RchiOBHm_Chr2g0125151

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
38769527 .. 38778796
9270 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4014 bp
ATGGCTCCGTCGTTTGAGTTTCCCCAAAGCCTGAGAGCGTTGGAAGAGGACGGAGAAGACAACCGCCTCTACGCTCGGAACCCAGTCGACATCGCTTCTCTTCGTCCCTCCCAACTCGAAGAGTTCGTCAAAGGCATATCCTTTGATCTCTCCGATAAAGAGCTATTCTGTATAGAAGAGCAAGATGTGTTTGATAGTGTGTACTCACTGGTTCGGGGTTACAATGGTCTACCTGCAACTTGTAAAGTTAATCTTGTAGAAAGTCTTCGGTCCAATCTGAGTGTTCTCCTCCCAAATGTTGATTCACTCTCACGGTCTTCTCAAGGTCAGGATGATGCCACTCCGGTGCTGGATCGGGTCGCATCACATCGTAATGCTTTAAAAATCTACACATACTTTCTCTTTACTGTGGTTCTCAATGAGGAGGTTAACATCACTTCCAACAACAATATGAAGGTGACAGCTAGTACCAGGAAGAAGCACCCTAAGAATTCATGGAACTGGGAACCACAAAGGGGCCGCATACTTAATCTGATTGCTAATTCACTGGAGATAAAGCTTGCATTGCTCTTTGGTCCAACAGGCCTAGAAGAAAATTATATTTCTTTTATTGCCAAAAATGCATTTGCTTTGTTTGAAAATGCTACAGTACTAAAGGACTCTGATGCAAAAGATGCTCTGTGTCGTATAATTGGGGCCTGTGCTACAAAATACCAGTATATGGCACAATCATGTGCGTCGATCATGCATCTAGTTCACAAATATGATTTTGTTGTTACTCACATTGCTGATGCGGTTGCTGGGGCTGAGAAGAAGTATGCAGATGGAAGCCTAGCTAATTCTCTTATCAGAGAGATTGGGAGGACAAATCCAAAGGACTACATCAAGGATACTGTTGGGGCTGAAAATGTTGGTCGTCTTTTGGTGGAACTTTCTGATCGGTTACCAAAGTTGATGTCTGTTAACATTGGCCTTCTTGTCCCACATTTTGGTGGGGAATCTTATAAAATAAGGAATGCTCTTGTTGGGGTCTTGGGAAAATTGGTTGCAAAGGCTTTTAAAGATGTTGAGGGTGAAGTGAATTCTAAATCTGTTCGTCTTCGAACCAAGCAAGCCATGTTGGAAATTTTGCTTGAGCGGTGTCGAGATGTATCAGCTTATACCCGGAGTCGGGTTCTCCAAATTTGGGCTGAACTGTGCGAAGAACATTGTGTTTCAATTGGATTGTGGAATGAGCTGGCTGAAGTTGCTGCTGGGAGGTTAGAGGATAAGAGTGCAATGGTCAGAAAATCAGCATTAAATTTACTTATCATGATGTTGCAGCATAACCCTTTTGGTCCACAGCTTCGAATAGCTTCATTTGAAGCAACCCTACAGCAGTACAAGAAGAAGCTGAAAGAGCTTGAACCAGATACTCCCTCAGAAAGTGATATGAACAGATTACCATCTTTCAGTAATACATCGGGGAATGCTGAGGTTGATGATGTAACTGCAGGGTTGACCAAGGTGCAGCAGGATAGCTTACCTGATAGTTGCTTGCCTCAGATGGAAGAAGATCTAGTTCAGAAGGATGGGTGTGTCCCAGATGTTGGGAACTTAGAGCAGACTAGGGCTTTGGTAGCTTCACTTGAGGCTGGATTAAGGTTTTCAAAGTGTATATCGACCACAATCCCAACACTTGCTCAATTGATGGCATCATCTTCTGCCACTGACGTTGAGAACACAATAAATTTGTTAATGAGGTGCCGACAATTTCAAATTGATGCCTCAGAAGCATGTCTTCATAAGATGTTGCCACTGGTATTTTCTCAGGATAAATCCATCTATGAAGCTGTGGAAAATGCCTTCATTACAATTTACATAAAGAAAAACCCCGTAGAAGCGGCCAGGAATCTTATAAATCTTGCCATAGAATCAAATATTGGAGATCTAGCTGCTCTTGAGTTTATAGTTGGTGCCTTGGTGTCCAAAGGCAACATATCCAATGCTGCGATATCAGCGTTATGGGATTTCTTTTGCTTCAACATAAGTGGAACTACTGCTATTCAAAGTTGTGGGGCACTGTCTATCCTTTGCATGGCAGCAAAATCATCCTCTGCAGTTCTTAGCTCTCATTTACAGGACATTATTGATATTGGGTTTGGCCGTTGGGCAAAAATAGAACCGTTGCTTGCTAGGACAGCATGCGTTGCTCTTCAGAGATTATCTGAAGATGATAGGAAAAAGTTGTTATCTAGTAATGGAAGCCGGGCTTTTGGTATTTTAGAAAGCTTAATTACTGGTTTTTGGCTTCCAGAAAACATATGGTATGCTGCTGCTGACAAAGCCATAGCTGCTATATATACAATTCATCCAACACCGGAAACTTTCGCTGCCAATCTAGTAAAGAAGTCCCTAAGATCTGTGTTTGATTGTAGTGGAGGTGAGGAGTTGCATAATGAAATTGGCGGTGGTAGTGCTGGAATACTTACAACTGTTCAAGTGGAAAGACTTGGTAGATATCTCTTTGTCGTAAGTCATGTTGCCATGAACCAGCTATTATATATTGAATCCTGCCTGCGGAAGGTTCAGAAACAGAAAGTTGGCAAAGAGAAGATGAATTATGATTTTCAGCATGCTAATGGTGCAATGCTGGCTGATACCTCAAAGGAAATTGGTATAAATGCTGAGCTTGGCCTTACCGCCTCTGAAGATGCAATACTTGACACTCTCTCTGACAAAGCAGAAAAAGAGATAGTTTGTGGTGGTTCCACGGAGAAGAATTTGATTGGACATTGTGCACCCTTTCTGTCAAAACTTTGTAGAAATTTTAGTTTAATGCAAAAGTATCCGGAACTACAAGTATCTGCAATGCTTGCTTTGTGTCGGTTTATGATTATTGATGCATGTTTCTGTGACACAAATCTCCAGCTACTCTTCACAGTTGTGGAGAGTGCACCATCAGAAATTGTCCGTTCCAATTGCACTATTTGTCTTGGAGATTTGGCAGTTCGGTTCCCTAATTTGTTAGAACCATGGACAGAGAATATGTATTCCAGGCTACAGGATCCTTCAGTTTCTGTTAGGAAGAACGCTGTTTTGGTGCTATCACACCTCATACTAAACGACATGATGAAGGTCAAAGGTTACATAAATGAAATGGCCATAAGATTAGAAGATGAAGATGAGAGGATTTCAAATCTGGCTAAGCTATTTTTTAATGAGTTATCCAAAAAAGGTAGCAATCCAATATATAACCTGCTTCCGGATATACTTGGGAAATTATCCAACCAGAATCTCAAGAGAGAATCTTTCTGCAACATCATGCAGTTTTTGATTGGTTCTATCAAGAAGGACAAACAAATGGAATCTCTTGTTGAAAAACTTTGTAATAGATTCAGTGGAGTTACAGATATCAGACAATGGGAATATATTTCTTATTGCCTTTCTCAGCTGGCATTCACTGAAAAGGGGATGAAGAAGCTTATGGAGTCATTCAAGACATATGAACATGTCCTATCAGAGGATTCTGTGATGGACCATTTTAAGTCCATAATAAACAAGGGCAAGAAGTTTGCAAAACCTGAACTTAAACTGTGCATTGAGGAGTTTGAGGATAAGCTGAATAAGTTCCACTTGGAAAAGAAAGAACAAGAAGTAACAGCAAGAAATGCCCAAATTCATCAACAGAAGATTGACAGCATGGAAGATTTTGTGGTTACTAGGAATGCTGGCGAGGCTCATATGGAATCAGATAATGATGAAGGAACAGATGGTGAAGTCATTGATCCATGTACCGAAGGGATGATCAAGTCTGTGAATGAAACGTCAAAATCCAGATGTGTTGAGTCGGAAGAACATTCTGTTGCTTCCAGTGAGTTGACAGAATCAGAACCAGATGATTCTGAAATTCAGTCGCCAAATGTCATCTTAAGAGGGGCCTCAAAAGCTGGATCTGAGAAAAGCAACATGAAAGATAAAAAAAGTCACGTCCCTGCATCATCAAGAAGAAACATCAGGTCAAAGCAAAGGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1337

