RchiOBHm_Chr1g0378611

Tic22-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0012179
Physical Location & Seq
Forward (+)
65024523 .. 65028109
3587 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1758 bp
ATGGATATGTCCTCCCTTCGTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCGTCTCATCCTCTTTTATACACACACAGACACACTCACATTGACGAGACTCATCACCTTCCATGGCCTCACCAACCGAGCCACCCCAAACCCAGCACCACCACCACCCAAAACCCATCGCCCACTTGCTCAACTCCGCCACCGCCAACCTCCTCTCCCTCTTCGCCGCCCCCAAAACGACGCCGTCTTCTTCCTCCCCTCCACAATCCGCCTCGCCCTCTTCCTCCCCACCTCCCCCAAACCCCTCTCTCCTCCTCCTCCTCCTCAACCCGCCGCCATGAAGACCGCCGTGCCGGCGCCGCCGGCGGAGTCGACCTCGTCCTCGTTCCCGGCGACCGTCAAGATTGCCGGGCTCAATTCCATGATCAAGGGCAGTGGGCCCGCCTTTGTGGGCCAGGTCTTCAGTATGTGCGACCTCTCCGGCACTGGGCTCATGGCCGTCTCCACCCACTTCGATATTCCCTTCATTTCCAAAAGAACTCCTGAGTGGCTTAAGAAGATGTTTGCATCGGTGACTAATAGCGAGAGAAATGATGGCCCGGTGTTTCGGTTTTTTATGGATTTAGGTGATGCAGTTACGTATGTGAAACGGCTGAATATTCCGAGTGGGGTGGTGGGTGCTTGTCGGCTGGATTTGGCTTATGAGCATTTCAAGGAAAAGCCCCACTTATTCCAGTTTGTTCCAAATGAGAAACAGGTCAAGGCAGCTAACAAACTTCTAAAGGGAAACGCAGAGAATGGCAAATGTAAAAGGGTTGATGGAGTCCCAGTTTTTAGTGCTCAAAACTTGGATATTGCAATAGCAAGTCCAGATGGGGTCAAATGGTATACACCCTACTTTTTTGATAAAAACATGCTTGATAACATTCTTGAGGAATCTGTAGATCAGCATTTCCATTCTTTAATTCAAACTCGGCACATGCAGCGGAGAAGGGATGTGGTTGATGACAACTTGGCTGCAGAAGTGATTGAAGAGATGGGTGATAACTTATGGGAACCTCCAGAGGTTCAGGAAGTGATGGATGAAATAGGGAATCCTGGAATACCATTGAGTGTCATATCTAAGGCAGCGGAAATGCAGCTTCATTACACTGTTGACAAAGTAATTCTGGGTAATAGGTGGCTACGGAAGGCAACTGGCATTCAACCAAAATTCCCTTATATGATCGATACTTTTGAGAGAAGGAGTGCAGCTTCTTTTCTTAGAGCTTCCAAGTCAACCAACTGTCTTAGCAATTGTGAAGCAGTAAATGATAATAAAGATTCTCTACAGAGTAGCACTTGCAATATTAAACCAAAGGGTGATATGCAGACCAACAAAGGAAACAGATCCGGTGTCTGGTTTCCTTTTGGAGATTGGTTTAGTCATCTATGGTCAAAACAAAAGCACCAAGATGGAATCTTATCCACGCAATACGTCGATGAGACCTCACAGCTAAATGTACACCTTCCTAAGATTACAATGGTTGGCATTTCATCAACTGGTGAGGCAGGGACCATGAGTAGAGAAAGTGTAAGGAAAACAATGGACGATTTAACAAGAGAACTGGAGCAGACAGATCCAGAAAAAGCCAGTGGTATTGAGGCGAGCGATGACTTTAGATTTGAAGATAGAGATCCACTATTTGTTGCAAATGTGGGTGATTACTATTCTGGCAAGGCAAAGGGTGGAGCACGATTTAGGGTTCGTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tic22

Protein Analysis

585

Amino Acids

65.25

Weight (kDa)

8.64

Isoelectric Point (pI)

