RchiOBHm_Chr1g0329681
MYB Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0004354
Physical Location & Seq
Forward (+)
19430279 .. 19435660
5382 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55895

Sequence Viewer

Length: 1680 bp
ATGAGTCGAACAACAACTGACAGTGAAGATGGACTGCTGTCTAAGGATCAAATTGAGTCACCATTAATGGATGAGAGTAATGGAGGAATTGGAAATGGCGGAATTGTTCTAAAGAAAGGGCCATGGACATCGGCCGAAGATGCAATTTTGGTGGAGTATGTTAAGAAGCATGGGGAAGGAAACTGGAATGCTGTTCAGAAGCACTCAGGACTGTTCCGCTGTGGCAAAAGCTGCCGTCTGCGATGGGCAAATCACCTAAGGCCGAATCTGAAGAAAGGGGCATTCACACCAGAAGAAGAACGTTTGATTGTTGAACTCCATGCAAAGATGGGAAACAAATGGGCGCGAATGGCGGCACATTTACCTGGCCGTACGGATAATGAGATAAAGAATTACTGGAATACCAGAATTAAGCGACGTCAGCGAGCTGGCTTGCCACTTTATCCTCCTGAGGTCTGTTTGCAAGCATTGCAGGAGAGTCAACAAGGCCAGTCCAGTGGTGCACTTAATGGCACAGACACAGCACATCATGATTCTCTGCAAACTAACAGTTACGAGATACCTGATGTTGTATTTGACAGTTTGAAAGGGAACAGTTGTGTCTTACCTTATGTTCCTGAGCTTCCTGATATCTCTGCAAGTGGCATGCTGATGAAAGGCCTTGGTTCTTCTCCATATTGTGGTTTTATGCCACCAACAATGCATCGCCAAAAGCGTCCTCGAGAATCAACGGCTTTATTCCCTACTTCCGGTGGTAGCTATAAAGATGGTTTTCCCCAGTTCGACCAATTTGAAAATGATGCTGACAGAGTTGCTCGATCATATGGGTTGTCTTTTCCTCATGATCCTGATCCTACCACCAAGAGTCCACTTTCTTTTGGTGTAATTCAAGGTAGCCATTCCCTTTCAAATGGCAATTCTTCTGCTTCCAAACCCACTTGTGGGGCTGTGAAGCTGGAGCTCCCTTCACTCCAATATCCAGAAACTGATTTAGGTAGCTGGAGCACTTCTCCTCCTCCACCCTTACTTGAATCAATTGATAATTTTATCCAGTCTCCTCCACCTGTTGGTGCATTTGAGTCAGATTGCGCCTCACCACGTAACAGTGGACTGCTAGATGCTTTACTTTATGAGGCAAAGACTCTCGGTAGTACAAAGAATCATTCAACCGACAAGAGTTCAAATTCATCTAGTGTTACTCCTGGGGAAGTGGCTGACAGTTCCACATTGAATGTTTGCGAGACAGAATGGGAAGAATATGGCGACCCAATTTCTCCATTGGGTCATTCTGCTACTTCGCTGTTCAGTGAGTGCACTCCTATCAGTGCCAGTGGAAGTTCATTGGAGGAAGTGCCACCTGCTGAGACCCTTACTGGATCCAATGTGAAACCTGAACCAGCTGACCACGCTTGGACACCTGAGGAACAAAAAGAAGCTTCACCTCCATTGGATTATACTCGTCCTGATGCGTTACTTGGTTCAGATTGGCTTGAGCCAAGTACTGGGTTTAAAGACCAATCAATCATGAATGATGCGATTGCATCACTTCTCGGTGAGGATTTGGCCACTGACTACAAGCACATGGCTTCTGGAACGTCTACATCAAATCAAGGGTGGGGTCTTGGTTCTTGCCCGTGGAACAACATGCCTGCCGTCTGTCAAATGACGGATCTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007033 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008285 GO:0009555 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009739 GO:0009740 GO:0009751 GO:0009755 GO:0009787 GO:0009789 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0014070 