trafficking protein particle complex
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0339461 RchiOBHm_Chr2g0096161 RchiOBHm_Chr6g0291331 |
| rosa_multiflora | Rmu_sc0005996.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00035040 |
| rosa_rugosa | Rorug04G0002100 |
| rosa_samantha | Rh1AG290300 Rh2BG302500 Rh3DG310700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 34 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 149 |
| AgsI | TTSAA | 1 cut(s) | 149 |
| AlwI | GGATC | 1 cut(s) | 34 |
| ApeKI | GCWGC | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| BbvI | GCAGC | 1 cut(s) | 46 |
| BfaI | CTAG | 2 cut(s) | 65, 75 |
| BisI | GCNGC | 1 cut(s) | 60 |
| BlsI | GCNGC | 1 cut(s) | 61 |
| BpmI | CTGGAG | 1 cut(s) | 105 |
| BsaBI | GATNNNNATC | 1 cut(s) | 42 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 112, 142 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 149 |
| Bse1I | ACTGG | 1 cut(s) | 88 |
| Bse8I | GATNNNNATC | 1 cut(s) | 42 |
| BseJI | GATNNNNATC | 1 cut(s) | 42 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 149 |
| BseNI | ACTGG | 1 cut(s) | 88 |
| BseXI | GCAGC | 1 cut(s) | 46 |
| BsgI | GTGCAG | 1 cut(s) | 45 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 149 |
| Bsp143I | GATC | 1 cut(s) | 26 |
| BspPI | GGATC | 1 cut(s) | 34 |
| BsrI | ACTGG | 1 cut(s) | 88 |
| BssMI | GATC | 1 cut(s) | 26 |
| BstKTI | GATC | 1 cut(s) | 29 |
| BstMBI | GATC | 1 cut(s) | 26 |
| BstNSI | RCATGY | 1 cut(s) | 19 |
| BstV1I | GCAGC | 1 cut(s) | 46 |
| CviAII | CATG | 1 cut(s) | 16 |
| DpnI | GATC | 1 cut(s) | 28 |
| DpnII | GATC | 1 cut(s) | 26 |
| FaeI | CATG | 1 cut(s) | 19 |
| FaiI | YATR | 2 cut(s) | 17, 102 |
| FatI | CATG | 1 cut(s) | 15 |
| Fnu4HI | GCNGC | 1 cut(s) | 60 |
| Fsp4HI | GCNGC | 1 cut(s) | 60 |
| FspBI | CTAG | 2 cut(s) | 65, 75 |
| GluI | GCNGC | 1 cut(s) | 60 |
| GsuI | CTGGAG | 1 cut(s) | 105 |
| Hin1II | CATG | 1 cut(s) | 19 |
| HincII | GTYRAC | 1 cut(s) | 81 |
| HindII | GTYRAC | 1 cut(s) | 81 |
| HinfI | GANTC | 1 cut(s) | 139 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy166II | GTNNAC | 1 cut(s) | 81 |
| Hpy8I | GTNNAC | 1 cut(s) | 81 |
| HpyAV | CCTTC | 1 cut(s) | 143 |
| HpyCH4V | TGCA | 3 cut(s) | 15, 62, 110 |
| Hsp92II | CATG | 1 cut(s) | 19 |
| Kzo9I | GATC | 1 cut(s) | 26 |
| LmnI | GCTCC | 1 cut(s) | 120 |
| LpnPI | CCDG | 5 cut(s) | 9, 17, 69, 82, 90 |
| Lsp1109I | GCAGC | 1 cut(s) | 46 |
| MaeI | CTAG | 2 cut(s) | 65, 75 |
| MalI | GATC | 1 cut(s) | 28 |
| MboI | GATC | 1 cut(s) | 26 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MnlI | CCTC | 1 cut(s) | 109 |
| NdeII | GATC | 1 cut(s) | 26 |
| NlaIII | CATG | 1 cut(s) | 19 |
| NspI | RCATGY | 1 cut(s) | 19 |
| PfeI | GAWTC | 1 cut(s) | 139 |
| PkrI | GCNGC | 1 cut(s) | 61 |
| SatI | GCNGC | 1 cut(s) | 60 |
| Sau3AI | GATC | 1 cut(s) | 26 |
| SetI | ASST | 2 cut(s) | 36, 80 |
| SgeI | CNNG | 8 cut(s) | 28, 36, 44, 77, 87, 96, 109, 117 |
| SspMI | CTAG | 2 cut(s) | 65, 75 |
| TfiI | GAWTC | 1 cut(s) | 139 |
| TseI | GCWGC | 1 cut(s) | 59 |
| TspDTI | ATGAA | 1 cut(s) | 38 |
| XceI | RCATGY | 1 cut(s) | 19 |
| XspI | CTAG | 2 cut(s) | 65, 75 |