48.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tic22 PF04278 238 - 314 7.9e-07 Tic22-like family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012179)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62650
fragaria_vesca FvH4_7g30450 FvH4_7g30450
malus_domestica MD01G1210100.v1.1 MD07G1280200.v1.1
prunus_persica Prupe.2G302400_v2.0.a1 Prupe.2G302400_v2.0.a1 Prupe.2G302400_v2.0.a1
pyrus_communis pycom07g25480
rosa_chinensis RchiOBHm_Chr1g0378611
rosa_laevigata RLG00000026419
rosa_multiflora Rmu_sc0002395.1_g000010
rosa_roxburghii Rroxscaffold_4G00280360
rosa_rugosa Rorug01G0409900
rosa_samantha Rh1AG431400 Rh1BG389700 Rh1CG403000 Rh1DG420900
rosa_wichuraiana Rw1G037790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 358
AccI GTMKAC 2 cut(s) 374, 890
AclWI GGATC 3 cut(s) 1386, 1616, 1673
AcoI YGGCCR 1 cut(s) 498
AcsI RAATTY 1 cut(s) 1214
AcuI CTGAAG 1 cut(s) 448
AcyI GRCGYC 2 cut(s) 243, 359
AfaI GTAC 1 cut(s) 1506
AfiI CCNNNNNNNGG 2 cut(s) 489, 1401
AflII CTTAAG 1 cut(s) 554
AgsI TTSAA 5 cut(s) 715, 971, 1034, 1208, 1670
AjnI CCWGG 2 cut(s) 456, 1099
AluBI AGCT 5 cut(s) 770, 1144, 1256, 1271, 1498
AluI AGCT 5 cut(s) 770, 1144, 1256, 1271, 1498
Alw21I GWGCWC 2 cut(s) 844, 1738
Alw26I GTCTC 5 cut(s) 29, 71, 103, 508, 1481
AlwI GGATC 3 cut(s) 1386, 1616, 1673
AoxI GGCC 5 cut(s) 127, 440, 454, 498, 598
ApaI GGGCCC 1 cut(s) 444
ApeKI GCWGC 6 cut(s) 767, 985, 1019, 1130, 1141, 1253
ApoI RAATTY 1 cut(s) 1214
ArsI GACNNNNNNTTYG 2 cut(s) 1649, 1681
AspLEI GCGC 1 cut(s) 361
AspS9I GGNCC 5 cut(s) 440, 441, 454, 599, 1557
AsuC2I CCSGG 3 cut(s) 392, 412, 602
AsuHPI GGTGA 8 cut(s) 109, 124, 586, 641, 1055, 1376, 1559, 1715
AvaII GGWCC 1 cut(s) 1557
BaeGI GKGCMC 1 cut(s) 444
BanI GGYRCC 1 cut(s) 358
BanII GRGCYC 3 cut(s) 417, 444, 495
BbsI GAAGAC 3 cut(s) 241, 350, 454
Bbv12I GWGCWC 2 cut(s) 844, 1738
BbvI GCAGC 6 cut(s) 779, 997, 1006, 1142, 1153, 1265
BccI CCATC 7 cut(s) 186, 590, 815, 869, 1033, 1075, 1451
BceAI ACGGC 4 cut(s) 230, 335, 485, 668
BciT130I CCWGG 2 cut(s) 458, 1101
BclI TGATCA 1 cut(s) 426
BcnI CCSGG 3 cut(s) 392, 412, 602
BcoDI GTCTC 5 cut(s) 29, 71, 103, 508, 1481
BfmI CTRYAG 3 cut(s) 942, 1020, 1331
BfoI RGCGCY 1 cut(s) 362
BfrI CTTAAG 1 cut(s) 554
BglI GCCNNNNNGGC 1 cut(s) 356
