alpha-amylase 3
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0316721 |
| rosa_laevigata | RLG00000030649 |
| rosa_roxburghii | Rroxscaffold_4G00330850 Rroxscaffold_5G00374640 |
| rosa_rugosa | Rorug01G0012500 |
| rosa_samantha | Rh1CG020800 Rh1DG020000 |
| rosa_wichuraiana | Rw1G001520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 144 |
| AciI | CCGC | 1 cut(s) | 10 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 128 |
| AgsI | TTSAA | 1 cut(s) | 115 |
| AluBI | AGCT | 1 cut(s) | 192 |
| AluI | AGCT | 1 cut(s) | 192 |
| AsuHPI | GGTGA | 1 cut(s) | 95 |
| BbsI | GAAGAC | 1 cut(s) | 56 |
| BccI | CCATC | 1 cut(s) | 140 |
| BfuAI | ACCTGC | 1 cut(s) | 144 |
| BmsI | GCATC | 3 cut(s) | 3, 20, 100 |
| BpiI | GAAGAC | 1 cut(s) | 56 |
| BsaBI | GATNNNNATC | 1 cut(s) | 90 |
| BsaJI | CCNNGG | 1 cut(s) | 54 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 128 |
| Bse3DI | GCAATG | 2 cut(s) | 5, 157 |
| Bse8I | GATNNNNATC | 1 cut(s) | 90 |
| BseDI | CCNNGG | 1 cut(s) | 54 |
| BseGI | GGATG | 2 cut(s) | 18, 76 |
| BseJI | GATNNNNATC | 1 cut(s) | 90 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 128 |
| BseMI | GCAATG | 2 cut(s) | 5, 157 |
| BseMII | CTCAG | 1 cut(s) | 40 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 128 |
| BspACI | CCGC | 1 cut(s) | 10 |
| BspCNI | CTCAG | 1 cut(s) | 39 |
| BspMI | ACCTGC | 1 cut(s) | 144 |
| BsrDI | GCAATG | 2 cut(s) | 5, 157 |
| BssECI | CCNNGG | 1 cut(s) | 54 |
| BssT1I | CCWWGG | 1 cut(s) | 54 |
| Bst6I | CTCTTC | 1 cut(s) | 129 |
| BstC8I | GCNNGC | 1 cut(s) | 23 |
| BstDEI | CTNAG | 1 cut(s) | 26 |
| BstF5I | GGATG | 2 cut(s) | 18, 76 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 1 cut(s) | 56 |
| BtsCI | GGATG | 2 cut(s) | 18, 76 |
| BveI | ACCTGC | 1 cut(s) | 144 |
| Cac8I | GCNNGC | 1 cut(s) | 23 |
| CviAII | CATG | 1 cut(s) | 45 |
| CviJI | RGCY | 2 cut(s) | 132, 192 |
| CviKI_1 | RGCY | 2 cut(s) | 132, 192 |
| DdeI | CTNAG | 1 cut(s) | 26 |
| Eam1104I | CTCTTC | 1 cut(s) | 129 |
| EarI | CTCTTC | 1 cut(s) | 129 |
| Eco130I | CCWWGG | 1 cut(s) | 54 |
| EcoT14I | CCWWGG | 1 cut(s) | 54 |
| ErhI | CCWWGG | 1 cut(s) | 54 |
| FaeI | CATG | 1 cut(s) | 48 |
| FaiI | YATR | 1 cut(s) | 46 |
| FatI | CATG | 1 cut(s) | 44 |
| FokI | GGATG | 2 cut(s) | 25, 83 |
| Hin1II | CATG | 1 cut(s) | 48 |
| HphI | GGTGA | 1 cut(s) | 95 |
| Hpy188I | TCNGA | 2 cut(s) | 29, 186 |
| HpyCH4V | TGCA | 1 cut(s) | 139 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 22 |
| HpyF3I | CTNAG | 1 cut(s) | 26 |
| Hsp92II | CATG | 1 cut(s) | 48 |
| LmnI | GCTCC | 1 cut(s) | 158 |
| LpnPI | CCDG | 4 cut(s) | 35, 47, 113, 149 |
| LweI | GCATC | 3 cut(s) | 3, 20, 100 |
| MboII | GAAGA | 4 cut(s) | 61, 86, 116, 155 |
| MluCI | AATT | 1 cut(s) | 78 |
| MmeI | TCCRAC | 1 cut(s) | 136 |
| MnlI | CCTC | 2 cut(s) | 95, 132 |
| MspA1I | CMGCKG | 1 cut(s) | 192 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 22 |
| NlaIII | CATG | 1 cut(s) | 48 |
| PvuII | CAGCTG | 1 cut(s) | 192 |
| SetI | ASST | 3 cut(s) | 56, 138, 194 |
| SfaNI | GCATC | 3 cut(s) | 3, 20, 100 |
| SgeI | CNNG | 8 cut(s) | 34, 46, 57, 67, 79, 140, 148, 152 |
| Sse9I | AATT | 1 cut(s) | 78 |
| SsiI | CCGC | 1 cut(s) | 10 |
| StyI | CCWWGG | 1 cut(s) | 54 |
| TasI | AATT | 1 cut(s) | 78 |
| TspDTI | ATGAA | 1 cut(s) | 87 |