Amino Acids

148.66

Weight (kDa)

5.71

Isoelectric Point (pI)

45.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cnd1_N PF12922 81 - 242 1.7e-35 non-SMC mitotic condensation complex subunit 1, N-term
Cnd1 PF12717 983 - 1143 2.7e-50 non-SMC mitotic condensation complex subunit 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1005, 1898
Acc36I ACCTGC 2 cut(s) 241, 3246
AccB1I GGYRCC 2 cut(s) 1743, 1955
AccB7I CCANNNNNTGG 3 cut(s) 721, 989, 1589
AccBSI CCGCTC 1 cut(s) 1138
AccI GTMKAC 2 cut(s) 87, 229
AccIII TCCGGA 2 cut(s) 2830, 3244
AciI CCGC 8 cut(s) 64, 520, 794, 1138, 1883, 2448, 2560, 2682
AclWI GGATC 5 cut(s) 360, 3041, 3054, 3761, 3940
AcoI YGGCCR 3 cut(s) 1884, 2143, 3141
AcuI CTGAAG 5 cut(s) 1263, 2180, 2229, 2709, 3036
AfaI GTAC 5 cut(s) 203, 469, 651, 1382, 3775
AflII CTTAAG 1 cut(s) 3910
AflIII ACRYGT 1 cut(s) 3490
AjiI CACGTC 1 cut(s) 3970
AjnI CCWGG 3 cut(s) 470, 1886, 3035
AjuI GAANNNNNNNTTGG 6 cut(s) 286, 318, 1905, 1937, 3062, 3094
AleI CACNNNNGTG 2 cut(s) 344, 2924
Alw21I GWGCWC 2 cut(s) 2782, 2938
Alw44I GTGCAC 2 cut(s) 2778, 2934
AlwI GGATC 5 cut(s) 360, 3041, 3054, 3761, 3940
AlwNI CAGNNNCTG 1 cut(s) 3059
Aor13HI TCCGGA 2 cut(s) 2830, 3244
AoxI GGCC 9 cut(s) 517, 583, 696, 970, 1884, 2143, 2674, 3141, 3918
ApaLI GTGCAC 2 cut(s) 2778, 2934
ArsI GACNNNNNNTTYG 6 cut(s) 111, 143, 941, 973, 1597, 1629
Asp700I GAANNNNTTC 3 cut(s) 264, 1354, 3608
AspS9I GGNCC 7 cut(s) 270, 517, 575, 696, 1337, 3517, 3918
AsuC2I CCSGG 2 cut(s) 1165, 2249
AsuHPI GGTGA 4 cut(s) 469, 1085, 2435, 3767
AsuII TTCGAA 2 cut(s) 1102, 1348
AvaII GGWCC 4 cut(s) 270, 575, 1337, 3517
BaeGI GKGCMC 3 cut(s) 2062, 2782, 2938
BalI TGGCCA 1 cut(s) 3143
BamHI GGATCC 1 cut(s) 3046
BanI GGYRCC 2 cut(s) 1743, 1955
BarI GAAGNNNNNNTAC 6 cut(s) 249, 281, 1356, 1388, 2682, 2714