BisI GCNGC 9 cut(s) 229, 336, 362, 768, 986, 1020, 1131, 1142, 1254
BlsI GCNGC 9 cut(s) 230, 337, 363, 769, 987, 1021, 1132, 1143, 1255
Bme1390I CCNGG 5 cut(s) 392, 412, 458, 602, 1101
Bme18I GGWCC 1 cut(s) 1557
BmgT120I GGNCC 5 cut(s) 440, 441, 454, 599, 1557
BmiI GGNNCC 4 cut(s) 360, 442, 1059, 1558
BmrFI CCNGG 5 cut(s) 392, 412, 458, 602, 1101
BmrI ACTGGG 2 cut(s) 498, 824
BmsI GCATC 2 cut(s) 578, 622
BmuI ACTGGG 2 cut(s) 498, 824
BpiI GAAGAC 3 cut(s) 241, 350, 454
BplI GAGNNNNNCTC 2 cut(s) 362, 394
BpmI CTGGAG 2 cut(s) 1047, 1631
BpuEI CTTGAG 1 cut(s) 953
BpuMI CCSGG 3 cut(s) 392, 412, 602
Bsa29I ATCGAT 1 cut(s) 1230
BsaAI YACGTR 1 cut(s) 642
BsaBI GATNNNNATC 1 cut(s) 1677
BsaHI GRCGYC 2 cut(s) 243, 359
BsaI GGTCTC 1 cut(s) 1481
BsaJI CCNNGG 1 cut(s) 124
BsaWI WCCGGW 1 cut(s) 1394
BsaXI ACNNNNNCTCC 4 cut(s) 201, 231, 816, 846
Bsc4I CCNNNNNNNGG 2 cut(s) 489, 1401
Bse118I RCCGGY 2 cut(s) 355, 364
Bse1I ACTGG 7 cut(s) 493, 736, 830, 1204, 1549, 1614, 1635
Bse8I GATNNNNATC 1 cut(s) 1677
BseBI CCWGG 2 cut(s) 458, 1101
BseCI ATCGAT 1 cut(s) 1230
BseDI CCNNGG 1 cut(s) 124
BseGI GGATG 3 cut(s) 69, 1003, 1090
BseJI GATNNNNATC 1 cut(s) 1677
BseLI CCNNNNNNNGG 2 cut(s) 489, 1401
BseMII CTCAG 1 cut(s) 537
BseNI ACTGG 7 cut(s) 493, 736, 830, 1204, 1549, 1614, 1635
BseRI GAGGAG 6 cut(s) 204, 303, 306, 309, 312, 315
BseSI GKGCMC 1 cut(s) 444
BseXI GCAGC 6 cut(s) 779, 997, 1006, 1142, 1153, 1265
BseYI CCCAGC 1 cut(s) 154
BsgI GTGCAG 1 cut(s) 1272
Bsh1285I CGRYCG 1 cut(s) 399
BshFI GGCC 5 cut(s) 129, 442, 456, 500, 600
BshNI GGYRCC 1 cut(s) 358
BshVI ATCGAT 1 cut(s) 1230
BsiEI CGRYCG 1 cut(s) 399
BsiHKAI GWGCWC 2 cut(s) 844, 1738
BsiSI CCGG 7 cut(s) 356, 365, 392, 411, 483, 602, 1395
BslFI GGGAC 2 cut(s) 812, 1570
BslI CCNNNNNNNGG 2 cut(s) 489, 1401
BsmAI GTCTC 5 cut(s) 29, 71, 103, 508, 1481
BsmBI CGTCTC 2 cut(s) 71, 508
BsmFI GGGAC 2 cut(s) 812, 1570
BsmI GAATGC 1 cut(s) 1203
BsnI GGCC 5 cut(s) 129, 442, 456, 500, 600
Bso31I GGTCTC 1 cut(s) 1481
Bsp120I GGGCCC 1 cut(s) 440
Bsp1286I GDGCHC 5 cut(s) 417, 444, 495, 844, 1738
Bsp1407I TGTACA 1 cut(s) 1504
Bsp143I GATC 6 cut(s) 426, 946, 1227, 1391, 1621, 1678
Bsp19I CCATGG 1 cut(s) 124
