RchiOBHm_Chr1g0315261

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
2413534 .. 2418833
5300 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54579

Sequence Viewer

Length: 294 bp
ATGAAGGTTTACATGCGCTTATCACCTCTCCGCAAAACTGCTTTAAGGGGAGTTTTTGGCTCAGCTTTCCAGGTTGGTGTATCAACATGGTGTCTTAACATGACAGGGCCGATTTTTGTATCTATGTTCAAGCCTTTGGGGATCGTAGTTGCAGTTGCCACTGGTTTTGGGGTGTGGCATACTCTTCACTCTCTGGGTTCAGAAAATCTAGAAAGAAAGCACGGGCTATCTAGCTTAATTTTGAGTTTAACTACCAAAAAAGATAATTGTTGTTTATGTACTCTAATCGACTGA

Protein Analysis

97

Amino Acids

10.6

Weight (kDa)

9.56

Isoelectric Point (pI)

23.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0019843)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 31
AclWI GGATC 1 cut(s) 149
AfaI GTAC 1 cut(s) 280
AgsI TTSAA 1 cut(s) 130
AjnI CCWGG 1 cut(s) 69
AluBI AGCT 2 cut(s) 65, 234
AluI AGCT 2 cut(s) 65, 234
AlwI GGATC 1 cut(s) 149
AoxI GGCC 1 cut(s) 107
AspLEI GCGC 1 cut(s) 18
AspS9I GGNCC 1 cut(s) 107
AsuHPI GGTGA 1 cut(s) 15
BciT130I CCWGG 1 cut(s) 71
BfaI CTAG 2 cut(s) 209, 231
BlpI GCTNAGC 1 cut(s) 61
Bme1390I CCNGG 1 cut(s) 71
BmgT120I GGNCC 1 cut(s) 107
BmrFI CCNGG 1 cut(s) 71
Bpu1102I GCTNAGC 1 cut(s) 61
Bse1I ACTGG 1 cut(s) 166
BseBI CCWGG 1 cut(s) 71
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 1 cut(s) 166
BshFI GGCC 1 cut(s) 109
BsnI GGCC 1 cut(s) 109
Bsp143I GATC 1 cut(s) 141
Bsp1720I GCTNAGC 1 cut(s) 61
BspACI CCGC 1 cut(s) 31
BspANI GGCC 1 cut(s) 109
BspCNI CTCAG 1 cut(s) 74
BspPI GGATC 1 cut(s) 149
BsrI ACTGG 1 cut(s) 166
BssMI GATC 1 cut(s) 141
Bst2UI CCWGG 1 cut(s) 71
Bst6I CTCTTC 1 cut(s) 189
BstDEI CTNAG 1 cut(s) 61
BstHHI GCGC 1 cut(s) 18
BstKTI GATC 1 cut(s) 144
BstMBI GATC 1 cut(s) 141
BstNI CCWGG 1 cut(s) 71
BstNSI RCATGY 1 cut(s) 16
BstSCI CCNGG 1 cut(s) 69
BsuRI GGCC 1 cut(s) 109
BtsIMutI CAGTG 1 cut(s) 159
CfoI GCGC 1 cut(s) 18
Cfr13I GGNCC 1 cut(s) 107
Csp6I GTAC 1 cut(s) 279
CspCI CAANNNNNGTGG 2 cut(s) 148, 183
CviAII CATG 3 cut(s) 13, 87, 100
CviJI RGCY 6 cut(s) 60, 65, 109, 133, 226, 234
CviKI_1 RGCY 6 cut(s) 60, 65, 109, 133, 226, 234
CviQI GTAC 1 cut(s) 279
DdeI CTNAG 1 cut(s) 61
DpnI GATC 1 cut(s) 143
DpnII GATC 1 cut(s) 141
Eam1104I CTCTTC 1 cut(s) 189
EarI CTCTTC 1 cut(s) 189
EcoRII CCWGG 1 cut(s) 69
FaeI CATG 3 cut(s) 16, 90, 103
FaiI YATR 6 cut(s) 14, 88, 101, 125, 180, 277
FatI CATG 3 cut(s) 12, 86, 99
FspBI CTAG 2 cut(s) 209, 231
GlaI GCGC 1 cut(s) 17
HaeIII GGCC 1 cut(s) 109
HhaI GCGC 1 cut(s) 18
Hin1II CATG 3 cut(s) 16, 90, 103
Hin6I GCGC 1 cut(s) 16
HinP1I GCGC 1 cut(s) 16
HphI GGTGA 1 cut(s) 15
Hpy166II GTNNAC 1 cut(s) 10
Hpy188I TCNGA 1 cut(s) 202
Hpy188III TCNNGA 1 cut(s) 209
Hpy8I GTNNAC 1 cut(s) 10
HpyCH4V TGCA 1 cut(s) 152
HpyF3I CTNAG 1 cut(s) 61
Hsp92II CATG 3 cut(s) 16, 90, 103
HspAI GCGC 1 cut(s) 16
Kzo9I GATC 1 cut(s) 141
LpnPI CCDG 5 cut(s) 56, 83, 90, 147, 179
MaeI CTAG 2 cut(s) 209, 231
MalI GATC 1 cut(s) 143
MboI GATC 1 cut(s) 141
MboII GAAGA 1 cut(s) 176
MluCI AATT 2 cut(s) 237, 265
MnlI CCTC 1 cut(s) 36
MseI TTAA 4 cut(s) 44, 96, 236, 248
MspR9I CCNGG 1 cut(s) 71
MvaI CCWGG 1 cut(s) 71
NdeII GATC 1 cut(s) 141
NlaIII CATG 3 cut(s) 16, 90, 103
NspI RCATGY 1 cut(s) 16
Psp6I CCWGG 1 cut(s) 69
PspGI CCWGG 1 cut(s) 69
PspPI GGNCC 1 cut(s) 107
RsaI GTAC 1 cut(s) 280
RsaNI GTAC 1 cut(s) 279
SaqAI TTAA 4 cut(s) 44, 96, 236, 248
Sau3AI GATC 1 cut(s) 141
Sau96I GGNCC 1 cut(s) 107
ScrFI CCNGG 1 cut(s) 71
SetI ASST 5 cut(s) 9, 28, 67, 75, 236
Sse9I AATT 2 cut(s) 237, 265
SsiI CCGC 1 cut(s) 31
SspMI CTAG 2 cut(s) 209, 231
StyD4I CCNGG 1 cut(s) 69
TaqI TCGA 1 cut(s) 288
TasI AATT 2 cut(s) 237, 265
TatI WGTACW 1 cut(s) 278
Tru1I TTAA 4 cut(s) 44, 96, 236, 248
Tru9I TTAA 4 cut(s) 44, 96, 236, 248
TscAI CASTG 1 cut(s) 166
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 166
XbaI TCTAGA 1 cut(s) 208
XceI RCATGY 1 cut(s) 16
XspI CTAG 2 cut(s) 209, 231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.