BbsI GAAGAC 5 cut(s) 63, 257, 309, 1091, 1772
Bbv12I GWGCWC 2 cut(s) 2782, 2938
BbvCI CCTCAGC 1 cut(s) 1473
BccI CCATC 9 cut(s) 818, 1453, 1540, 1565, 1684, 1829, 2947, 3508, 3746
BceAI ACGGC 1 cut(s) 2130
BciT130I CCWGG 3 cut(s) 472, 1888, 3037
BciVI GTATCC 2 cut(s) 883, 2838
BclI TGATCA 1 cut(s) 3786
BcnI CCSGG 2 cut(s) 1165, 2249
BfmI CTRYAG 5 cut(s) 645, 1373, 1491, 2097, 3041
BfrI CTTAAG 1 cut(s) 3910
BfuAI ACCTGC 2 cut(s) 241, 3246
BfuI GTATCC 2 cut(s) 883, 2838
BglII AGATCT 3 cut(s) 1555, 1927, 2399
BlpI GCTNAGC 2 cut(s) 2667, 3186
BmcAI AGTACT 1 cut(s) 651
Bme1390I CCNGG 5 cut(s) 472, 1165, 1888, 2249, 3037
Bme18I GGWCC 4 cut(s) 270, 575, 1337, 3517
BmgBI CACGTC 1 cut(s) 3970
BmgT120I GGNCC 7 cut(s) 270, 517, 575, 696, 1337, 3517, 3918
BmrFI CCNGG 5 cut(s) 472, 1165, 1888, 2249, 3037
BmrI ACTGGG 2 cut(s) 77, 511
BmuI ACTGGG 2 cut(s) 77, 511
BpiI GAAGAC 5 cut(s) 63, 257, 309, 1091, 1772
BpmI CTGGAG 2 cut(s) 569, 2891
Bpu10I CCTNAGC 1 cut(s) 1473
Bpu1102I GCTNAGC 2 cut(s) 2667, 3186
Bpu14I TTCGAA 2 cut(s) 1102, 1348
BpuEI CTTGAG 5 cut(s) 306, 1154, 1649, 1961, 3263
BpuMI CCSGG 2 cut(s) 1165, 2249
BsaBI GATNNNNATC 1 cut(s) 1444
BsaJI CCNNGG 4 cut(s) 1503, 1959, 2751, 3014
BsaWI WCCGGW 4 cut(s) 343, 2359, 2830, 3244
Bse1I ACTGG 8 cut(s) 83, 213, 506, 552, 715, 1803, 2284, 3852
Bse3DI GCAATG 5 cut(s) 563, 783, 1284, 2634, 2856
Bse8I GATNNNNATC 1 cut(s) 1444
BseAI TCCGGA 2 cut(s) 2830, 3244
BseBI CCWGG 3 cut(s) 472, 1888, 3037
BseDI CCNNGG 4 cut(s) 1503, 1959, 2751, 3014
BseGI GGATG 6 cut(s) 337, 1576, 2090, 2350, 3459, 3789
BseJI GATNNNNATC 1 cut(s) 1444
BseMI GCAATG 5 cut(s) 563, 783, 1284, 2634, 2856
BseNI ACTGG 8 cut(s) 83, 213, 506, 552, 715, 1803, 2284, 3852
BseRI GAGGAG 4 cut(s) 278, 437, 2441, 3599
BseSI GKGCMC 3 cut(s) 2062, 2782, 2938
BseYI CCCAGC 2 cut(s) 800, 1253
BsgI GTGCAG 1 cut(s) 1529
BshFI GGCC 9 cut(s) 519, 585, 698, 972, 1886, 2145, 2676, 3143, 3920
BshNI GGYRCC 2 cut(s) 1743, 1955
BsiHKAI GWGCWC 2 cut(s) 2782, 2938