BspANI GGCC 5 cut(s) 129, 442, 456, 500, 600
BspCNI CTCAG 1 cut(s) 538
BspDI ATCGAT 1 cut(s) 1230
BspLI GGNNCC 4 cut(s) 360, 442, 1059, 1558
BspMAI CTGCAG 1 cut(s) 1024
BspPI GGATC 3 cut(s) 1386, 1616, 1673
BspT107I GGYRCC 1 cut(s) 358
BspTI CTTAAG 1 cut(s) 554
BspTNI GGTCTC 1 cut(s) 1481
BsrFI RCCGGY 2 cut(s) 355, 364
BsrGI TGTACA 1 cut(s) 1504
BsrI ACTGG 7 cut(s) 493, 736, 830, 1204, 1549, 1614, 1635
BssAI RCCGGY 2 cut(s) 355, 364
BssECI CCNNGG 1 cut(s) 124
BssMI GATC 6 cut(s) 426, 946, 1227, 1391, 1621, 1678
BssNAI GTATAC 1 cut(s) 891
BssNI GRCGYC 2 cut(s) 243, 359
BssT1I CCWWGG 1 cut(s) 124
Bst1107I GTATAC 1 cut(s) 891
Bst2UI CCWGG 2 cut(s) 458, 1101
Bst4CI ACNGT 3 cut(s) 400, 1156, 1289
Bst6I CTCTTC 3 cut(s) 228, 287, 1029
BstACI GRCGYC 2 cut(s) 243, 359
BstAFI CTTAAG 1 cut(s) 554
BstAUI TGTACA 1 cut(s) 1504
BstBAI YACGTR 1 cut(s) 642
BstC8I GCNNGC 4 cut(s) 357, 366, 444, 1651
BstDEI CTNAG 5 cut(s) 546, 1125, 1265, 1292, 1515
BstDSI CCRYGG 1 cut(s) 124
BstF5I GGATG 3 cut(s) 69, 1003, 1090
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 1 cut(s) 361
BstKTI GATC 6 cut(s) 429, 949, 1230, 1394, 1624, 1681
BstMAI GTCTC 5 cut(s) 29, 71, 103, 508, 1481
BstMBI GATC 6 cut(s) 426, 946, 1227, 1391, 1621, 1678
BstMCI CGRYCG 1 cut(s) 399
BstMWI GCNNNNNNNGC 4 cut(s) 356, 361, 365, 985
BstNI CCWGG 2 cut(s) 458, 1101
BstNSI RCATGY 2 cut(s) 919, 985
BstSCI CCNGG 5 cut(s) 390, 410, 456, 600, 1099
BstSFI CTRYAG 3 cut(s) 942, 1020, 1331
BstSLI GKGCMC 1 cut(s) 444
BstSNI TACGTA 1 cut(s) 642
BstV1I GCAGC 6 cut(s) 779, 997, 1006, 1142, 1153, 1265
BstV2I GAAGAC 3 cut(s) 241, 350, 454
BstX2I RGATCY 3 cut(s) 1391, 1621, 1678
BstYI RGATCY 3 cut(s) 1391, 1621, 1678
BstZ17I GTATAC 1 cut(s) 891
Bsu15I ATCGAT 1 cut(s) 1230
BsuRI GGCC 5 cut(s) 129, 442, 456, 500, 600
BsuTUI ATCGAT 1 cut(s) 1230
BtgI CCRYGG 1 cut(s) 124
BtgZI GCGATG 2 cut(s) 164, 1668
BtsCI GGATG 3 cut(s) 69, 1003, 1090
BtsI GCAGTG 1 cut(s) 442
BtsIMutI CAGTG 4 cut(s) 442, 486, 1152, 1642
Cac8I GCNNGC 4 cut(s) 357, 366, 444, 1651
CfoI GCGC 1 cut(s) 361
Cfr10I RCCGGY 2 cut(s) 355, 364
Cfr13I GGNCC 5 cut(s) 440, 441, 454, 599, 1557
ClaI ATCGAT 1 cut(s) 1230
CseI GACGC 1 cut(s) 251
Csp6I GTAC 1 cut(s) 1505
