zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G26749 AT5G26749 |
| fragaria_vesca | FvH4_6g08160 FvH4_6g08160 FvH4_6g08160 FvH4_6g08160 |
| malus_domestica | MD12G1202300.v1.1 |
| prunus_persica | Prupe.6G307100_v2.0.a1 |
| pyrus_communis | pycom12g18890 |
| rosa_chinensis | RchiOBHm_Chr3g0458031 |
| rosa_laevigata | RLG00000025178 |
| rosa_multiflora | Rmu_sc0000384.1_g000012 |
| rosa_roxburghii | Rroxscaffold_6G00421340 |
| rosa_rugosa | Rorug03G0024400 Rorug03G0024400 Rorug03G0024500 |
| rosa_samantha | Rh3AG084900 Rh3BG087700 Rh3CG088200 Rh3DG088600 |
| rosa_wichuraiana | Rw0G012410 Rw3G007230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 382 |
| AciI | CCGC | 2 cut(s) | 81, 401 |
| AcuI | CTGAAG | 1 cut(s) | 56 |
| AfaI | GTAC | 2 cut(s) | 5, 104 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 181, 386, 389 |
| AgsI | TTSAA | 2 cut(s) | 273, 281 |
| AluBI | AGCT | 4 cut(s) | 89, 118, 153, 306 |
| AluI | AGCT | 4 cut(s) | 89, 118, 153, 306 |
| Alw26I | GTCTC | 1 cut(s) | 59 |
| Aor13HI | TCCGGA | 1 cut(s) | 382 |
| ApeKI | GCWGC | 2 cut(s) | 296, 303 |
| AsuHPI | GGTGA | 1 cut(s) | 194 |
| BbsI | GAAGAC | 1 cut(s) | 261 |
| BbvI | GCAGC | 2 cut(s) | 283, 315 |
| BccI | CCATC | 1 cut(s) | 373 |
| BceAI | ACGGC | 3 cut(s) | 21, 121, 309 |
| BcoDI | GTCTC | 1 cut(s) | 59 |
| BfmI | CTRYAG | 1 cut(s) | 297 |
| BisI | GCNGC | 2 cut(s) | 297, 304 |
| BlsI | GCNGC | 2 cut(s) | 298, 305 |
| BmsI | GCATC | 3 cut(s) | 127, 175, 251 |
| BpiI | GAAGAC | 1 cut(s) | 261 |
| BpuEI | CTTGAG | 1 cut(s) | 219 |
| BsaWI | WCCGGW | 1 cut(s) | 382 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 181, 386, 389 |
| Bse1I | ACTGG | 1 cut(s) | 422 |
| BseAI | TCCGGA | 1 cut(s) | 382 |
| BseGI | GGATG | 2 cut(s) | 190, 322 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 181, 386, 389 |
| BseMII | CTCAG | 1 cut(s) | 42 |
| BseNI | ACTGG | 1 cut(s) | 422 |
| BseRI | GAGGAG | 1 cut(s) | 369 |
| BseXI | GCAGC | 2 cut(s) | 283, 315 |
| BsiSI | CCGG | 2 cut(s) | 314, 383 |
| BslFI | GGGAC | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 181, 386, 389 |
| BsmAI | GTCTC | 1 cut(s) | 59 |
| BsmFI | GGGAC | 1 cut(s) | 111 |
| Bsp13I | TCCGGA | 1 cut(s) | 382 |
| BspACI | CCGC | 2 cut(s) | 81, 401 |
| BspCNI | CTCAG | 1 cut(s) | 43 |
| BspEI | TCCGGA | 1 cut(s) | 382 |
| BspMAI | CTGCAG | 1 cut(s) | 301 |
| BsrI | ACTGG | 1 cut(s) | 422 |
| Bst4CI | ACNGT | 1 cut(s) | 102 |
| Bst6I | CTCTTC | 2 cut(s) | 75, 154 |
| BstC8I | GCNNGC | 1 cut(s) | 301 |
| BstDEI | CTNAG | 1 cut(s) | 51 |
| BstF5I | GGATG | 2 cut(s) | 190, 322 |
| BstMAI | GTCTC | 1 cut(s) | 59 |
| BstSFI | CTRYAG | 1 cut(s) | 297 |
| BstV1I | GCAGC | 2 cut(s) | 283, 315 |
| BstV2I | GAAGAC | 1 cut(s) | 261 |
| BtgZI | GCGATG | 1 cut(s) | 351 |
| BtsCI | GGATG | 2 cut(s) | 190, 322 |
| Cac8I | GCNNGC | 1 cut(s) | 301 |
| Csp6I | GTAC | 2 cut(s) | 4, 103 |
| CviAII | CATG | 2 cut(s) | 337, 348 |