BsiSI CCGG 6 cut(s) 344, 1165, 2248, 2360, 2831, 3245
BslFI GGGAC 5 cut(s) 90, 965, 1565, 2377, 3956
BsmFI GGGAC 5 cut(s) 90, 965, 1565, 2377, 3956
BsmI GAATGC 4 cut(s) 1021, 1474, 3437, 3712
BsnI GGCC 9 cut(s) 519, 585, 698, 972, 1886, 2145, 2676, 3143, 3920
Bsp119I TTCGAA 2 cut(s) 1102, 1348
Bsp1286I GDGCHC 3 cut(s) 2062, 2782, 2938
Bsp13I TCCGGA 2 cut(s) 2830, 3244
Bsp1720I GCTNAGC 2 cut(s) 2667, 3186
Bsp19I CCATGG 1 cut(s) 3014
BspACI CCGC 8 cut(s) 64, 520, 794, 1138, 1883, 2448, 2560, 2682
BspANI GGCC 9 cut(s) 519, 585, 698, 972, 1886, 2145, 2676, 3143, 3920
BspEI TCCGGA 2 cut(s) 2830, 3244
BspHI TCATGA 1 cut(s) 1311
BspMAI CTGCAG 2 cut(s) 1495, 2101
BspMI ACCTGC 2 cut(s) 241, 3246
BspPI GGATC 5 cut(s) 360, 3041, 3054, 3761, 3940
BspQI GCTCTTC 2 cut(s) 171, 2199
BspT104I TTCGAA 2 cut(s) 1102, 1348
BspT107I GGYRCC 2 cut(s) 1743, 1955
BspTI CTTAAG 1 cut(s) 3910
BsrBI CCGCTC 1 cut(s) 1138
BsrDI GCAATG 5 cut(s) 563, 783, 1284, 2634, 2856
BsrI ACTGG 8 cut(s) 83, 213, 506, 552, 715, 1803, 2284, 3852
BssECI CCNNGG 4 cut(s) 1503, 1959, 2751, 3014
BssT1I CCWWGG 3 cut(s) 1503, 1959, 3014
Bst2UI CCWGG 3 cut(s) 472, 1888, 3037
Bst6I CTCTTC 6 cut(s) 39, 105, 114, 171, 2199, 2921
BstAFI CTTAAG 1 cut(s) 3910
BstAPI GCANNNNNTGC 4 cut(s) 674, 2189, 2855, 3650
BstBI TTCGAA 2 cut(s) 1102, 1348
BstDSI CCRYGG 2 cut(s) 2751, 3014
BstEII GGTNACC 1 cut(s) 942
BstENI CCTNNNNNAGG 2 cut(s) 2561, 3500
BstF5I GGATG 6 cut(s) 337, 1576, 2090, 2350, 3459, 3789
BstNI CCWGG 3 cut(s) 472, 1888, 3037
BstNSI RCATGY 5 cut(s) 1779, 2187, 2618, 2889, 3494
BstPI GGTNACC 1 cut(s) 942
BstSCI CCNGG 5 cut(s) 470, 1163, 1886, 2247, 3035
BstSFI CTRYAG 5 cut(s) 645, 1373, 1491, 2097, 3041
BstSLI GKGCMC 3 cut(s) 2062, 2782, 2938
BstV2I GAAGAC 5 cut(s) 63, 257, 309, 1091, 1772
BstX2I RGATCY 5 cut(s) 1555, 1927, 2399, 3046, 3932
BstYI RGATCY 5 cut(s) 1555, 1927, 2399, 3046, 3932
BsuI GTATCC 2 cut(s) 883, 2838
BsuRI GGCC 9 cut(s) 519, 585, 698, 972, 1886, 2145, 2676, 3143, 3920
BtgI CCRYGG 2 cut(s) 2751, 3014
BtgZI GCGATG 1 cut(s) 76
