RchiOBHm_Chr2g0087871

Clathrin assembly protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0013578
Physical Location & Seq
Forward (+)
2605987 .. 2608376
2390 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46326

Sequence Viewer

Length: 1845 bp
ATGTCAACGAGCACCATTCGCAAGGCGATCGGTGCCGTGAAGGATCAGACCAGCATTAGCCTGGCGAAGGTGGCCGGCACGATCGCGCCGGACTTGGAAGTTCTGGTGGTGAAGGCCACCACCCACGACGAGGACCCGGCCGACGAGAAGTACATCCGGGAGATCGTCGGCCTGACGTCACACTCGCGCGGGTACGTGACGGCGGCGGTGGCGACGATTTCGAAGCGGCTGAGCAAAACCCGCGACTGGATTGTGGCGCTGAAGGCTCTGATGCTGGTGCACAGGCTGCTGATCGACGGCCACGCGCTGTTCGAGGAGGAGATTGTGCGCGCGGCGAGGAGGGGGGTGAGGGTTTTGAACATGGCCGAGTTTCGGGACGAGGCGCATTCGAATTCGTGGGATCACGCTGGGTTTGTGAGGTGTTATGGTATGTATTTGGATGAGAAGGTGGAGTTTGAGGTGGCGGAGAGGAAGTTGAGGGGTGTGGATAATAGGTTTGAGGAGAAGGAGAGTGAGTTTGAGTATGGAATGAGGCGTGCGAGGTCGAGTGAGTCGTTGGAGAGAAAAGAGGGCAAGAATAGTACTCCGGTTAGGGAAATGAGGCCGGAGAGAGTGTTGGGAAGGTTGAATGATTTGTTGAGGGTTCTCGACAGAGTTTTGGGTTGTAGGCCGGCGGGTATGGCCAAGACTAGTAGGTTGGTGATTGTTGCGCTTTATGGGGTTGTGAAGGAGAGTTTTAGGCTGTATGTGGAGATATGTGAGGCGTTGGGGGTTTTGTTGGATAGGTTTGGGGAGATGGAGTACGGGGACTGTGTGAAGGCGTTTGATGTTTATGTTAATGCGGCCAAGATGATTGATGAGCTGTTGTTGTTTTATAATTGGTGCAAGGATATGGGGATTGCGAGGACGTCTGAGTACCCGGAGGTGCTGAGAATAACTGATAAGCTTTTGGGGACACTTGAGGGTTACTTGAAGGAGAAGACAAATAGGCCAAAGAGTACACCTGAGAGGGAGGAGAGGGTTTATGTTGATGAGGAGGTGAAACAGAATGTGAATGAGATCAAGGCTCTTCCTGCACCGGAGAGTTTCACTCCTACTCCTCCTCCGCCAGCACCTGTTGCGCAGCCTAAGCCGGCTTCACAGCCTCAGAGGGTGACTGATGAGTTGGTGAATTTGAGGGATGATGGAGTTACAGTTGATGAGCAAGGAAACAAGTTGGCTTTGGCATTGTTCTCTGGACCTCCTACTACTACTACTACTAATCCAAATGGGTCCTGGGAAGCGTTTGATTCAAATGGCGAGCCTGAAGTGACCTCAGCGTGGCAGACGCCGGCTGCTGACAGCGGTAAAGCAGATTGGGAATTGGCATTGGTTGAAACAGCTAGTAATCTGTCGAAGCAGAAGGCTGATTTGGCTGGTGGTTTTGATCCACTGCTATTGAATGGAATGTATGATCAAGGGACGGTGAGGCAGCATGTGAGCACCTCACAATTGAGTGGTGGGAGTGCAAGTAGTGTGGCAATGCCCTTGCCACCAGGCAAGGGTTCTACGCCGGTGTTGGCCCTGCCTGCACCGGATGGGACAGTGCAAGCTGTGGGACAGCAAGACCCATTCGCTGCCTCCCTTACTGTACCACCTCCTTCATATGTTCAAATAGCCGACATGGAGAGGAAGCAACACTTGCTTACGCAGGAACAGCTTCTTTGGCAGCAATATGGAAAAGATGGGATGCAAGGGCAAGTGAGTTTGGCCAAGCTTTCCGGCGGGTCTGGTTACTATGGTCCTCAACCAATGATGCCTTATGGGATGCCGCAGCCAGGAGGTTACTACTATGCGCCCTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

614

Amino Acids

67.72

Weight (kDa)

5.44

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 325 3.7e-69 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 876