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033993 GO:0040008 GO:0042127 GO:0042221 GO:0042493 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045926 GO:0045935 GO:0046677 GO:0048229 GO:0048232 GO:0048235 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048466 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048608 GO:0048609 GO:0048653 GO:0048654 GO:0048655 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051716 GO:0055046 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071840 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1905957 GO:1905959 GO:1990019 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

559

Amino Acids

60.42

Weight (kDa)

5.01

Isoelectric Point (pI)

52.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 39 - 86 1e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 42 - 101 6.8e-15 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 92 - 135 9.7e-18 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 95 - 139 1.4e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1366
AatII GACGTC 1 cut(s) 421
Acc36I ACCTGC 1 cut(s) 1366
AccB7I CCANNNNNTGG 3 cut(s) 680, 1067, 1502
AccI GTMKAC 1 cut(s) 1598
AccII CGCG 1 cut(s) 346
AciI CCGC 3 cut(s) 99, 217, 353
AclI AACGTT 1 cut(s) 301
AclWI GGATC 6 cut(s) 54, 839, 845, 1371, 1384, 1677
AcoI YGGCCR 3 cut(s) 132, 367, 1563
AcsI RAATTY 1 cut(s) 1183
AcuI CTGAAG 1 cut(s) 290
AcyI GRCGYC 1 cut(s) 418
AfaI GTAC 3 cut(s) 373, 1153, 1501
AfiI CCNNNNNNNGG 6 cut(s) 680, 749, 941, 942, 1067, 1502
AgsI TTSAA 9 cut(s) 314, 586, 794, 890, 909, 1031, 1167, 1182, 1231
AjnI CCWGG 2 cut(s) 364, 1201
AluBI AGCT 9 cut(s) 231, 428, 622, 759, 955, 961, 999, 1400, 1436
AluI AGCT 9 cut(s) 231, 428, 622, 759, 955, 961, 999, 1400, 1436
Alw21I GWGCWC 4 cut(s) 505, 963, 1007, 1316
Alw26I GTCTC 3 cut(s) 1059, 1235, 1358
Alw44I GTGCAC 2 cut(s) 501, 1312
AlwI GGATC 6 cut(s) 54, 839, 845, 1371, 1384, 1677
AlwNI CAGNNNCTG 1 cut(s) 986
Ama87I CYCGRG 1 cut(s) 720
AoxI GGCC 7 cut(s) 119, 132, 260, 367, 487, 658, 1563
ApaLI GTGCAC 2 cut(s) 501, 1312
ApeKI GCWGC 1 cut(s) 231
ApoI RAATTY 1 cut(s) 1183
AseI ATTAAT 1 cut(s) 65
AspLEI GCGC 2 cut(s) 346, 1091
