Rroxscaffold_2G00153150

Clathrin assembly protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0013578
Physical Location & Seq
Reverse (-)
89928947 .. 89931401
2455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00153150.1

Sequence Viewer

Length: 1845 bp
ATGTCAACGAGCACCATTCGCAAGGCGATCGGTGCCGTGAAGGATCAGACCAGCATTAGCCTGGCGAAGGTGGCCGGCACGATCGCGCCGGACTTGGAAGTTCTGGTGGTGAAGGCCACCACCCACGACGAGGACCCGGCCGAGGAGAAGTACATCCGGGAGATCGTCGGCCTGACGTCACACTCGCGTGGGTACGTGACGGCGGCGGTGGCGACGATTTCGAAGCGGCTGAGCAAAACCCACGACTGGATTGTGGCGCTGAAGGCTCTGATGCTGGTGCACAGGCTGTTGATCGACGGCCACGCGCTGTTCGAGGAGGAGATTGTGTACGCGGCGAGGAGGGGGATGAGGGTTTTGAACATGGCGGGGTTTCGGGACGAGGCGCATTCGAATTCGTGGGATCATGCTGGGTTTGTGAGGTGTTATGGTATGTATTTGGATGAGAAGGTGGAGTTTGAGGTGGCGGAGAGGAAGTCGAGGGGTGTGGATAATAGATTTGAGGAGAAGGAGAGTGAGTTTGAGTATGGAATGAGGCGTGCGAGGTCGAGTGAGTCATTGGAGAGAAGAGAGGGCAAGAATGGTACTCCCGTTAGGGAAATGAGGCCGGAGAGAGTGTTGGGAAGGCTGAATGATTTGTTGAGGATTCTCGACAGAGTTTTGGGTTGTAGGCCGGCGGGTATGGCCAAGACTAGTAGGTTGGTGATTGTTGCGCTTTATGGGGTTGTGAAGGAGAGTTTTAGGCTGTATGTGGAGATATGTGAGGCGTTGGGGGTTTTGTTGGATAGGTTTGGGGAGATGGAGTATGGGGATTGTGTGAAGGCGTTTGATGTTTATGTTAATGCGGCCAAGGTGATTGATGAGCTGTTGTTGTTTTATAATTGGTGCAAGGATATGGGGATTGCGAGGACCTCTGAGTACCCGGAGGTGCTGAGAATAACTGATAAGCTTTTGGGGACACTTGAGGGTTACTTGAAGGAGAAGACAAATAGGCCAAAGAGTACTCCTGAGAGGGAGGAGAGGGTTTATGTTGATGAGGAGGTGAAACAGAATGTGAATATGAATGAGATCAAGGCTCTTCCTGCACCGGAGAGTTTCACTCCTACTCCTCCTCCGCCGGCACCTGTTGCGCAGCCTAAGCCGGCTTCACAGCCTCAGAGGGTCACTGATGAGTTGGTGAATTTGAGGGATGATGGAGTTACAGTTGATGAGCAAGGAAACAAGTTGGCTTTGGCATTGTTCTCTGGACCTCCTACTACTACTAATCCAAATGGGTCCTGGGAAGCGTTTGATTCAAATGGAGAGCCTGAAGTGACCTCAGCGTGGCAGACGCCGGCTGCTGACAGCGGTAAAGCAGATTGGGAGTTGGCATTGGTTGAAACAGCTAGTAATCTGTCAAAGCAGAAGGCTGATTTGGCTGGTGGTTTTGATCCACTGCTATTGAATGGAATGTATGATCAAGGGACGGTGAGGCAGCATGTGAGCACCTCACAATTGAGTGGTGGGAGTGCAAGTAGTGTGGCAATGCCCTTGCCACCAGGCAAGGGTTCTACGCCGGTGTTGGCCCTGCCTGCACCGGATGGGACAGTGCAAGCTGTGGGACAGCAAGATCCTTTCGCTGCCTCCCTTACCGTACCACCTCCTTCATATGTTCAAATAGCCGACATGGAGAGGAAGCAACACTTGCTTACGCAGGAACAGCTTCTTTGGCAGCAATATGGAAAAGATGGGATGCAAGGGCAAGTGAGTTTGGCCAAGCTTTCTGGCGGGTCTGGTTACTATGGTCCTCAACCAATGATGCCTTATGGGATGCCGCAGCCAGGAGGTTACTACTATGCGCCCTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