AatII GACGTC 2 cut(s) 179, 911
Acc16I TGCGCA 1 cut(s) 1122
AccB1I GGYRCC 1 cut(s) 32
AccII CGCG 7 cut(s) 86, 187, 189, 243, 305, 330, 332
AclWI GGATC 3 cut(s) 51, 408, 1421
AcoI YGGCCR 7 cut(s) 72, 138, 298, 363, 681, 843, 1749
AcsI RAATTY 2 cut(s) 391, 1171
AcuI CTGAAG 2 cut(s) 281, 1326
AcyI GRCGYC 3 cut(s) 176, 908, 1328
AfaI GTAC 7 cut(s) 152, 194, 583, 803, 917, 1000, 1632
AfiI CCNNNNNNNGG 7 cut(s) 67, 130, 246, 372, 1320, 1541, 1817
AgsI TTSAA 7 cut(s) 358, 628, 973, 1293, 1376, 1441, 1652
AhlI ACTAGT 1 cut(s) 689
AjnI CCWGG 4 cut(s) 60, 1274, 1534, 1816
AjuI GAANNNNNNNTTGG 2 cut(s) 1394, 1426
AluBI AGCT 6 cut(s) 862, 946, 1382, 1592, 1699, 1756
AluI AGCT 6 cut(s) 862, 946, 1382, 1592, 1699, 1756
Alw21I GWGCWC 3 cut(s) 14, 282, 1484
Alw44I GTGCAC 1 cut(s) 278
AlwI GGATC 3 cut(s) 51, 408, 1421
AlwNI CAGNNNCTG 1 cut(s) 1115
ApaLI GTGCAC 1 cut(s) 278
ApeKI GCWGC 7 cut(s) 286, 1123, 1334, 1471, 1616, 1708, 1813
ApoI RAATTY 2 cut(s) 391, 1171
Asp700I GAANNNNTTC 1 cut(s) 1698
AspS9I GGNCC 5 cut(s) 133, 1238, 1272, 1561, 1781
AsuC2I CCSGG 3 cut(s) 137, 158, 920
AsuHPI GGTGA 7 cut(s) 121, 358, 712, 1051, 1165, 1180, 1477
AsuII TTCGAA 2 cut(s) 221, 389
AvaII GGWCC 4 cut(s) 133, 1238, 1272, 1781
BaeGI GKGCMC 1 cut(s) 282
BalI TGGCCA 2 cut(s) 683, 1751
BanI GGYRCC 1 cut(s) 32
BbsI GAAGAC 1 cut(s) 986
Bbv12I GWGCWC 3 cut(s) 14, 282, 1484
BbvCI CCTCAGC 1 cut(s) 1315
BbvI GCAGC 7 cut(s) 273, 1135, 1321, 1483, 1603, 1720, 1825
BccI CCATC 4 cut(s) 790, 1178, 1571, 1718
BceAI ACGGC 3 cut(s) 20, 216, 313
BcgI CGANNNNNNTGC 2 cut(s) 10, 44
BciT130I CCWGG 4 cut(s) 62, 1276, 1536, 1818
BclI TGATCA 1 cut(s) 1453
BcnI CCSGG 3 cut(s) 137, 158, 920
BcuI ACTAGT 1 cut(s) 689
BfaI CTAG 2 cut(s) 690, 1383
BfoI RGCGCY 1 cut(s) 260
BlpI GCTNAGC 1 cut(s) 230
BmcAI AGTACT 1 cut(s) 583
Bme1390I CCNGG 7 cut(s) 62, 137, 158, 920, 1276, 1536, 1818
Bme18I GGWCC 4 cut(s) 133, 1238, 1272, 1781
BmgT120I GGNCC 5 cut(s) 133, 1238, 1272, 1561, 1781
BmiI GGNNCC 3 cut(s) 34, 135, 1273
BmrFI CCNGG 7 cut(s) 62, 137, 158, 920, 1276, 1536, 1818
BmsI GCATC 4 cut(s) 261, 1719, 1785, 1797
BpiI GAAGAC 1 cut(s) 986
BplI GAGNNNNNCTC 2 cut(s) 1075, 1107
Bpu10I CCTNAGC 2 cut(s) 1128, 1315
Bpu1102I GCTNAGC 1 cut(s) 230
Bpu14I TTCGAA 2 cut(s) 221, 389
BpuEI CTTGAG 1 cut(s) 980
BpuMI CCSGG 3 cut(s) 137, 158, 920
BsaAI YACGTR 1 cut(s) 196
BsaHI GRCGYC 3 cut(s) 176, 908, 1328