AspS9I GGNCC 1 cut(s) 119
AsuHPI GGTGA 5 cut(s) 51, 245, 1086, 1431, 1565
AvaI CYCGRG 1 cut(s) 720
AxyI CCTNAGG 3 cut(s) 257, 450, 1419
BaeGI GKGCMC 2 cut(s) 505, 1316
BalI TGGCCA 1 cut(s) 1565
BamHI GGATCC 1 cut(s) 1376
BanII GRGCYC 1 cut(s) 963
Bbv12I GWGCWC 4 cut(s) 505, 963, 1007, 1316
BbvI GCAGC 1 cut(s) 218
BccI CCATC 4 cut(s) 23, 237, 322, 761
BceAI ACGGC 4 cut(s) 219, 354, 747, 1637
BciT130I CCWGG 2 cut(s) 366, 1203
BcoDI GTCTC 3 cut(s) 1059, 1235, 1358
BfaI CTAG 2 cut(s) 1115, 1191
BfuAI ACCTGC 1 cut(s) 1366
BisI GCNGC 2 cut(s) 232, 354
BlsI GCNGC 2 cut(s) 233, 355
BmcAI AGTACT 1 cut(s) 1501
Bme1390I CCNGG 2 cut(s) 366, 1203
BmeT110I CYCGRG 1 cut(s) 720
BmgT120I GGNCC 1 cut(s) 119
BmiI GGNNCC 1 cut(s) 1378
BmrFI CCNGG 2 cut(s) 366, 1203
BmrI ACTGGG 2 cut(s) 772, 1512
BmsI GCATC 7 cut(s) 130, 712, 790, 1108, 1456, 1522, 1550
BmuI ACTGGG 2 cut(s) 772, 1512
BoxI GACNNNNGTC 1 cut(s) 37
BplI GAGNNNNNCTC 2 cut(s) 994, 1026
BpmI CTGGAG 2 cut(s) 977, 1021
Bpu10I CCTNAGC 1 cut(s) 618
BpuEI CTTGAG 1 cut(s) 1511
BsaAI YACGTR 1 cut(s) 1100
BsaBI GATNNNNATC 1 cut(s) 849
BsaHI GRCGYC 1 cut(s) 418
BsaI GGTCTC 1 cut(s) 1358
BsaJI CCNNGG 4 cut(s) 122, 661, 1202, 1634
BsaWI WCCGGW 1 cut(s) 749
BsaXI ACNNNNNCTCC 2 cut(s) 997, 1027
Bsc4I CCNNNNNNNGG 6 cut(s) 680, 749, 941, 942, 1067, 1502
Bse1I ACTGG 9 cut(s) 188, 401, 490, 495, 778, 1051, 1329, 1378, 1507
Bse21I CCTNAGG 3 cut(s) 257, 450, 1419
Bse3DI GCAATG 1 cut(s) 467
Bse8I GATNNNNATC 1 cut(s) 849
BseBI CCWGG 2 cut(s) 366, 1203
BseDI CCNNGG 4 cut(s) 122, 661, 1202, 1634
BseGI GGATG 1 cut(s) 76
BseJI GATNNNNATC 1 cut(s) 849
BseLI CCNNNNNNNGG 6 cut(s) 680, 749, 941, 942, 1067, 1502
BseMI GCAATG 1 cut(s) 467
BseMII CTCAG 5 cut(s) 219, 441, 609, 1353, 1410
BseNI ACTGG 9 cut(s) 188, 401, 490, 495, 778, 1051, 1329, 1378, 1507
BseRI GAGGAG 3 cut(s) 1002, 1005, 1047
BseSI GKGCMC 2 cut(s) 505, 1316
BseX3I CGGCCG 1 cut(s) 132
BseXI GCAGC 1 cut(s) 218
Bsh1236I CGCG 1 cut(s) 346
Bsh1285I CGRYCG 1 cut(s) 135
BshFI GGCC 7 cut(s) 121, 134, 262, 369, 489, 660, 1565
BsiEI CGRYCG 1 cut(s) 135
BsiHKAI GWGCWC 4 cut(s) 505, 963, 1007, 1316
BsiHKCI CYCGRG 1 cut(s) 720
BsiSI CCGG 1 cut(s) 750
BsiWI CGTACG 1 cut(s) 371