614

Amino Acids

67.68

Weight (kDa)

5.43

Isoelectric Point (pI)

38.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 325 9.3e-68 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 876
AatII GACGTC 1 cut(s) 179
Acc16I TGCGCA 1 cut(s) 1128
AccB1I GGYRCC 2 cut(s) 32, 1117
AccII CGCG 4 cut(s) 86, 187, 305, 332
AclWI GGATC 4 cut(s) 51, 408, 1421, 1601
AcoI YGGCCR 6 cut(s) 72, 138, 298, 681, 843, 1749
AcsI RAATTY 2 cut(s) 391, 1177
AcuI CTGAAG 2 cut(s) 281, 1326
AcyI GRCGYC 2 cut(s) 176, 1328
AfaI GTAC 7 cut(s) 152, 194, 329, 583, 917, 1000, 1632
AfiI CCNNNNNNNGG 7 cut(s) 67, 130, 142, 246, 1320, 1541, 1817
AgsI TTSAA 6 cut(s) 358, 973, 1293, 1376, 1441, 1652
AhlI ACTAGT 1 cut(s) 689
AjnI CCWGG 4 cut(s) 60, 1274, 1534, 1816
AjuI GAANNNNNNNTTGG 2 cut(s) 1394, 1426
AleI CACNNNNGTG 1 cut(s) 186
AluBI AGCT 6 cut(s) 862, 946, 1382, 1592, 1699, 1756
AluI AGCT 6 cut(s) 862, 946, 1382, 1592, 1699, 1756
Alw21I GWGCWC 3 cut(s) 14, 282, 1484
Alw44I GTGCAC 1 cut(s) 278
AlwI GGATC 4 cut(s) 51, 408, 1421, 1601
ApaLI GTGCAC 1 cut(s) 278
ApeKI GCWGC 6 cut(s) 1129, 1334, 1471, 1616, 1708, 1813
ApoI RAATTY 2 cut(s) 391, 1177
Asp700I GAANNNNTTC 1 cut(s) 1698
AspLEI GCGC 7 cut(s) 88, 259, 307, 385, 712, 1129, 1837
AspS9I GGNCC 6 cut(s) 133, 906, 1244, 1272, 1561, 1781
AsuC2I CCSGG 3 cut(s) 137, 158, 920
AsuHPI GGTGA 6 cut(s) 121, 712, 862, 1051, 1186, 1477
AsuII TTCGAA 2 cut(s) 221, 389
AvaII GGWCC 5 cut(s) 133, 906, 1244, 1272, 1781
BaeGI GKGCMC 1 cut(s) 282
BaeI ACNNNNGTAYC 2 cut(s) 573, 606
BalI TGGCCA 2 cut(s) 683, 1751
BanI GGYRCC 2 cut(s) 32, 1117
BbsI GAAGAC 1 cut(s) 986
Bbv12I GWGCWC 3 cut(s) 14, 282, 1484
BbvCI CCTCAGC 1 cut(s) 1315
BbvI GCAGC 6 cut(s) 1141, 1321, 1483, 1603, 1720, 1825
BccI CCATC 4 cut(s) 790, 1184, 1571, 1718
BceAI ACGGC 3 cut(s) 20, 216, 313
BcgI CGANNNNNNTGC 2 cut(s) 10, 44
BciT130I CCWGG 4 cut(s) 62, 1276, 1536, 1818
BclI TGATCA 1 cut(s) 1453