BsaJI CCNNGG 1 cut(s) 1275
BsaWI WCCGGW 3 cut(s) 586, 1078, 1573
Bsc4I CCNNNNNNNGG 7 cut(s) 67, 130, 246, 372, 1320, 1541, 1817
Bse118I RCCGGY 5 cut(s) 74, 670, 1132, 1330, 1552
Bse1I ACTGG 1 cut(s) 251
Bse3DI GCAATG 1 cut(s) 1527
BseBI CCWGG 4 cut(s) 62, 1276, 1536, 1818
BseDI CCNNGG 1 cut(s) 1275
BseGI GGATG 6 cut(s) 153, 445, 1186, 1582, 1734, 1812
BseLI CCNNNNNNNGG 7 cut(s) 67, 130, 246, 372, 1320, 1541, 1817
BseMI GCAATG 1 cut(s) 1527
BseMII CTCAG 6 cut(s) 221, 903, 920, 996, 1160, 1329
BseNI ACTGG 1 cut(s) 251
BsePI GCGCGC 1 cut(s) 328
BseRI GAGGAG 8 cut(s) 329, 332, 352, 515, 1028, 1049, 1089, 1092
BseSI GKGCMC 1 cut(s) 282
BseX3I CGGCCG 1 cut(s) 138
BseXI GCAGC 7 cut(s) 273, 1135, 1321, 1483, 1603, 1720, 1825
BseYI CCCAGC 1 cut(s) 407
BsgI GTGCAG 2 cut(s) 1059, 1554
Bsh1236I CGCG 7 cut(s) 86, 187, 189, 243, 305, 330, 332
Bsh1285I CGRYCG 3 cut(s) 30, 84, 141
BshNI GGYRCC 1 cut(s) 32
BsiEI CGRYCG 3 cut(s) 30, 84, 141
BsiHKAI GWGCWC 3 cut(s) 14, 282, 1484
BslFI GGGAC 6 cut(s) 389, 821, 967, 1474, 1594, 1611
BslI CCNNNNNNNGG 7 cut(s) 67, 130, 246, 372, 1320, 1541, 1817
BsmFI GGGAC 6 cut(s) 389, 821, 967, 1474, 1594, 1611
BsmI GAATGC 1 cut(s) 385
Bsp119I TTCGAA 2 cut(s) 221, 389
Bsp1286I GDGCHC 3 cut(s) 14, 282, 1484
Bsp143I GATC 9 cut(s) 27, 43, 81, 162, 291, 400, 1059, 1426, 1453
Bsp1720I GCTNAGC 1 cut(s) 230
BspCNI CTCAG 6 cut(s) 222, 904, 921, 997, 1159, 1328
BspFNI CGCG 7 cut(s) 86, 187, 189, 243, 305, 330, 332
BspLI GGNNCC 3 cut(s) 34, 135, 1273
BspPI GGATC 3 cut(s) 51, 408, 1421
BspQI GCTCTTC 1 cut(s) 1074
BspT104I TTCGAA 2 cut(s) 221, 389
BspT107I GGYRCC 1 cut(s) 32
BsrDI GCAATG 1 cut(s) 1527
BsrFI RCCGGY 5 cut(s) 74, 670, 1132, 1330, 1552
BsrI ACTGG 1 cut(s) 251
BssAI RCCGGY 5 cut(s) 74, 670, 1132, 1330, 1552
BssECI CCNNGG 1 cut(s) 1275
BssHII GCGCGC 1 cut(s) 328
BssMI GATC 9 cut(s) 27, 43, 81, 162, 291, 400, 1059, 1426, 1453
BssNI GRCGYC 3 cut(s) 176, 908, 1328
Bst2UI CCWGG 4 cut(s) 62, 1276, 1536, 1818
Bst4CI ACNGT 5 cut(s) 812, 1195, 1465, 1585, 1630
Bst6I CTCTTC 1 cut(s) 1074
BstACI GRCGYC 3 cut(s) 176, 908, 1328
BstAPI GCANNNNNTGC 3 cut(s) 286, 1118, 1681
BstBAI YACGTR 1 cut(s) 196
BstBI TTCGAA 2 cut(s) 221, 389
BstDEI CTNAG 7 cut(s) 230, 912, 929, 1005, 1128, 1146, 1315
BstENI CCTNNNNNAGG 1 cut(s) 65
BstF5I GGATG 6 cut(s) 153, 445, 1186, 1582, 1734, 1812
