RchiOBHm_Chr1g0315171

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
2350515 .. 2353590
3076 bp
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UTR
Exon/CDS
Intron
PRQ54570

Sequence Viewer

Length: 177 bp
ATGAAGGTTTATATGCGCTTATCACCTCTCCGCAAAACTGCTTTAATGGGAGTTTTTTGCTCAGCTTTCCAGGTTGGTGTATCAACATGGTGTCTTAACATGACAGGGCCGATTTTTGTATCTCTGTTCAAGCCTTTGGGGATCGTAGTTGCAGTTGCCACTGGTTTTGGAGTGTAG

Protein Analysis

58

Amino Acids

6.24

Weight (kDa)

10.06

Isoelectric Point (pI)

11.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019843)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 31
AclWI GGATC 1 cut(s) 149
AgsI TTSAA 1 cut(s) 130
AjnI CCWGG 1 cut(s) 69
AluBI AGCT 1 cut(s) 65
AluI AGCT 1 cut(s) 65
AlwI GGATC 1 cut(s) 149
AoxI GGCC 1 cut(s) 107
AspLEI GCGC 1 cut(s) 18
AspS9I GGNCC 1 cut(s) 107
AsuHPI GGTGA 1 cut(s) 15
BciT130I CCWGG 1 cut(s) 71
BlpI GCTNAGC 1 cut(s) 61
Bme1390I CCNGG 1 cut(s) 71
BmgT120I GGNCC 1 cut(s) 107
BmrFI CCNGG 1 cut(s) 71
Bpu1102I GCTNAGC 1 cut(s) 61
Bse1I ACTGG 1 cut(s) 166
BseBI CCWGG 1 cut(s) 71
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 1 cut(s) 166
BshFI GGCC 1 cut(s) 109
BsnI GGCC 1 cut(s) 109
Bsp143I GATC 1 cut(s) 141
Bsp1720I GCTNAGC 1 cut(s) 61
BspACI CCGC 1 cut(s) 31
BspANI GGCC 1 cut(s) 109
BspCNI CTCAG 1 cut(s) 74
BspPI GGATC 1 cut(s) 149
BsrI ACTGG 1 cut(s) 166
BssMI GATC 1 cut(s) 141
Bst2UI CCWGG 1 cut(s) 71
BstDEI CTNAG 1 cut(s) 61
BstHHI GCGC 1 cut(s) 18
BstKTI GATC 1 cut(s) 144
BstMBI GATC 1 cut(s) 141
BstNI CCWGG 1 cut(s) 71
BstSCI CCNGG 1 cut(s) 69
BsuRI GGCC 1 cut(s) 109
BtsIMutI CAGTG 1 cut(s) 159
CfoI GCGC 1 cut(s) 18
Cfr13I GGNCC 1 cut(s) 107
CspCI CAANNNNNGTGG 1 cut(s) 148
CviAII CATG 2 cut(s) 87, 100
CviJI RGCY 3 cut(s) 65, 109, 133
CviKI_1 RGCY 3 cut(s) 65, 109, 133
DdeI CTNAG 1 cut(s) 61
DpnI GATC 1 cut(s) 143
DpnII GATC 1 cut(s) 141
EcoRII CCWGG 1 cut(s) 69
FaeI CATG 2 cut(s) 90, 103
FaiI YATR 4 cut(s) 12, 14, 88, 101
FatI CATG 2 cut(s) 86, 99
GlaI GCGC 1 cut(s) 17
HaeIII GGCC 1 cut(s) 109
HhaI GCGC 1 cut(s) 18
Hin1II CATG 2 cut(s) 90, 103
Hin6I GCGC 1 cut(s) 16
HinP1I GCGC 1 cut(s) 16
HphI GGTGA 1 cut(s) 15
HpyCH4V TGCA 1 cut(s) 152
HpyF3I CTNAG 1 cut(s) 61
Hsp92II CATG 2 cut(s) 90, 103
HspAI GCGC 1 cut(s) 16
Kzo9I GATC 1 cut(s) 141
LpnPI CCDG 4 cut(s) 56, 83, 90, 147
MalI GATC 1 cut(s) 143
MboI GATC 1 cut(s) 141
MnlI CCTC 1 cut(s) 36
MseI TTAA 2 cut(s) 44, 96
MspR9I CCNGG 1 cut(s) 71
MvaI CCWGG 1 cut(s) 71
NdeII GATC 1 cut(s) 141
NlaIII CATG 2 cut(s) 90, 103
Psp6I CCWGG 1 cut(s) 69
PspGI CCWGG 1 cut(s) 69
PspPI GGNCC 1 cut(s) 107
SaqAI TTAA 2 cut(s) 44, 96
Sau3AI GATC 1 cut(s) 141
Sau96I GGNCC 1 cut(s) 107
ScrFI CCNGG 1 cut(s) 71
SetI ASST 4 cut(s) 9, 28, 67, 75
SgeI CNNG 6 cut(s) 82, 83, 99, 112, 117, 142
SsiI CCGC 1 cut(s) 31
StyD4I CCNGG 1 cut(s) 69
Tru1I TTAA 2 cut(s) 44, 96
Tru9I TTAA 2 cut(s) 44, 96
TscAI CASTG 1 cut(s) 166
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.