BslI CCNNNNNNNGG 6 cut(s) 680, 749, 941, 942, 1067, 1502
BsmAI GTCTC 3 cut(s) 1059, 1235, 1358
BsmI GAATGC 2 cut(s) 193, 281
BsnI GGCC 7 cut(s) 121, 134, 262, 369, 489, 660, 1565
Bso31I GGTCTC 1 cut(s) 1358
BsoBI CYCGRG 1 cut(s) 720
Bsp1286I GDGCHC 4 cut(s) 505, 963, 1007, 1316
Bsp143I GATC 6 cut(s) 46, 818, 844, 850, 1376, 1669
Bsp19I CCATGG 1 cut(s) 122
BspACI CCGC 3 cut(s) 99, 217, 353
BspANI GGCC 7 cut(s) 121, 134, 262, 369, 489, 660, 1565
BspCNI CTCAG 5 cut(s) 218, 442, 610, 1354, 1411
BspFNI CGCG 1 cut(s) 346
BspHI TCATGA 3 cut(s) 529, 841, 1524
BspLI GGNNCC 1 cut(s) 1378
BspMI ACCTGC 1 cut(s) 1366
BspPI GGATC 6 cut(s) 54, 839, 845, 1371, 1384, 1677
BspTNI GGTCTC 1 cut(s) 1358
BsrDI GCAATG 1 cut(s) 467
BsrI ACTGG 9 cut(s) 188, 401, 490, 495, 778, 1051, 1329, 1378, 1507
BssECI CCNNGG 4 cut(s) 122, 661, 1202, 1634
BssMI GATC 6 cut(s) 46, 818, 844, 850, 1376, 1669
BssNI GRCGYC 1 cut(s) 418
BssT1I CCWWGG 2 cut(s) 122, 661
Bst2UI CCWGG 2 cut(s) 366, 1203
Bst4CI ACNGT 7 cut(s) 23, 213, 551, 581, 596, 1106, 1220
BstACI GRCGYC 1 cut(s) 418
BstAPI GCANNNNNTGC 2 cut(s) 231, 469
BstBAI YACGTR 1 cut(s) 1100
BstC8I GCNNGC 6 cut(s) 426, 430, 434, 465, 647, 1650
BstDEI CTNAG 7 cut(s) 42, 205, 257, 450, 618, 1362, 1419
BstDSI CCRYGG 2 cut(s) 122, 1634
BstF5I GGATG 1 cut(s) 76
BstFNI CGCG 1 cut(s) 346
BstHHI GCGC 2 cut(s) 346, 1091
BstKTI GATC 6 cut(s) 49, 821, 847, 853, 1379, 1672
BstMAI GTCTC 3 cut(s) 1059, 1235, 1358
BstMBI GATC 6 cut(s) 46, 818, 844, 850, 1376, 1669
BstMCI CGRYCG 1 cut(s) 135
BstMWI GCNNNNNNNGC 6 cut(s) 140, 231, 350, 421, 469, 1406
BstNI CCWGG 2 cut(s) 366, 1203
BstNSI RCATGY 2 cut(s) 649, 1648
BstPAI GACNNNNGTC 1 cut(s) 37
BstSCI CCNGG 2 cut(s) 364, 1201
BstSLI GKGCMC 2 cut(s) 505, 1316
BstUI CGCG 1 cut(s) 346
BstV1I GCAGC 1 cut(s) 218
BstX2I RGATCY 2 cut(s) 1376, 1669
BstXI CCANNNNNNTGG 1 cut(s) 497
BstYI RGATCY 2 cut(s) 1376, 1669
BstZI CGGCCG 1 cut(s) 132
Bsu36I CCTNAGG 3 cut(s) 257, 450, 1419
BsuRI GGCC 7 cut(s) 121, 134, 262, 369, 489, 660, 1565
BtgI CCRYGG 2 cut(s) 122, 1634
BtgZI GCGATG 2 cut(s) 256, 689
BtsCI GGATG 1 cut(s) 76
BtsIMutI CAGTG 7 cut(s) 28, 502, 1111, 1312, 1330, 1336, 1566
BveI ACCTGC 1 cut(s) 1366
Cac8I GCNNGC 6 cut(s) 426, 430, 434, 465, 647, 1650