BtrI CACGTC 1 cut(s) 3970
BtsCI GGATG 6 cut(s) 337, 1576, 2090, 2350, 3459, 3789
BtsIMutI CAGTG 8 cut(s) 206, 545, 1707, 1796, 2060, 3385, 3441, 3859
BveI ACCTGC 2 cut(s) 241, 3246
CaiI CAGNNNCTG 1 cut(s) 3059
CciI TCATGA 1 cut(s) 1311
Cfr13I GGNCC 7 cut(s) 270, 517, 575, 696, 1337, 3517, 3918
CseI GACGC 1 cut(s) 726
Csp6I GTAC 5 cut(s) 202, 468, 650, 1381, 3774
CspCI CAANNNNNGTGG 4 cut(s) 1696, 1731, 2011, 2046
CviQI GTAC 5 cut(s) 202, 468, 650, 1381, 3774
DraI TTTAAA 2 cut(s) 381, 1060
EaeI YGGCCR 3 cut(s) 1884, 2143, 3141
Eam1104I CTCTTC 6 cut(s) 39, 105, 114, 171, 2199, 2921
EarI CTCTTC 6 cut(s) 39, 105, 114, 171, 2199, 2921
Eco130I CCWWGG 3 cut(s) 1503, 1959, 3014
Eco147I AGGCCT 1 cut(s) 585
Eco32I GATATC 3 cut(s) 1995, 2501, 3394
Eco47I GGWCC 4 cut(s) 270, 575, 1337, 3517
Eco57I CTGAAG 5 cut(s) 1263, 2180, 2229, 2709, 3036
Eco91I GGTNACC 1 cut(s) 942
EcoNI CCTNNNNNAGG 2 cut(s) 2561, 3500
EcoO109I RGGNCCY 2 cut(s) 696, 3918
EcoO65I GGTNACC 1 cut(s) 942
EcoRI GAATTC 2 cut(s) 490, 1081
EcoRII CCWGG 3 cut(s) 470, 1886, 3035
EcoRV GATATC 3 cut(s) 1995, 2501, 3394
EcoT14I CCWWGG 3 cut(s) 1503, 1959, 3014
EcoT22I ATGCAT 3 cut(s) 625, 750, 2887
ErhI CCWWGG 3 cut(s) 1503, 1959, 3014
FalI AAGNNNNNCTT 8 cut(s) 237, 269, 1764, 1796, 2236, 2268, 3599, 3631
FaqI GGGAC 5 cut(s) 90, 965, 1565, 2377, 3956
FauNDI CATATG 3 cut(s) 2303, 3484, 3723
FbaI TGATCA 1 cut(s) 3786
FblI GTMKAC 2 cut(s) 87, 229
FokI GGATG 6 cut(s) 344, 1583, 2077, 2337, 3466, 3796
GsaI CCCAGC 2 cut(s) 804, 1257
GsuI CTGGAG 2 cut(s) 569, 2891
HaeIII GGCC 9 cut(s) 519, 585, 698, 972, 1886, 2145, 2676, 3143, 3920
HapII CCGG 6 cut(s) 344, 1165, 2248, 2360, 2831, 3245
HgaI GACGC 1 cut(s) 726
HincII GTYRAC 5 cut(s) 88, 430, 964, 1500, 3861
HindII GTYRAC 5 cut(s) 88, 430, 964, 1500, 3861
HindIII AAGCTT 3 cut(s) 557, 2269, 3461
HpaI GTTAAC 2 cut(s) 430, 964
HpaII CCGG 6 cut(s) 344, 1165, 2248, 2360, 2831, 3245
HphI GGTGA 4 cut(s) 469, 1085, 2435, 3767
Hpy99I CGWCG 2 cut(s) 13, 742
HpyCH4IV ACGT 3 cut(s) 1713, 3806, 3969