BstFNI CGCG 7 cut(s) 86, 187, 189, 243, 305, 330, 332
BstH2I RGCGCY 1 cut(s) 260
BstKTI GATC 9 cut(s) 30, 46, 84, 165, 294, 403, 1062, 1429, 1456
BstMBI GATC 9 cut(s) 27, 43, 81, 162, 291, 400, 1059, 1426, 1453
BstMCI CGRYCG 3 cut(s) 30, 84, 141
BstNI CCWGG 4 cut(s) 62, 1276, 1536, 1818
BstNSI RCATGY 1 cut(s) 1478
BstSCI CCNGG 7 cut(s) 60, 135, 156, 918, 1274, 1534, 1816
BstSLI GKGCMC 1 cut(s) 282
BstUI CGCG 7 cut(s) 86, 187, 189, 243, 305, 330, 332
BstV1I GCAGC 7 cut(s) 273, 1135, 1321, 1483, 1603, 1720, 1825
BstV2I GAAGAC 1 cut(s) 986
BstZI CGGCCG 1 cut(s) 138
BtsCI GGATG 6 cut(s) 153, 445, 1186, 1582, 1734, 1812
BtsI GCAGTG 1 cut(s) 1430
BtsIMutI CAGTG 2 cut(s) 1430, 1590
CaiI CAGNNNCTG 1 cut(s) 1115
Cfr10I RCCGGY 5 cut(s) 74, 670, 1132, 1330, 1552
Cfr13I GGNCC 5 cut(s) 133, 1238, 1272, 1561, 1781
CseI GACGC 1 cut(s) 1336
Csp6I GTAC 7 cut(s) 151, 193, 582, 802, 916, 999, 1631
CspCI CAANNNNNGTGG 4 cut(s) 1419, 1454, 1497, 1532
CviAII CATG 3 cut(s) 361, 1475, 1663
CviQI GTAC 7 cut(s) 151, 193, 582, 802, 916, 999, 1631
DdeI CTNAG 7 cut(s) 230, 912, 929, 1005, 1128, 1146, 1315
DpnI GATC 9 cut(s) 29, 45, 83, 164, 293, 402, 1061, 1428, 1455
DpnII GATC 9 cut(s) 27, 43, 81, 162, 291, 400, 1059, 1426, 1453
EaeI YGGCCR 7 cut(s) 72, 138, 298, 363, 681, 843, 1749
EagI CGGCCG 1 cut(s) 138
Eam1104I CTCTTC 1 cut(s) 1074
EarI CTCTTC 1 cut(s) 1074
EciI GGCGGA 2 cut(s) 479, 1095
EclXI CGGCCG 1 cut(s) 138
Eco47I GGWCC 4 cut(s) 133, 1238, 1272, 1781
Eco52I CGGCCG 1 cut(s) 138
Eco57I CTGAAG 2 cut(s) 281, 1326
EcoNI CCTNNNNNAGG 1 cut(s) 65
EcoO109I RGGNCCY 2 cut(s) 133, 1272
EcoRI GAATTC 1 cut(s) 391
EcoRII CCWGG 4 cut(s) 60, 1274, 1534, 1816
FaeI CATG 3 cut(s) 364, 1478, 1666
FalI AAGNNNNNCTT 2 cut(s) 1664, 1696
FaqI GGGAC 6 cut(s) 389, 821, 967, 1474, 1594, 1611
FatI CATG 3 cut(s) 360, 1474, 1662
FauI CCCGC 4 cut(s) 182, 248, 667, 1757
FauNDI CATATG 1 cut(s) 1645
FbaI TGATCA 1 cut(s) 1453
FokI GGATG 6 cut(s) 140, 452, 1193, 1589, 1741, 1819
FspBI CTAG 2 cut(s) 690, 1383
FspI TGCGCA 1 cut(s) 1122
GsaI CCCAGC 1 cut(s) 411
HaeII RGCGCY 1 cut(s) 260
HgaI GACGC 1 cut(s) 1336
Hin1I GRCGYC 3 cut(s) 176, 908, 1328
Hin1II CATG 3 cut(s) 364, 1478, 1666
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 2 cut(s) 944, 1754
HinfI GANTC 2 cut(s) 551, 1289
HphI GGTGA 7 cut(s) 121, 358, 712, 1051, 1165, 1180, 1477