CaiI CAGNNNCTG 1 cut(s) 986
CciI TCATGA 3 cut(s) 529, 841, 1524
CfoI GCGC 2 cut(s) 346, 1091
Cfr13I GGNCC 1 cut(s) 119
CseI GACGC 1 cut(s) 704
Csp6I GTAC 3 cut(s) 372, 1152, 1500
CspCI CAANNNNNGTGG 2 cut(s) 132, 167
CviAII CATG 9 cut(s) 123, 170, 320, 530, 646, 842, 1525, 1582, 1645
CviQI GTAC 3 cut(s) 372, 1152, 1500
DdeI CTNAG 7 cut(s) 42, 205, 257, 450, 618, 1362, 1419
DpnI GATC 6 cut(s) 48, 820, 846, 852, 1378, 1671
DpnII GATC 6 cut(s) 46, 818, 844, 850, 1376, 1669
DraI TTTAAA 1 cut(s) 1510
EaeI YGGCCR 3 cut(s) 132, 367, 1563
EagI CGGCCG 1 cut(s) 132
EciI GGCGGA 1 cut(s) 114
Ecl136II GAGCTC 1 cut(s) 961
EclXI CGGCCG 1 cut(s) 132
Eco130I CCWWGG 2 cut(s) 122, 661
Eco147I AGGCCT 1 cut(s) 660
Eco24I GRGCYC 1 cut(s) 963
Eco31I GGTCTC 1 cut(s) 1358
Eco32I GATATC 1 cut(s) 631
Eco52I CGGCCG 1 cut(s) 132
Eco53kI GAGCTC 1 cut(s) 961
Eco57I CTGAAG 1 cut(s) 290
Eco81I CCTNAGG 3 cut(s) 257, 450, 1419
Eco88I CYCGRG 1 cut(s) 720
EcoICRI GAGCTC 1 cut(s) 961
EcoRII CCWGG 2 cut(s) 364, 1201
EcoRV GATATC 1 cut(s) 631
EcoT14I CCWWGG 2 cut(s) 122, 661
EcoT22I ATGCAT 1 cut(s) 705
EcoT38I GRGCYC 1 cut(s) 963
ErhI CCWWGG 2 cut(s) 122, 661
FaeI CATG 9 cut(s) 126, 173, 323, 533, 649, 845, 1528, 1585, 1648
FatI CATG 9 cut(s) 122, 169, 319, 529, 645, 841, 1524, 1581, 1644
FauNDI CATATG 1 cut(s) 823
FblI GTMKAC 1 cut(s) 1598
Fnu4HI GCNGC 2 cut(s) 232, 354
FokI GGATG 1 cut(s) 83
FriOI GRGCYC 1 cut(s) 963
Fsp4HI GCNGC 2 cut(s) 232, 354
FspBI CTAG 2 cut(s) 1115, 1191
GlaI GCGC 2 cut(s) 345, 1090
GluI GCNGC 2 cut(s) 232, 354
GsuI CTGGAG 2 cut(s) 977, 1021
HaeIII GGCC 7 cut(s) 121, 134, 262, 369, 489, 660, 1565
HapII CCGG 1 cut(s) 750
HgaI GACGC 1 cut(s) 704
HhaI GCGC 2 cut(s) 346, 1091
Hin1I GRCGYC 1 cut(s) 418
Hin1II CATG 9 cut(s) 126, 173, 323, 533, 649, 845, 1528, 1585, 1648
Hin6I GCGC 2 cut(s) 344, 1089
HinP1I GCGC 2 cut(s) 344, 1089
HincII GTYRAC 1 cut(s) 482
HindII GTYRAC 1 cut(s) 482
HindIII AAGCTT 1 cut(s) 1434
HpaII CCGG 1 cut(s) 750
HphI GGTGA 5 cut(s) 51, 245, 1086, 1431, 1565
Hpy166II GTNNAC 6 cut(s) 482, 503, 869, 1109, 1314, 1599
Hpy188I TCNGA 4 cut(s) 198, 270, 1084, 1483
Hpy8I GTNNAC 6 cut(s) 482, 503, 869, 1109, 1314, 1599
Hpy99I CGWCG 1 cut(s) 420
HpyAV CCTTC 2 cut(s) 170, 975
