TVP38 TMEM64 family membrane protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0376751 |
| rosa_laevigata | RLG00000002423 RLG00000025737 |
| rosa_roxburghii | Rroxscaffold_3G00237280 |
| rosa_samantha | Rh4BG153200 Rh5BG374400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 92 |
| AclWI | GGATC | 1 cut(s) | 120 |
| AcsI | RAATTY | 1 cut(s) | 72 |
| AfaI | GTAC | 1 cut(s) | 107 |
| AgsI | TTSAA | 2 cut(s) | 133, 155 |
| AluBI | AGCT | 1 cut(s) | 178 |
| AluI | AGCT | 1 cut(s) | 178 |
| Alw21I | GWGCWC | 1 cut(s) | 162 |
| AlwI | GGATC | 1 cut(s) | 120 |
| ApoI | RAATTY | 1 cut(s) | 72 |
| AspLEI | GCGC | 1 cut(s) | 33 |
| Bbv12I | GWGCWC | 1 cut(s) | 162 |
| BfaI | CTAG | 1 cut(s) | 229 |
| BfmI | CTRYAG | 1 cut(s) | 173 |
| BfoI | RGCGCY | 1 cut(s) | 34 |
| BisI | GCNGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 1 cut(s) | 94 |
| BmiI | GGNNCC | 1 cut(s) | 216 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 162, 192, 199, 229 |
| BseYI | CCCAGC | 1 cut(s) | 95 |
| BsiHKAI | GWGCWC | 1 cut(s) | 162 |
| Bsp1286I | GDGCHC | 1 cut(s) | 162 |
| Bsp1407I | TGTACA | 1 cut(s) | 105 |
| Bsp143I | GATC | 1 cut(s) | 112 |
| BspACI | CCGC | 1 cut(s) | 92 |
| BspLI | GGNNCC | 1 cut(s) | 216 |
| BspPI | GGATC | 1 cut(s) | 120 |
| BsrGI | TGTACA | 1 cut(s) | 105 |
| BssMI | GATC | 1 cut(s) | 112 |
| BstAUI | TGTACA | 1 cut(s) | 105 |
| BstH2I | RGCGCY | 1 cut(s) | 34 |
| BstHHI | GCGC | 1 cut(s) | 33 |
| BstKTI | GATC | 1 cut(s) | 115 |
| BstMBI | GATC | 1 cut(s) | 112 |
| BstSFI | CTRYAG | 1 cut(s) | 173 |
| CfoI | GCGC | 1 cut(s) | 33 |
| Csp6I | GTAC | 1 cut(s) | 106 |
| CviJI | RGCY | 4 cut(s) | 57, 95, 178, 215 |
| CviKI_1 | RGCY | 4 cut(s) | 57, 95, 178, 215 |
| CviQI | GTAC | 1 cut(s) | 106 |
| DpnI | GATC | 1 cut(s) | 114 |
| DpnII | GATC | 1 cut(s) | 112 |
| FaiI | YATR | 1 cut(s) | 212 |
| Fnu4HI | GCNGC | 1 cut(s) | 93 |
| Fsp4HI | GCNGC | 1 cut(s) | 93 |
| FspBI | CTAG | 1 cut(s) | 229 |
| GlaI | GCGC | 1 cut(s) | 32 |
| GluI | GCNGC | 1 cut(s) | 93 |
| GsaI | CCCAGC | 1 cut(s) | 99 |
| HaeII | RGCGCY | 1 cut(s) | 34 |
| HhaI | GCGC | 1 cut(s) | 33 |
| Hin6I | GCGC | 1 cut(s) | 31 |
| HinP1I | GCGC | 1 cut(s) | 31 |
| HinfI | GANTC | 2 cut(s) | 133, 145 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| HpyAV | CCTTC | 1 cut(s) | 136 |
| HspAI | GCGC | 1 cut(s) | 31 |
| Kzo9I | GATC | 1 cut(s) | 112 |
| LmnI | GCTCC | 3 cut(s) | 165, 183, 220 |
| LpnPI | CCDG | 4 cut(s) | 81, 101, 176, 195 |
| MaeI | CTAG | 1 cut(s) | 229 |
| MalI | GATC | 1 cut(s) | 114 |
| MboI | GATC | 1 cut(s) | 112 |
| MhlI | GDGCHC | 1 cut(s) | 162 |
| MluCI | AATT | 1 cut(s) | 72 |
| MlyI | GAGTC | 1 cut(s) | 139 |
| MnlI | CCTC | 1 cut(s) | 6 |
| MseI | TTAA | 2 cut(s) | 35, 120 |
| MslI | CAYNNNNRTG | 1 cut(s) | 155 |
| NdeII | GATC | 1 cut(s) | 112 |
| NlaIV | GGNNCC | 1 cut(s) | 216 |
| PfeI | GAWTC | 1 cut(s) | 133 |
| PkrI | GCNGC | 1 cut(s) | 94 |
| PleI | GAGTC | 1 cut(s) | 139 |
| PpsI | GAGTC | 1 cut(s) | 139 |
| PspFI | CCCAGC | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 1 cut(s) | 216 |
| RsaI | GTAC | 1 cut(s) | 107 |
| RsaNI | GTAC | 1 cut(s) | 106 |
| RseI | CAYNNNNRTG | 1 cut(s) | 155 |
| SaqAI | TTAA | 2 cut(s) | 35, 120 |
| SatI | GCNGC | 1 cut(s) | 93 |
| Sau3AI | GATC | 1 cut(s) | 112 |
| SchI | GAGTC | 1 cut(s) | 139 |
| SduI | GDGCHC | 1 cut(s) | 162 |
| SetI | ASST | 3 cut(s) | 42, 120, 180 |
| SfcI | CTRYAG | 1 cut(s) | 173 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 155 |
| Sse9I | AATT | 1 cut(s) | 72 |
| SsiI | CCGC | 1 cut(s) | 92 |
| SspMI | CTAG | 1 cut(s) | 229 |
| TasI | AATT | 1 cut(s) | 72 |
| TatI | WGTACW | 1 cut(s) | 105 |
| TauI | GCSGC | 1 cut(s) | 95 |
| TfiI | GAWTC | 1 cut(s) | 133 |
| Tru1I | TTAA | 2 cut(s) | 35, 120 |
| Tru9I | TTAA | 2 cut(s) | 35, 120 |
| XapI | RAATTY | 1 cut(s) | 72 |
| XspI | CTAG | 1 cut(s) | 229 |