Hpy166II GTNNAC 3 cut(s) 6, 280, 1001
Hpy188I TCNGA 4 cut(s) 48, 270, 913, 1149
Hpy188III TCNNGA 3 cut(s) 374, 647, 1236
Hpy8I GTNNAC 3 cut(s) 6, 280, 1001
Hpy99I CGWCG 5 cut(s) 131, 146, 170, 217, 299
HpyCH4III ACNGT 5 cut(s) 812, 1195, 1465, 1585, 1630
HpyCH4IV ACGT 3 cut(s) 176, 195, 908
HpyCH4V TGCA 7 cut(s) 280, 885, 1076, 1508, 1571, 1588, 1732
HpyF3I CTNAG 7 cut(s) 230, 912, 929, 1005, 1128, 1146, 1315
HpySE526I ACGT 3 cut(s) 176, 195, 908
Hsp92I GRCGYC 3 cut(s) 176, 908, 1328
Hsp92II CATG 3 cut(s) 364, 1478, 1666
KroI GCCGGC 4 cut(s) 74, 670, 1132, 1330
KroNI GCCGGC 4 cut(s) 76, 672, 1134, 1332
Ksp22I TGATCA 1 cut(s) 1453
Kzo9I GATC 9 cut(s) 27, 43, 81, 162, 291, 400, 1059, 1426, 1453
LguI GCTCTTC 1 cut(s) 1074
Lsp1109I GCAGC 7 cut(s) 273, 1135, 1321, 1483, 1603, 1720, 1825
LweI GCATC 4 cut(s) 261, 1719, 1785, 1797
MaeI CTAG 2 cut(s) 690, 1383
MaeII ACGT 3 cut(s) 176, 195, 908
MaeIII GTNAC 8 cut(s) 177, 196, 965, 1153, 1189, 1309, 1772, 1823
MalI GATC 9 cut(s) 29, 45, 83, 164, 293, 402, 1061, 1428, 1455
MboI GATC 9 cut(s) 27, 43, 81, 162, 291, 400, 1059, 1426, 1453
MboII GAAGA 2 cut(s) 991, 1061
MfeI CAATTG 1 cut(s) 1490
MhlI GDGCHC 3 cut(s) 14, 282, 1484
MlsI TGGCCA 2 cut(s) 683, 1751
MluCI AATT 5 cut(s) 391, 877, 1171, 1361, 1490
MluNI TGGCCA 2 cut(s) 683, 1751
MlyI GAGTC 1 cut(s) 560
MmeI TCCRAC 2 cut(s) 537, 759
Mox20I TGGCCA 2 cut(s) 683, 1751
MroNI GCCGGC 4 cut(s) 74, 670, 1132, 1330
MroXI GAANNNNTTC 1 cut(s) 1698
MscI TGGCCA 2 cut(s) 683, 1751
MseI TTAA 2 cut(s) 837, 1843
Msp20I TGGCCA 2 cut(s) 683, 1751
MspA1I CMGCKG 1 cut(s) 1344
MspR9I CCNGG 7 cut(s) 62, 137, 158, 920, 1276, 1536, 1818
MunI CAATTG 1 cut(s) 1490
Mva1269I GAATGC 1 cut(s) 385
MvaI CCWGG 4 cut(s) 62, 1276, 1536, 1818
MvnI CGCG 7 cut(s) 86, 187, 189, 243, 305, 330, 332
NaeI GCCGGC 4 cut(s) 76, 672, 1134, 1332
NciI CCSGG 3 cut(s) 137, 158, 920
NdeI CATATG 1 cut(s) 1645
NdeII GATC 9 cut(s) 27, 43, 81, 162, 291, 400, 1059, 1426, 1453
NgoMIV GCCGGC 4 cut(s) 74, 670, 1132, 1330
NlaIII CATG 3 cut(s) 364, 1478, 1666
NlaIV GGNNCC 3 cut(s) 34, 135, 1273
NmeAIII GCCGAG 1 cut(s) 391
NmuCI GTSAC 4 cut(s) 177, 196, 1153, 1309
NsbI TGCGCA 1 cut(s) 1122
NspI RCATGY 1 cut(s) 1478
NspV TTCGAA 2 cut(s) 221, 389
PauI GCGCGC 1 cut(s) 328
PciSI GCTCTTC 1 cut(s) 1074
PcsI WCGNNNNNNNCGW 2 cut(s) 309, 551
PctI GAATGC 1 cut(s) 385
PdiI GCCGGC 4 cut(s) 76, 672, 1134, 1332