HpyCH4III ACNGT 7 cut(s) 23, 213, 551, 581, 596, 1106, 1220
HpyCH4IV ACGT 4 cut(s) 301, 418, 1099, 1595
HpyF10VI GCNNNNNNNGC 6 cut(s) 140, 231, 350, 421, 469, 1406
HpyF3I CTNAG 7 cut(s) 42, 205, 257, 450, 618, 1362, 1419
HpySE526I ACGT 4 cut(s) 301, 418, 1099, 1595
Hsp92I GRCGYC 1 cut(s) 418
Hsp92II CATG 9 cut(s) 126, 173, 323, 533, 649, 845, 1528, 1585, 1648
HspAI GCGC 2 cut(s) 344, 1089
Kzo9I GATC 6 cut(s) 46, 818, 844, 850, 1376, 1669
LmnI GCTCC 3 cut(s) 958, 966, 1002
Lsp1109I GCAGC 1 cut(s) 218
LweI GCATC 7 cut(s) 130, 712, 790, 1108, 1456, 1522, 1550
MaeI CTAG 2 cut(s) 1115, 1191
MaeII ACGT 4 cut(s) 301, 418, 1099, 1595
MaeIII GTNAC 5 cut(s) 57, 551, 1100, 1195, 1470
MalI GATC 6 cut(s) 48, 820, 846, 852, 1378, 1671
MboI GATC 6 cut(s) 46, 818, 844, 850, 1376, 1669
MboII GAAGA 9 cut(s) 38, 149, 283, 305, 308, 660, 912, 1265, 1664
MfeI CAATTG 1 cut(s) 1035
MflI RGATCY 2 cut(s) 1376, 1669
MhlI GDGCHC 4 cut(s) 505, 963, 1007, 1316
MlsI TGGCCA 1 cut(s) 1565
MluNI TGGCCA 1 cut(s) 1565
MlyI GAGTC 6 cut(s) 13, 65, 487, 874, 1088, 1135
Mox20I TGGCCA 1 cut(s) 1565
Mph1103I ATGCAT 1 cut(s) 705
MscI TGGCCA 1 cut(s) 1565
MseI TTAA 5 cut(s) 65, 162, 411, 507, 1509
MslI CAYNNNNRTG 1 cut(s) 650
Msp20I TGGCCA 1 cut(s) 1565
MspA1I CMGCKG 2 cut(s) 219, 1400
MspI CCGG 1 cut(s) 750
MspR9I CCNGG 2 cut(s) 366, 1203
MunI CAATTG 1 cut(s) 1035
Mva1269I GAATGC 2 cut(s) 193, 281
MvaI CCWGG 2 cut(s) 366, 1203
MvnI CGCG 1 cut(s) 346
MwoI GCNNNNNNNGC 6 cut(s) 140, 231, 350, 421, 469, 1406
NcoI CCATGG 1 cut(s) 122
NdeI CATATG 1 cut(s) 823
NdeII GATC 6 cut(s) 46, 818, 844, 850, 1376, 1669
NlaIII CATG 9 cut(s) 126, 173, 323, 533, 649, 845, 1528, 1585, 1648
NlaIV GGNNCC 1 cut(s) 1378
NmuCI GTSAC 1 cut(s) 57
NsiI ATGCAT 1 cut(s) 705
NspI RCATGY 2 cut(s) 649, 1648
PaeI GCATGC 1 cut(s) 649
PaeR7I CTCGAG 1 cut(s) 720
PagI TCATGA 3 cut(s) 529, 841, 1524
PaqCI CACCTGC 1 cut(s) 1366
PceI AGGCCT 1 cut(s) 660
PcsI WCGNNNNNNNCGW 1 cut(s) 712
PctI GAATGC 2 cut(s) 193, 281
PfeI GAWTC 5 cut(s) 265, 533, 725, 1031, 1159
Pfl23II CGTACG 1 cut(s) 371
PflMI CCANNNNNTGG 3 cut(s) 680, 1067, 1502
PkrI GCNGC 2 cut(s) 233, 355
PleI GAGTC 6 cut(s) 12, 64, 486, 873, 1087, 1135