HpySE526I ACGT 3 cut(s) 1713, 3806, 3969
Kpn2I TCCGGA 2 cut(s) 2830, 3244
Ksp22I TGATCA 1 cut(s) 3786
KspAI GTTAAC 2 cut(s) 430, 964
LguI GCTCTTC 2 cut(s) 171, 2199
LmnI GCTCC 1 cut(s) 10
MaeII ACGT 3 cut(s) 1713, 3806, 3969
MbiI CCGCTC 1 cut(s) 1138
MfeI CAATTG 3 cut(s) 1218, 1685, 2959
MflI RGATCY 5 cut(s) 1555, 1927, 2399, 3046, 3932
MhlI GDGCHC 3 cut(s) 2062, 2782, 2938
MlsI TGGCCA 1 cut(s) 3143
MluNI TGGCCA 1 cut(s) 3143
MlyI GAGTC 4 cut(s) 653, 1177, 3479, 3836
MmeI TCCRAC 7 cut(s) 21, 465, 602, 1101, 2378, 3291, 3810
Mox20I TGGCCA 1 cut(s) 3143
Mph1103I ATGCAT 3 cut(s) 625, 750, 2887
MroI TCCGGA 2 cut(s) 2830, 3244
MroXI GAANNNNTTC 3 cut(s) 264, 1354, 3608
MscI TGGCCA 1 cut(s) 3143
MslI CAYNNNNRTG 7 cut(s) 344, 372, 730, 762, 990, 2619, 2924
Msp20I TGGCCA 1 cut(s) 3143
MspA1I CMGCKG 1 cut(s) 3433
MspCI CTTAAG 1 cut(s) 3910
MspI CCGG 6 cut(s) 344, 1165, 2248, 2360, 2831, 3245
MspR9I CCNGG 5 cut(s) 472, 1165, 1888, 2249, 3037
MunI CAATTG 3 cut(s) 1218, 1685, 2959
Mva1269I GAATGC 4 cut(s) 1021, 1474, 3437, 3712
MvaI CCWGG 3 cut(s) 472, 1888, 3037
NciI CCSGG 2 cut(s) 1165, 2249
NcoI CCATGG 1 cut(s) 3014
NdeI CATATG 3 cut(s) 2303, 3484, 3723
NmuCI GTSAC 3 cut(s) 457, 2894, 3965
NsiI ATGCAT 3 cut(s) 625, 750, 2887
NspI RCATGY 5 cut(s) 1779, 2187, 2618, 2889, 3494
NspV TTCGAA 2 cut(s) 1102, 1348
OliI CACNNNNGTG 2 cut(s) 344, 2924
PaeI GCATGC 2 cut(s) 2187, 2618
PagI TCATGA 1 cut(s) 1311
PceI AGGCCT 1 cut(s) 585
PciI ACATGT 1 cut(s) 3490
PciSI GCTCTTC 2 cut(s) 171, 2199
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 4 cut(s) 1021, 1474, 3437, 3712
PdmI GAANNNNTTC 3 cut(s) 264, 1354, 3608
PflMI CCANNNNNTGG 3 cut(s) 721, 989, 1589
PleI GAGTC 4 cut(s) 653, 1176, 3478, 3835
PpsI GAGTC 4 cut(s) 653, 1176, 3478, 3835
PscI ACATGT 1 cut(s) 3490
PsiI TTATAA 2 cut(s) 1005, 1898
Psp6I CCWGG 3 cut(s) 470, 1886, 3035
PspEI GGTNACC 1 cut(s) 942
PspFI CCCAGC 2 cut(s) 800, 1253
PspGI CCWGG 3 cut(s) 470, 1886, 3035
PspPI GGNCC 7 cut(s) 270, 517, 575, 696, 1337, 3517, 3918
