 368 |
| SmlI | CTYRAG | 1 cut(s) | 261 |
| SmoI | CTYRAG | 1 cut(s) | 261 |
| Sse9I | AATT | 1 cut(s) | 41 |
| SsiI | CCGC | 2 cut(s) | 178, 428 |
| TaaI | ACNGT | 1 cut(s) | 62 |
| TasI | AATT | 1 cut(s) | 41 |
| TfiI | GAWTC | 1 cut(s) | 313 |
| TseI | GCWGC | 2 cut(s) | 323, 330 |