PpsI GAGTC 6 cut(s) 12, 64, 486, 873, 1087, 1135
Ppu21I YACGTR 1 cut(s) 1100
PshAI GACNNNNGTC 1 cut(s) 37
PshBI ATTAAT 1 cut(s) 65
Psp124BI GAGCTC 1 cut(s) 963
Psp1406I AACGTT 1 cut(s) 301
Psp6I CCWGG 2 cut(s) 364, 1201
PspGI CCWGG 2 cut(s) 364, 1201
PspLI CGTACG 1 cut(s) 371
PspN4I GGNNCC 1 cut(s) 1378
PspPI GGNCC 1 cut(s) 119
PstNI CAGNNNCTG 1 cut(s) 986
PsuI RGATCY 2 cut(s) 1376, 1669
PvuII CAGCTG 1 cut(s) 1400
RsaI GTAC 3 cut(s) 373, 1153, 1501
RsaNI GTAC 3 cut(s) 372, 1152, 1500
RseI CAYNNNNRTG 1 cut(s) 650
SacI GAGCTC 1 cut(s) 963
SaqAI TTAA 5 cut(s) 65, 162, 411, 507, 1509
SatI GCNGC 2 cut(s) 232, 354
Sau3AI GATC 6 cut(s) 46, 818, 844, 850, 1376, 1669
Sau96I GGNCC 1 cut(s) 119
ScaI AGTACT 1 cut(s) 1501
SchI GAGTC 6 cut(s) 13, 65, 487, 874, 1088, 1135
ScrFI CCNGG 2 cut(s) 366, 1203
SduI GDGCHC 4 cut(s) 505, 963, 1007, 1316
SfaNI GCATC 7 cut(s) 130, 712, 790, 1108, 1456, 1522, 1550
Sfr274I CTCGAG 1 cut(s) 720
SlaI CTCGAG 1 cut(s) 720
SmiMI CAYNNNNRTG 1 cut(s) 650
SmlI CTYRAG 2 cut(s) 720, 1490
SmoI CTYRAG 2 cut(s) 720, 1490
SphI GCATGC 1 cut(s) 649
SseBI AGGCCT 1 cut(s) 660
SsiI CCGC 3 cut(s) 99, 217, 353
SspMI CTAG 2 cut(s) 1115, 1191
SstI GAGCTC 1 cut(s) 963
StuI AGGCCT 1 cut(s) 660
StyD4I CCNGG 2 cut(s) 364, 1201
StyI CCWWGG 2 cut(s) 122, 661
TaaI ACNGT 7 cut(s) 23, 213, 551, 581, 596, 1106, 1220
TaiI ACGT 4 cut(s) 304, 421, 1102, 1598
TaqI TCGA 4 cut(s) 7, 721, 783, 817
TatI WGTACW 2 cut(s) 1151, 1499
TauI GCSGC 1 cut(s) 356
TfiI GAWTC 5 cut(s) 265, 533, 725, 1031, 1159
Tru1I TTAA 5 cut(s) 65, 162, 411, 507, 1509
Tru9I TTAA 5 cut(s) 65, 162, 411, 507, 1509
TscAI CASTG 7 cut(s) 28, 502, 1111, 1312, 1330, 1336, 1573
TseFI GTSAC 1 cut(s) 57
TseI GCWGC 1 cut(s) 231
Tsp45I GTSAC 1 cut(s) 57
TspDTI ATGAA 4 cut(s) 668, 1176, 1329, 1541
TspGWI ACGGA 1 cut(s) 389
TspRI CASTG 7 cut(s) 28, 502, 1111, 1312, 1330, 1336, 1573
Van91I CCANNNNNTGG 3 cut(s) 680, 1067, 1502
VneI GTGCAC 2 cut(s) 501, 1312
VspI ATTAAT 1 cut(s) 65
XapI RAATTY 1 cut(s) 1183
XceI RCATGY 2 cut(s) 649, 1648
XhoI CTCGAG 1 cut(s) 720
XmiI GTMKAC 1 cut(s) 1598
XspI CTAG 2 cut(s) 1115, 1191
ZraI GACGTC 1 cut(s) 419
ZrmI AGTACT 1 cut(s) 1501
Zsp2I ATGCAT 1 cut(s) 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.