| CviJI | RGCY | 6 cut(s) | 89, 108, 118, 153, 296, 306 |
| CviKI_1 | RGCY | 6 cut(s) | 89, 108, 118, 153, 296, 306 |
| CviQI | GTAC | 2 cut(s) | 4, 103 |
| DdeI | CTNAG | 1 cut(s) | 51 |
| Eam1104I | CTCTTC | 2 cut(s) | 75, 154 |
| EarI | CTCTTC | 2 cut(s) | 75, 154 |
| EciI | GGCGGA | 1 cut(s) | 70 |
| Eco32I | GATATC | 1 cut(s) | 395 |
| Eco57I | CTGAAG | 1 cut(s) | 56 |
| EcoRV | GATATC | 1 cut(s) | 395 |
| FaeI | CATG | 2 cut(s) | 340, 351 |
| FaiI | YATR | 4 cut(s) | 144, 180, 338, 349 |
| FaqI | GGGAC | 1 cut(s) | 111 |
| FatI | CATG | 2 cut(s) | 336, 347 |
| Fnu4HI | GCNGC | 2 cut(s) | 297, 304 |
| FokI | GGATG | 2 cut(s) | 197, 329 |
| Fsp4HI | GCNGC | 2 cut(s) | 297, 304 |
| GluI | GCNGC | 2 cut(s) | 297, 304 |
| HapII | CCGG | 2 cut(s) | 314, 383 |
| Hin1II | CATG | 2 cut(s) | 340, 351 |
| HindIII | AAGCTT | 1 cut(s) | 151 |
| HinfI | GANTC | 3 cut(s) | 67, 232, 286 |
| HpaII | CCGG | 2 cut(s) | 314, 383 |
| HphI | GGTGA | 1 cut(s) | 194 |
| Hpy166II | GTNNAC | 1 cut(s) | 415 |
| Hpy188I | TCNGA | 1 cut(s) | 64 |
| Hpy188III | TCNNGA | 1 cut(s) | 383 |
| Hpy8I | GTNNAC | 1 cut(s) | 415 |
| Hpy99I | CGWCG | 1 cut(s) | 42 |
| HpyCH4III | ACNGT | 1 cut(s) | 102 |
| HpyCH4V | TGCA | 2 cut(s) | 146, 299 |
| HpyF3I | CTNAG | 1 cut(s) | 51 |
| Hsp92II | CATG | 2 cut(s) | 340, 351 |
| Kpn2I | TCCGGA | 1 cut(s) | 382 |
| LpnPI | CCDG | 5 cut(s) | 231, 285, 327, 396, 403 |
| Lsp1109I | GCAGC | 2 cut(s) | 283, 315 |
| LweI | GCATC | 3 cut(s) | 127, 175, 251 |
| MaeIII | GTNAC | 1 cut(s) | 250 |
| MboII | GAAGA | 3 cut(s) | 62, 171, 261 |
| MluCI | AATT | 1 cut(s) | 21 |
| MlyI | GAGTC | 2 cut(s) | 61, 226 |
| MmeI | TCCRAC | 1 cut(s) | 42 |
| MnlI | CCTC | 7 cut(s) | 51, 155, 372, 379, 387, 390, 408 |
| MroI | TCCGGA | 1 cut(s) | 382 |
| MseI | TTAA | 1 cut(s) | 29 |
| MslI | CAYNNNNRTG | 1 cut(s) | 341 |
| MspI | CCGG | 2 cut(s) | 314, 383 |
| NlaIII | CATG | 2 cut(s) | 340, 351 |
| PfeI | GAWTC | 1 cut(s) | 286 |
| PkrI | GCNGC | 2 cut(s) | 298, 305 |
| PleI | GAGTC | 2 cut(s) | 61, 226 |
| PpsI | GAGTC | 2 cut(s) | 61, 226 |
| PstI | CTGCAG | 1 cut(s) | 301 |
| RsaI | GTAC | 2 cut(s) | 5, 104 |
| RsaNI | GTAC | 2 cut(s) | 4, 103 |
| RseI | CAYNNNNRTG | 1 cut(s) | 341 |
| SaqAI | TTAA | 1 cut(s) | 29 |
| SatI | GCNGC | 2 cut(s) | 297, 304 |
| SchI | GAGTC | 2 cut(s) | 61, 226 |
| SetI | ASST | 7 cut(s) | 62, 91, 120, 155, 250, 308, 364 |
| SfaNI | GCATC | 3 cut(s) | 127, 175, 251 |
| SfcI | CTRYAG | 1 cut(s) | 297 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 341 |
| SmlI | CTYRAG | 1 cut(s) | 234 |
| SmoI | CTYRAG | 1 cut(s) | 234 |
| Sse9I | AATT | 1 cut(s) | 21 |
| SsiI | CCGC | 2 cut(s) | 81, 401 |
| TaaI | ACNGT | 1 cut(s) | 102 |
| TaqI | TCGA | 1 cut(s) | 40 |
| TasI | AATT | 1 cut(s) | 21 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TfiI | GAWTC | 1 cut(s) | 286 |
| Tru1I | TTAA | 1 cut(s) | 29 |
| Tru9I | TTAA | 1 cut(s) | 29 |
| TseI | GCWGC | 2 cut(s) | 296, 303 |