alpha-amylase 3
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0316721 |
| rosa_laevigata | RLG00000030649 |
| rosa_roxburghii | Rroxscaffold_4G00330850 Rroxscaffold_5G00374640 |
| rosa_rugosa | Rorug01G0012500 |
| rosa_samantha | Rh1CG020800 Rh1DG020000 |
| rosa_wichuraiana | Rw1G001520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 132 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 116 |
| AgsI | TTSAA | 1 cut(s) | 103 |
| AluBI | AGCT | 1 cut(s) | 180 |
| AluI | AGCT | 1 cut(s) | 180 |
| AsuHPI | GGTGA | 1 cut(s) | 83 |
| BbsI | GAAGAC | 1 cut(s) | 44 |
| BccI | CCATC | 1 cut(s) | 128 |
| BfuAI | ACCTGC | 1 cut(s) | 132 |
| BmsI | GCATC | 2 cut(s) | 8, 88 |
| BpiI | GAAGAC | 1 cut(s) | 44 |
| BsaBI | GATNNNNATC | 1 cut(s) | 78 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 116 |
| Bse3DI | GCAATG | 1 cut(s) | 145 |
| Bse8I | GATNNNNATC | 1 cut(s) | 78 |
| BseGI | GGATG | 1 cut(s) | 64 |
| BseJI | GATNNNNATC | 1 cut(s) | 78 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 116 |
| BseMI | GCAATG | 1 cut(s) | 145 |
| BseMII | CTCAG | 1 cut(s) | 28 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 116 |
| BspCNI | CTCAG | 1 cut(s) | 27 |
| BspMI | ACCTGC | 1 cut(s) | 132 |
| BsrDI | GCAATG | 1 cut(s) | 145 |
| Bst6I | CTCTTC | 1 cut(s) | 117 |
| BstC8I | GCNNGC | 1 cut(s) | 11 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 64 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstV2I | GAAGAC | 1 cut(s) | 44 |
| BtsCI | GGATG | 1 cut(s) | 64 |
| BveI | ACCTGC | 1 cut(s) | 132 |
| Cac8I | GCNNGC | 1 cut(s) | 11 |
| CviAII | CATG | 1 cut(s) | 33 |
| CviJI | RGCY | 2 cut(s) | 120, 180 |
| CviKI_1 | RGCY | 2 cut(s) | 120, 180 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| Eam1104I | CTCTTC | 1 cut(s) | 117 |
| EarI | CTCTTC | 1 cut(s) | 117 |
| Eco32I | GATATC | 1 cut(s) | 27 |
| EcoRV | GATATC | 1 cut(s) | 27 |
| FaeI | CATG | 1 cut(s) | 36 |
| FaiI | YATR | 2 cut(s) | 34, 87 |
| FatI | CATG | 1 cut(s) | 32 |
| FokI | GGATG | 1 cut(s) | 71 |
| Hin1II | CATG | 1 cut(s) | 36 |
| HphI | GGTGA | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 2 cut(s) | 17, 174 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 127 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| Hsp92II | CATG | 1 cut(s) | 36 |
| LmnI | GCTCC | 1 cut(s) | 146 |
| LpnPI | CCDG | 4 cut(s) | 23, 35, 101, 137 |
| LweI | GCATC | 2 cut(s) | 8, 88 |
| MboII | GAAGA | 4 cut(s) | 49, 74, 104, 143 |
| MluCI | AATT | 1 cut(s) | 66 |
| MmeI | TCCRAC | 1 cut(s) | 124 |
| MnlI | CCTC | 2 cut(s) | 83, 120 |
| MspA1I | CMGCKG | 1 cut(s) | 180 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NlaIII | CATG | 1 cut(s) | 36 |
| PvuII | CAGCTG | 1 cut(s) | 180 |
| SetI | ASST | 3 cut(s) | 44, 126, 182 |
| SfaNI | GCATC | 2 cut(s) | 8, 88 |
| SgeI | CNNG | 7 cut(s) | 22, 34, 45, 67, 128, 136, 140 |
| Sse9I | AATT | 1 cut(s) | 66 |
| TasI | AATT | 1 cut(s) | 66 |
| TspDTI | ATGAA | 1 cut(s) | 75 |