PdmI GAANNNNTTC 1 cut(s) 1698
PfeI GAWTC 1 cut(s) 1289
PfoI TCCNGGA 1 cut(s) 156
Ple19I CGATCG 2 cut(s) 30, 84
PleI GAGTC 1 cut(s) 559
PpsI GAGTC 1 cut(s) 559
Ppu21I YACGTR 1 cut(s) 196
PpuMI RGGWCCY 2 cut(s) 133, 1272
PsiI TTATAA 1 cut(s) 876
Psp5II RGGWCCY 2 cut(s) 133, 1272
Psp6I CCWGG 4 cut(s) 60, 1274, 1534, 1816
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 4 cut(s) 60, 1274, 1534, 1816
PspN4I GGNNCC 3 cut(s) 34, 135, 1273
PspPI GGNCC 5 cut(s) 133, 1238, 1272, 1561, 1781
PspPPI RGGWCCY 2 cut(s) 133, 1272
PstNI CAGNNNCTG 1 cut(s) 1115
PteI GCGCGC 1 cut(s) 328
PvuI CGATCG 2 cut(s) 30, 84
RsaI GTAC 7 cut(s) 152, 194, 583, 803, 917, 1000, 1632
RsaNI GTAC 7 cut(s) 151, 193, 582, 802, 916, 999, 1631
SapI GCTCTTC 1 cut(s) 1074
SaqAI TTAA 2 cut(s) 837, 1843
Sau3AI GATC 9 cut(s) 27, 43, 81, 162, 291, 400, 1059, 1426, 1453
Sau96I GGNCC 5 cut(s) 133, 1238, 1272, 1561, 1781
ScaI AGTACT 1 cut(s) 583
SchI GAGTC 1 cut(s) 560
ScrFI CCNGG 7 cut(s) 62, 137, 158, 920, 1276, 1536, 1818
SduI GDGCHC 3 cut(s) 14, 282, 1484
SfaNI GCATC 4 cut(s) 261, 1719, 1785, 1797
SfuI TTCGAA 2 cut(s) 221, 389
SgrAI CRCCGGYG 1 cut(s) 1552
SinI GGWCC 4 cut(s) 133, 1238, 1272, 1781
SmlI CTYRAG 1 cut(s) 959
SmoI CTYRAG 1 cut(s) 959
SpeI ACTAGT 1 cut(s) 689
Sse9I AATT 5 cut(s) 391, 877, 1171, 1361, 1490
SspMI CTAG 2 cut(s) 690, 1383
StyD4I CCNGG 7 cut(s) 60, 135, 156, 918, 1274, 1534, 1816
TaaI ACNGT 5 cut(s) 812, 1195, 1465, 1585, 1630
TaiI ACGT 3 cut(s) 179, 198, 911
TaqI TCGA 7 cut(s) 221, 294, 312, 389, 545, 648, 1394
TasI AATT 5 cut(s) 391, 877, 1171, 1361, 1490
TatI WGTACW 3 cut(s) 150, 581, 998
TauI GCSGC 5 cut(s) 206, 229, 335, 845, 1813
TfiI GAWTC 1 cut(s) 1289
Tru1I TTAA 2 cut(s) 837, 1843
Tru9I TTAA 2 cut(s) 837, 1843
TscAI CASTG 2 cut(s) 1437, 1590
TseFI GTSAC 4 cut(s) 177, 196, 1153, 1309
TseI GCWGC 7 cut(s) 286, 1123, 1334, 1471, 1616, 1708, 1813
Tsp45I GTSAC 4 cut(s) 177, 196, 1153, 1309
TspDTI ATGAA 1 cut(s) 1632
TspRI CASTG 2 cut(s) 1437, 1590
VneI GTGCAC 1 cut(s) 278
VpaK11BI GGWCC 4 cut(s) 133, 1238, 1272, 1781
XagI CCTNNNNNAGG 1 cut(s) 65
XapI RAATTY 2 cut(s) 391, 1171
XceI RCATGY 1 cut(s) 1478
XcmI CCANNNNNNNNNTGG 2 cut(s) 58, 1272
XmnI GAANNNNTTC 1 cut(s) 1698
XspI CTAG 2 cut(s) 690, 1383
ZraI GACGTC 2 cut(s) 177, 909
ZrmI AGTACT 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.