BcnI CCSGG 3 cut(s) 137, 158, 920
BcuI ACTAGT 1 cut(s) 689
BfaI CTAG 2 cut(s) 690, 1383
BfoI RGCGCY 1 cut(s) 260
BlpI GCTNAGC 1 cut(s) 230
BmcAI AGTACT 1 cut(s) 1000
Bme1390I CCNGG 7 cut(s) 62, 137, 158, 920, 1276, 1536, 1818
Bme18I GGWCC 5 cut(s) 133, 906, 1244, 1272, 1781
BmgT120I GGNCC 6 cut(s) 133, 906, 1244, 1272, 1561, 1781
BmiI GGNNCC 4 cut(s) 34, 135, 1119, 1273
BmrFI CCNGG 7 cut(s) 62, 137, 158, 920, 1276, 1536, 1818
BmsI GCATC 4 cut(s) 261, 1719, 1785, 1797
BpiI GAAGAC 1 cut(s) 986
BplI GAGNNNNNCTC 2 cut(s) 1081, 1113
Bpu10I CCTNAGC 2 cut(s) 1134, 1315
Bpu1102I GCTNAGC 1 cut(s) 230
Bpu14I TTCGAA 2 cut(s) 221, 389
BpuEI CTTGAG 1 cut(s) 980
BpuMI CCSGG 3 cut(s) 137, 158, 920
BsaAI YACGTR 1 cut(s) 196
BsaHI GRCGYC 2 cut(s) 176, 1328
BsaJI CCNNGG 3 cut(s) 141, 846, 1275
BsaWI WCCGGW 2 cut(s) 1084, 1573
Bsc4I CCNNNNNNNGG 7 cut(s) 67, 130, 142, 246, 1320, 1541, 1817
Bse118I RCCGGY 6 cut(s) 74, 670, 1114, 1138, 1330, 1552
Bse1I ACTGG 1 cut(s) 251
Bse3DI GCAATG 1 cut(s) 1527
BseBI CCWGG 4 cut(s) 62, 1276, 1536, 1818
BseDI CCNNGG 3 cut(s) 141, 846, 1275
BseGI GGATG 7 cut(s) 153, 351, 445, 1192, 1582, 1734, 1812
BseLI CCNNNNNNNGG 7 cut(s) 67, 130, 142, 246, 1320, 1541, 1817
BseMI GCAATG 1 cut(s) 1527
BseMII CTCAG 6 cut(s) 221, 903, 920, 996, 1166, 1329
BseNI ACTGG 1 cut(s) 251
BseRI GAGGAG 9 cut(s) 158, 329, 332, 352, 515, 1028, 1049, 1095, 1098
BseSI GKGCMC 1 cut(s) 282
BseX3I CGGCCG 1 cut(s) 138
BseXI GCAGC 6 cut(s) 1141, 1321, 1483, 1603, 1720, 1825
BseYI CCCAGC 1 cut(s) 407
BsgI GTGCAG 2 cut(s) 1065, 1554
Bsh1236I CGCG 4 cut(s) 86, 187, 305, 332
Bsh1285I CGRYCG 3 cut(s) 30, 84, 141
BshNI GGYRCC 2 cut(s) 32, 1117
BsiEI CGRYCG 3 cut(s) 30, 84, 141
BsiHKAI GWGCWC 3 cut(s) 14, 282, 1484
BslFI GGGAC 5 cut(s) 389, 967, 1474, 1594, 1611
BslI CCNNNNNNNGG 7 cut(s) 67, 130, 142, 246, 1320, 1541, 1817
BsmFI GGGAC 5 cut(s) 389, 967, 1474, 1594, 1611
BsmI GAATGC 1 cut(s) 385
Bsp119I TTCGAA 2 cut(s) 221, 389
Bsp1286I GDGCHC 3 cut(s) 14, 282, 1484
Bsp1720I GCTNAGC 1 cut(s) 230
BspCNI CTCAG 6 cut(s) 222, 904, 921, 997, 1165, 1328