CspCI CAANNNNNGTGG 2 cut(s) 418, 453
CviAII CATG 7 cut(s) 125, 340, 424, 496, 916, 982, 1561
CviQI GTAC 1 cut(s) 1505
DdeI CTNAG 5 cut(s) 546, 1125, 1265, 1292, 1515
DinI GGCGCC 1 cut(s) 360
DpnI GATC 6 cut(s) 428, 948, 1229, 1393, 1623, 1680
DpnII GATC 6 cut(s) 426, 946, 1227, 1391, 1621, 1678
EaeI YGGCCR 1 cut(s) 498
Eam1104I CTCTTC 3 cut(s) 228, 287, 1029
EarI CTCTTC 3 cut(s) 228, 287, 1029
EciI GGCGGA 3 cut(s) 188, 260, 383
Eco105I TACGTA 1 cut(s) 642
Eco130I CCWWGG 1 cut(s) 124
Eco24I GRGCYC 3 cut(s) 417, 444, 495
Eco31I GGTCTC 1 cut(s) 1481
Eco47I GGWCC 1 cut(s) 1557
Eco57I CTGAAG 1 cut(s) 448
EcoRII CCWGG 2 cut(s) 456, 1099
EcoT14I CCWWGG 1 cut(s) 124
EcoT38I GRGCYC 3 cut(s) 417, 444, 495
EgeI GGCGCC 1 cut(s) 360
EheI GGCGCC 1 cut(s) 360
ErhI CCWWGG 1 cut(s) 124
Esp3I CGTCTC 2 cut(s) 71, 508
FaeI CATG 7 cut(s) 128, 343, 427, 499, 919, 985, 1564
FalI AAGNNNNNCTT 2 cut(s) 713, 745
FaqI GGGAC 2 cut(s) 812, 1570
FatI CATG 7 cut(s) 124, 339, 423, 495, 915, 981, 1560
FauI CCCGC 2 cut(s) 340, 451
FbaI TGATCA 1 cut(s) 426
FblI GTMKAC 2 cut(s) 374, 890
Fnu4HI GCNGC 9 cut(s) 229, 336, 362, 768, 986, 1020, 1131, 1142, 1254
FokI GGATG 3 cut(s) 56, 1010, 1097
FriOI GRGCYC 3 cut(s) 417, 444, 495
Fsp4HI GCNGC 9 cut(s) 229, 336, 362, 768, 986, 1020, 1131, 1142, 1254
GlaI GCGC 1 cut(s) 360
GluI GCNGC 9 cut(s) 229, 336, 362, 768, 986, 1020, 1131, 1142, 1254
GsaI CCCAGC 1 cut(s) 158
GsuI CTGGAG 2 cut(s) 1047, 1631
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 5 cut(s) 129, 442, 456, 500, 600
HapII CCGG 7 cut(s) 356, 365, 392, 411, 483, 602, 1395
HgaI GACGC 1 cut(s) 251
HhaI GCGC 1 cut(s) 361
Hin1I GRCGYC 2 cut(s) 243, 359
Hin1II CATG 7 cut(s) 128, 343, 427, 499, 919, 985, 1564
Hin6I GCGC 1 cut(s) 359
HinP1I GCGC 1 cut(s) 359
HincII GTYRAC 3 cut(s) 375, 1159, 1281
HindII GTYRAC 3 cut(s) 375, 1159, 1281
HinfI GANTC 7 cut(s) 111, 371, 825, 938, 1096, 1325, 1461
HpaII CCGG 7 cut(s) 356, 365, 392, 411, 483, 602, 1395
HphI GGTGA 8 cut(s) 109, 124, 586, 641, 1055, 1376, 1559, 1715
Hpy166II GTNNAC 5 cut(s) 375, 891, 1159, 1281, 1507
Hpy188I TCNGA 1 cut(s) 666
Hpy188III TCNNGA 8 cut(s) 403, 545, 872, 932, 1064, 1073, 1625, 1751
Hpy8I GTNNAC 5 cut(s) 375, 891, 1159, 1281, 1507