PstI CTGCAG 2 cut(s) 1495, 2101
PstNI CAGNNNCTG 1 cut(s) 3059
PsuI RGATCY 5 cut(s) 1555, 1927, 2399, 3046, 3932
PvuII CAGCTG 1 cut(s) 3433
RsaI GTAC 5 cut(s) 203, 469, 651, 1382, 3775
RsaNI GTAC 5 cut(s) 202, 468, 650, 1381, 3774
RseI CAYNNNNRTG 7 cut(s) 344, 372, 730, 762, 990, 2619, 2924
SalI GTCGAC 1 cut(s) 86
SapI GCTCTTC 2 cut(s) 171, 2199
Sau96I GGNCC 7 cut(s) 270, 517, 575, 696, 1337, 3517, 3918
ScaI AGTACT 1 cut(s) 651
SchI GAGTC 4 cut(s) 653, 1177, 3479, 3836
ScrFI CCNGG 5 cut(s) 472, 1165, 1888, 2249, 3037
SduI GDGCHC 3 cut(s) 2062, 2782, 2938
SfcI CTRYAG 5 cut(s) 645, 1373, 1491, 2097, 3041
SfuI TTCGAA 2 cut(s) 1102, 1348
SinI GGWCC 4 cut(s) 270, 575, 1337, 3517
SmiMI CAYNNNNRTG 7 cut(s) 344, 372, 730, 762, 990, 2619, 2924
SmlI CTYRAG 6 cut(s) 321, 1133, 1628, 1940, 3278, 3910
SmoI CTYRAG 6 cut(s) 321, 1133, 1628, 1940, 3278, 3910
SphI GCATGC 2 cut(s) 2187, 2618
SseBI AGGCCT 1 cut(s) 585
SsiI CCGC 8 cut(s) 64, 520, 794, 1138, 1883, 2448, 2560, 2682
SspI AATATT 1 cut(s) 1921
StuI AGGCCT 1 cut(s) 585
StyD4I CCNGG 5 cut(s) 470, 1163, 1886, 2247, 3035
StyI CCWWGG 3 cut(s) 1503, 1959, 3014
TaiI ACGT 3 cut(s) 1716, 3809, 3972
TaqI TCGA 7 cut(s) 87, 117, 740, 1102, 1144, 1348, 1661
TaqII GACCGA 1 cut(s) 258
TatI WGTACW 3 cut(s) 201, 649, 1380
TauI GCSGC 2 cut(s) 522, 1886
TscAI CASTG 8 cut(s) 213, 552, 1714, 1803, 2067, 3385, 3448, 3859
TseFI GTSAC 3 cut(s) 457, 2894, 3965
Tsp45I GTSAC 3 cut(s) 457, 2894, 3965
TspGWI ACGGA 3 cut(s) 66, 2768, 2942
TspRI CASTG 8 cut(s) 213, 552, 1714, 1803, 2067, 3385, 3448, 3859
Van91I CCANNNNNTGG 3 cut(s) 721, 989, 1589
Vha464I CTTAAG 1 cut(s) 3910
VneI GTGCAC 2 cut(s) 2778, 2934
VpaK11BI GGWCC 4 cut(s) 270, 575, 1337, 3517
XagI CCTNNNNNAGG 2 cut(s) 2561, 3500
XceI RCATGY 5 cut(s) 1779, 2187, 2618, 2889, 3494
XcmI CCANNNNNNNNNTGG 2 cut(s) 346, 2301
XmiI GTMKAC 2 cut(s) 87, 229
XmnI GAANNNNTTC 3 cut(s) 264, 1354, 3608
ZrmI AGTACT 1 cut(s) 651
Zsp2I ATGCAT 3 cut(s) 625, 750, 2887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.