BspFNI CGCG 4 cut(s) 86, 187, 305, 332
BspLI GGNNCC 4 cut(s) 34, 135, 1119, 1273
BspPI GGATC 4 cut(s) 51, 408, 1421, 1601
BspQI GCTCTTC 1 cut(s) 1080
BspT104I TTCGAA 2 cut(s) 221, 389
BspT107I GGYRCC 2 cut(s) 32, 1117
BsrDI GCAATG 1 cut(s) 1527
BsrFI RCCGGY 6 cut(s) 74, 670, 1114, 1138, 1330, 1552
BsrI ACTGG 1 cut(s) 251
BssAI RCCGGY 6 cut(s) 74, 670, 1114, 1138, 1330, 1552
BssECI CCNNGG 3 cut(s) 141, 846, 1275
BssNI GRCGYC 2 cut(s) 176, 1328
BssT1I CCWWGG 1 cut(s) 846
Bst2UI CCWGG 4 cut(s) 62, 1276, 1536, 1818
Bst4CI ACNGT 4 cut(s) 1201, 1465, 1585, 1630
Bst6I CTCTTC 2 cut(s) 559, 1080
BstACI GRCGYC 2 cut(s) 176, 1328
BstAPI GCANNNNNTGC 2 cut(s) 1124, 1681
BstBAI YACGTR 1 cut(s) 196
BstBI TTCGAA 2 cut(s) 221, 389
BstC8I GCNNGC 8 cut(s) 76, 537, 672, 1116, 1140, 1332, 1569, 1590
BstDEI CTNAG 7 cut(s) 230, 912, 929, 1005, 1134, 1152, 1315
BstENI CCTNNNNNAGG 1 cut(s) 65
BstF5I GGATG 7 cut(s) 153, 351, 445, 1192, 1582, 1734, 1812
BstFNI CGCG 4 cut(s) 86, 187, 305, 332
BstH2I RGCGCY 1 cut(s) 260
BstHHI GCGC 7 cut(s) 88, 259, 307, 385, 712, 1129, 1837
BstMCI CGRYCG 3 cut(s) 30, 84, 141
BstNI CCWGG 4 cut(s) 62, 1276, 1536, 1818
BstNSI RCATGY 1 cut(s) 1478
BstSCI CCNGG 7 cut(s) 60, 135, 156, 918, 1274, 1534, 1816
BstSLI GKGCMC 1 cut(s) 282
BstUI CGCG 4 cut(s) 86, 187, 305, 332
BstV1I GCAGC 6 cut(s) 1141, 1321, 1483, 1603, 1720, 1825
BstV2I GAAGAC 1 cut(s) 986
BstX2I RGATCY 1 cut(s) 1606
BstYI RGATCY 1 cut(s) 1606
BstZI CGGCCG 1 cut(s) 138
BtsCI GGATG 7 cut(s) 153, 351, 445, 1192, 1582, 1734, 1812
BtsI GCAGTG 1 cut(s) 1430
BtsIMutI CAGTG 3 cut(s) 1161, 1430, 1590
Cac8I GCNNGC 8 cut(s) 76, 537, 672, 1116, 1140, 1332, 1569, 1590
CfoI GCGC 7 cut(s) 88, 259, 307, 385, 712, 1129, 1837
Cfr10I RCCGGY 6 cut(s) 74, 670, 1114, 1138, 1330, 1552
Cfr13I GGNCC 6 cut(s) 133, 906, 1244, 1272, 1561, 1781
CseI GACGC 1 cut(s) 1336
Csp6I GTAC 7 cut(s) 151, 193, 328, 582, 916, 999, 1631
CspCI CAANNNNNGTGG 4 cut(s) 1419, 1454, 1497, 1532
CviAII CATG 4 cut(s) 361, 404, 1475, 1663