Hpy99I CGWCG 2 cut(s) 245, 1484
HpyAV CCTTC 7 cut(s) 26, 130, 535, 987, 1186, 1239, 1520
HpyCH4III ACNGT 3 cut(s) 400, 1156, 1289
HpyCH4IV ACGT 2 cut(s) 641, 1479
HpyF10VI GCNNNNNNNGC 4 cut(s) 356, 361, 365, 985
HpyF3I CTNAG 5 cut(s) 546, 1125, 1265, 1292, 1515
HpySE526I ACGT 2 cut(s) 641, 1479
Hsp92I GRCGYC 2 cut(s) 243, 359
Hsp92II CATG 7 cut(s) 128, 343, 427, 499, 919, 985, 1564
HspAI GCGC 1 cut(s) 359
KasI GGCGCC 1 cut(s) 358
KroI GCCGGC 2 cut(s) 355, 364
KroNI GCCGGC 2 cut(s) 357, 366
Ksp22I TGATCA 1 cut(s) 426
Kzo9I GATC 6 cut(s) 426, 946, 1227, 1391, 1621, 1678
LmnI GCTCC 2 cut(s) 1612, 1733
Lsp1109I GCAGC 6 cut(s) 779, 997, 1006, 1142, 1153, 1265
LweI GCATC 2 cut(s) 578, 622
MaeII ACGT 2 cut(s) 641, 1479
MaeIII GTNAC 2 cut(s) 574, 637
MalI GATC 6 cut(s) 428, 948, 1229, 1393, 1623, 1680
MboI GATC 6 cut(s) 426, 946, 1227, 1391, 1621, 1678
MboII GAAGA 9 cut(s) 215, 241, 244, 274, 355, 454, 571, 1046, 1682
MfeI CAATTG 1 cut(s) 1297
MflI RGATCY 3 cut(s) 1391, 1621, 1678
MhlI GDGCHC 5 cut(s) 417, 444, 495, 844, 1738
MluCI AATT 5 cut(s) 418, 966, 1167, 1214, 1297
Mly113I GGCGCC 1 cut(s) 359
MlyI GAGTC 3 cut(s) 105, 380, 834
MreI CGCCGGCG 1 cut(s) 364
MroNI GCCGGC 2 cut(s) 355, 364
MseI TTAA 4 cut(s) 555, 965, 1353, 1598
MslI CAYNNNNRTG 1 cut(s) 1455
MspA1I CMGCKG 2 cut(s) 988, 1133
MspCI CTTAAG 1 cut(s) 554
MspI CCGG 7 cut(s) 356, 365, 392, 411, 483, 602, 1395
MspR9I CCNGG 5 cut(s) 392, 412, 458, 602, 1101
MunI CAATTG 1 cut(s) 1297
Mva1269I GAATGC 1 cut(s) 1203
MvaI CCWGG 2 cut(s) 458, 1101
MwoI GCNNNNNNNGC 4 cut(s) 356, 361, 365, 985
NaeI GCCGGC 2 cut(s) 357, 366
NarI GGCGCC 1 cut(s) 359
NciI CCSGG 3 cut(s) 392, 412, 602
NcoI CCATGG 1 cut(s) 124
NdeII GATC 6 cut(s) 426, 946, 1227, 1391, 1621, 1678
NgoMIV GCCGGC 2 cut(s) 355, 364
NlaIII CATG 7 cut(s) 128, 343, 427, 499, 919, 985, 1564
NlaIV GGNNCC 4 cut(s) 360, 442, 1059, 1558
NmeAIII GCCGAG 1 cut(s) 955
NmuCI GTSAC 1 cut(s) 574
NspI RCATGY 2 cut(s) 919, 985
PcsI WCGNNNNNNNCGW 1 cut(s) 392
PctI GAATGC 1 cut(s) 1203
PdiI GCCGGC 2 cut(s) 357, 366
PfeI GAWTC 4 cut(s) 938, 1096, 1325, 1461
PflFI GACNNNGTC 2 cut(s) 245, 379
PfoI TCCNGGA 1 cut(s) 1099