CviQI GTAC 7 cut(s) 151, 193, 328, 582, 916, 999, 1631
DdeI CTNAG 7 cut(s) 230, 912, 929, 1005, 1134, 1152, 1315
EaeI YGGCCR 6 cut(s) 72, 138, 298, 681, 843, 1749
EagI CGGCCG 1 cut(s) 138
Eam1104I CTCTTC 2 cut(s) 559, 1080
EarI CTCTTC 2 cut(s) 559, 1080
EciI GGCGGA 2 cut(s) 479, 1101
EclXI CGGCCG 1 cut(s) 138
Eco130I CCWWGG 1 cut(s) 846
Eco47I GGWCC 5 cut(s) 133, 906, 1244, 1272, 1781
Eco52I CGGCCG 1 cut(s) 138
Eco57I CTGAAG 2 cut(s) 281, 1326
EcoNI CCTNNNNNAGG 1 cut(s) 65
EcoO109I RGGNCCY 3 cut(s) 133, 906, 1272
EcoRI GAATTC 1 cut(s) 391
EcoRII CCWGG 4 cut(s) 60, 1274, 1534, 1816
EcoT14I CCWWGG 1 cut(s) 846
ErhI CCWWGG 1 cut(s) 846
FaeI CATG 4 cut(s) 364, 407, 1478, 1666
FalI AAGNNNNNCTT 2 cut(s) 1664, 1696
FaqI GGGAC 5 cut(s) 389, 967, 1474, 1594, 1611
FatI CATG 4 cut(s) 360, 403, 1474, 1662
FauI CCCGC 3 cut(s) 358, 667, 1757
FauNDI CATATG 1 cut(s) 1645
FbaI TGATCA 1 cut(s) 1453
FokI GGATG 7 cut(s) 140, 358, 452, 1199, 1589, 1741, 1819
FspBI CTAG 2 cut(s) 690, 1383
FspI TGCGCA 1 cut(s) 1128
GlaI GCGC 7 cut(s) 87, 258, 306, 384, 711, 1128, 1836
GsaI CCCAGC 1 cut(s) 411
HaeII RGCGCY 1 cut(s) 260
HgaI GACGC 1 cut(s) 1336
HhaI GCGC 7 cut(s) 88, 259, 307, 385, 712, 1129, 1837
Hin1I GRCGYC 2 cut(s) 176, 1328
Hin1II CATG 4 cut(s) 364, 407, 1478, 1666
Hin6I GCGC 7 cut(s) 86, 257, 305, 383, 710, 1127, 1835
HinP1I GCGC 7 cut(s) 86, 257, 305, 383, 710, 1127, 1835
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 2 cut(s) 944, 1754
HinfI GANTC 3 cut(s) 551, 643, 1289
HphI GGTGA 6 cut(s) 121, 712, 862, 1051, 1186, 1477
Hpy166II GTNNAC 3 cut(s) 6, 280, 328
Hpy188I TCNGA 4 cut(s) 48, 270, 913, 1155
Hpy188III TCNNGA 4 cut(s) 374, 647, 1004, 1242
Hpy8I GTNNAC 3 cut(s) 6, 280, 328
Hpy99I CGWCG 4 cut(s) 131, 170, 217, 299
HpyCH4III ACNGT 4 cut(s) 1201, 1465, 1585, 1630
HpyCH4IV ACGT 2 cut(s) 176, 195
HpyCH4V TGCA 7 cut(s) 280, 885, 1082, 1508, 1571, 1588, 1732
HpyF3I CTNAG 7 cut(s) 230, 912, 929, 1005, 1134, 1152, 1315
HpySE526I ACGT 2 cut(s) 176, 195
Hsp92I GRCGYC 2 cut(s) 176, 1328
Hsp92II CATG 4 cut(s) 364, 407, 1478, 1666
HspAI GCGC 7 cut(s) 86, 257, 305, 383, 710, 1127, 1835
KroI GCCGGC 5 cut(s) 74, 670, 1114, 1138, 1330
KroNI GCCGGC 5 cut(s) 76, 672, 1116, 1140, 1332
Ksp22I TGATCA 1 cut(s) 1453
LguI GCTCTTC 1 cut(s) 1080
Lsp1109I GCAGC 6 cut(s) 1141, 1321, 1483, 1603, 1720, 1825
LweI GCATC 4 cut(s) 261, 1719, 1785, 1797
MaeI CTAG 2 cut(s) 690, 1383
MaeII ACGT 2 cut(s) 176, 195
MaeIII GTNAC 8 cut(s) 177, 196, 965, 1159, 1195, 1309, 1772, 1823
MboII GAAGA 3 cut(s) 576, 991, 1067
MfeI CAATTG 1 cut(s) 1490
MflI RGATCY 1 cut(s) 1606
MhlI GDGCHC 3 cut(s) 14, 282, 1484
MlsI TGGCCA 2 cut(s) 683, 1751
MluCI AATT 4 cut(s) 391, 877, 1177, 1490
MluNI TGGCCA 2 cut(s) 683, 1751
MlyI GAGTC 1 cut(s) 560
MmeI TCCRAC 1 cut(s) 759
Mox20I TGGCCA 2 cut(s) 683, 1751
MroNI GCCGGC 5 cut(s) 74, 670, 1114, 1138, 1330
MroXI GAANNNNTTC 1 cut(s) 1698
MscI TGGCCA 2 cut(s) 683, 1751
MseI TTAA 2 cut(s) 837, 1843
MslI CAYNNNNRTG 1 cut(s) 186
Msp20I TGGCCA 2 cut(s) 683, 1751
MspA1I CMGCKG 1 cut(s) 1344
MspR9I CCNGG 7 cut(s) 62, 137, 158, 920, 1276, 1536, 1818
MunI CAATTG 1 cut(s) 1490
Mva1269I GAATGC 1 cut(s) 385
MvaI CCWGG 4 cut(s) 62, 1276, 1536, 1818
MvnI CGCG 4 cut(s) 86, 187, 305, 332
NaeI GCCGGC 5 cut(s) 76, 672, 1116, 1140, 1332
NciI CCSGG 3 cut(s) 137, 158, 920
NdeI CATATG 1 cut(s) 1645
NgoMIV GCCGGC 5 cut(s) 74, 670, 1114, 1138, 1330
NlaIII CATG 4 cut(s) 364, 407, 1478, 1666
NlaIV GGNNCC 4 cut(s) 34, 135, 1119, 1273
NmeAIII GCCGAG 1 cut(s) 166
NmuCI GTSAC 4 cut(s) 177, 196, 1159, 1309
NsbI TGCGCA 1 cut(s) 1128
NspI RCATGY 1 cut(s) 1478
NspV TTCGAA 2 cut(s) 221, 389
OliI CACNNNNGTG 1 cut(s) 186
PciSI GCTCTTC 1 cut(s) 1080
PcsI WCGNNNNNNNCGW 1 cut(s) 309
PctI GAATGC 1 cut(s) 385
PdiI GCCGGC 5 cut(s) 76, 672, 1116, 1140, 1332
PdmI GAANNNNTTC 1 cut(s) 1698
PfeI GAWTC 2 cut(s) 643, 1289
PfoI TCCNGGA 1 cut(s) 156
Ple19I CGATCG 2 cut(s) 30, 84
PleI GAGTC 1 cut(s) 559
PpsI GAGTC 1 cut(s) 559
Ppu21I YACGTR 1 cut(s) 196
PpuMI RGGWCCY 3 cut(s) 133, 906, 1272
PsiI TTATAA 1 cut(s) 876
Psp5II RGGWCCY 3 cut(s) 133, 906, 1272
Psp6I CCWGG 4 cut(s) 60, 1274, 1534, 1816