PkrI GCNGC 9 cut(s) 230, 337, 363, 769, 987, 1021, 1132, 1143, 1255
PleI GAGTC 3 cut(s) 105, 379, 833
PluTI GGCGCC 1 cut(s) 362
PpsI GAGTC 3 cut(s) 105, 379, 833
Ppu21I YACGTR 1 cut(s) 642
Psp6I CCWGG 2 cut(s) 456, 1099
PspFI CCCAGC 1 cut(s) 154
PspGI CCWGG 2 cut(s) 456, 1099
PspN4I GGNNCC 4 cut(s) 360, 442, 1059, 1558
PspOMI GGGCCC 1 cut(s) 440
PspPI GGNCC 5 cut(s) 440, 441, 454, 599, 1557
PstI CTGCAG 1 cut(s) 1024
PsuI RGATCY 3 cut(s) 1391, 1621, 1678
PsyI GACNNNGTC 2 cut(s) 245, 379
RsaI GTAC 1 cut(s) 1506
RsaNI GTAC 1 cut(s) 1505
RseI CAYNNNNRTG 1 cut(s) 1455
SalI GTCGAC 1 cut(s) 373
SaqAI TTAA 4 cut(s) 555, 965, 1353, 1598
SatI GCNGC 9 cut(s) 229, 336, 362, 768, 986, 1020, 1131, 1142, 1254
Sau3AI GATC 6 cut(s) 426, 946, 1227, 1391, 1621, 1678
Sau96I GGNCC 5 cut(s) 440, 441, 454, 599, 1557
SchI GAGTC 3 cut(s) 105, 380, 834
ScrFI CCNGG 5 cut(s) 392, 412, 458, 602, 1101
SduI GDGCHC 5 cut(s) 417, 444, 495, 844, 1738
SfaNI GCATC 2 cut(s) 578, 622
SfcI CTRYAG 3 cut(s) 942, 1020, 1331
SfoI GGCGCC 1 cut(s) 360
SgrAI CRCCGGYG 1 cut(s) 364
SinI GGWCC 1 cut(s) 1557
SmiMI CAYNNNNRTG 1 cut(s) 1455
SmlI CTYRAG 2 cut(s) 554, 932
SmoI CTYRAG 2 cut(s) 554, 932
SnaBI TACGTA 1 cut(s) 642
Sse9I AATT 5 cut(s) 418, 966, 1167, 1214, 1297
SspDI GGCGCC 1 cut(s) 358
SspI AATATT 2 cut(s) 661, 1351
StyD4I CCNGG 5 cut(s) 390, 410, 456, 600, 1099
StyI CCWWGG 1 cut(s) 124
TaaI ACNGT 3 cut(s) 400, 1156, 1289
TaiI ACGT 2 cut(s) 644, 1482
TaqI TCGA 4 cut(s) 374, 516, 1230, 1482
TasI AATT 5 cut(s) 418, 966, 1167, 1214, 1297
TatI WGTACW 1 cut(s) 1504
TauI GCSGC 3 cut(s) 231, 338, 364
TfiI GAWTC 4 cut(s) 938, 1096, 1325, 1461
Tru1I TTAA 4 cut(s) 555, 965, 1353, 1598
Tru9I TTAA 4 cut(s) 555, 965, 1353, 1598
TscAI CASTG 4 cut(s) 442, 493, 1159, 1642
TseFI GTSAC 1 cut(s) 574
TseI GCWGC 6 cut(s) 767, 985, 1019, 1130, 1141, 1253
Tsp45I GTSAC 1 cut(s) 574
TspDTI ATGAA 5 cut(s) 356, 517, 1101, 1136, 1527
TspGWI ACGGA 2 cut(s) 53, 1204
TspRI CASTG 4 cut(s) 442, 493, 1159, 1642
Tth111I GACNNNGTC 2 cut(s) 245, 379
Vha464I CTTAAG 1 cut(s) 554
VpaK11BI GGWCC 1 cut(s) 1557
XapI RAATTY 1 cut(s) 1214
XceI RCATGY 2 cut(s) 919, 985
XmiI GTMKAC 2 cut(s) 374, 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.