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 4 cut(s) 60, 1274, 1534, 1816
PspN4I GGNNCC 4 cut(s) 34, 135, 1119, 1273
PspPI GGNCC 6 cut(s) 133, 906, 1244, 1272, 1561, 1781
PspPPI RGGWCCY 3 cut(s) 133, 906, 1272
PsuI RGATCY 1 cut(s) 1606
PvuI CGATCG 2 cut(s) 30, 84
RsaI GTAC 7 cut(s) 152, 194, 329, 583, 917, 1000, 1632
RsaNI GTAC 7 cut(s) 151, 193, 328, 582, 916, 999, 1631
RseI CAYNNNNRTG 1 cut(s) 186
SapI GCTCTTC 1 cut(s) 1080
SaqAI TTAA 2 cut(s) 837, 1843
Sau96I GGNCC 6 cut(s) 133, 906, 1244, 1272, 1561, 1781
ScaI AGTACT 1 cut(s) 1000
SchI GAGTC 1 cut(s) 560
ScrFI CCNGG 7 cut(s) 62, 137, 158, 920, 1276, 1536, 1818
SduI GDGCHC 3 cut(s) 14, 282, 1484
SfaNI GCATC 4 cut(s) 261, 1719, 1785, 1797
SfuI TTCGAA 2 cut(s) 221, 389
SgrAI CRCCGGYG 1 cut(s) 1552
SinI GGWCC 5 cut(s) 133, 906, 1244, 1272, 1781
SmiMI CAYNNNNRTG 1 cut(s) 186
SmlI CTYRAG 1 cut(s) 959
SmoI CTYRAG 1 cut(s) 959
SpeI ACTAGT 1 cut(s) 689
Sse9I AATT 4 cut(s) 391, 877, 1177, 1490
SspMI CTAG 2 cut(s) 690, 1383
StyD4I CCNGG 7 cut(s) 60, 135, 156, 918, 1274, 1534, 1816
StyI CCWWGG 1 cut(s) 846
TaaI ACNGT 4 cut(s) 1201, 1465, 1585, 1630
TaiI ACGT 2 cut(s) 179, 198
TaqI TCGA 7 cut(s) 221, 294, 312, 389, 476, 545, 648
TasI AATT 4 cut(s) 391, 877, 1177, 1490
TatI WGTACW 2 cut(s) 150, 998
TauI GCSGC 5 cut(s) 206, 229, 335, 845, 1813
TfiI GAWTC 2 cut(s) 643, 1289
Tru1I TTAA 2 cut(s) 837, 1843
Tru9I TTAA 2 cut(s) 837, 1843
TscAI CASTG 3 cut(s) 1168, 1437, 1590
TseFI GTSAC 4 cut(s) 177, 196, 1159, 1309
TseI GCWGC 6 cut(s) 1129, 1334, 1471, 1616, 1708, 1813
Tsp45I GTSAC 4 cut(s) 177, 196, 1159, 1309
TspDTI ATGAA 2 cut(s) 1073, 1632
TspRI CASTG 3 cut(s) 1168, 1437, 1590
VneI GTGCAC 1 cut(s) 278
VpaK11BI GGWCC 5 cut(s) 133, 906, 1244, 1272, 1781
XagI CCTNNNNNAGG 1 cut(s) 65
XapI RAATTY 2 cut(s) 391, 1177
XceI RCATGY 1 cut(s) 1478
XcmI CCANNNNNNNNNTGG 2 cut(s) 58, 1272
XmnI GAANNNNTTC 1 cut(s) 1698
XspI CTAG 2 cut(s) 690, 1383
ZraI GACGTC 1 cut(s) 177
ZrmI AGTACT 1 cut(s) 1000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.