trafficking protein particle complex
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0339461 RchiOBHm_Chr2g0096161 RchiOBHm_Chr6g0291331 |
| rosa_multiflora | Rmu_sc0005996.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00035040 |
| rosa_rugosa | Rorug04G0002100 |
| rosa_samantha | Rh1AG290300 Rh2BG302500 Rh3DG310700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 45 |
| AclWI | GGATC | 2 cut(s) | 73, 166 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 155, 312 |
| AgsI | TTSAA | 2 cut(s) | 98, 200 |
| Alw21I | GWGCWC | 1 cut(s) | 113 |
| Alw44I | GTGCAC | 1 cut(s) | 109 |
| AlwI | GGATC | 2 cut(s) | 73, 166 |
| ApaLI | GTGCAC | 1 cut(s) | 109 |
| AspS9I | GGNCC | 2 cut(s) | 252, 303 |
| AvaII | GGWCC | 2 cut(s) | 252, 303 |
| BaeGI | GKGCMC | 1 cut(s) | 113 |
| Bbv12I | GWGCWC | 1 cut(s) | 113 |
| BccI | CCATC | 1 cut(s) | 56 |
| Bme18I | GGWCC | 2 cut(s) | 252, 303 |
| BmgT120I | GGNCC | 2 cut(s) | 252, 303 |
| BmsI | GCATC | 1 cut(s) | 160 |
| BpmI | CTGGAG | 1 cut(s) | 237 |
| BsaBI | GATNNNNATC | 1 cut(s) | 174 |
| BsaJI | CCNNGG | 1 cut(s) | 49 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 155, 312 |
| Bse1I | ACTGG | 2 cut(s) | 220, 273 |
| Bse8I | GATNNNNATC | 1 cut(s) | 174 |
| BseDI | CCNNGG | 1 cut(s) | 49 |
| BseGI | GGATG | 2 cut(s) | 67, 111 |
| BseJI | GATNNNNATC | 1 cut(s) | 174 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 155, 312 |
| BseNI | ACTGG | 2 cut(s) | 220, 273 |
| BseSI | GKGCMC | 1 cut(s) | 113 |
| BsiHKAI | GWGCWC | 1 cut(s) | 113 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 155, 312 |
| Bsp1286I | GDGCHC | 1 cut(s) | 113 |
| Bsp143I | GATC | 2 cut(s) | 65, 158 |
| Bsp19I | CCATGG | 1 cut(s) | 49 |
| BspPI | GGATC | 2 cut(s) | 73, 166 |
| BsrI | ACTGG | 2 cut(s) | 220, 273 |
| BssECI | CCNNGG | 1 cut(s) | 49 |
| BssMI | GATC | 2 cut(s) | 65, 158 |
| BssNAI | GTATAC | 1 cut(s) | 46 |
| BssT1I | CCWWGG | 1 cut(s) | 49 |
| Bst1107I | GTATAC | 1 cut(s) | 46 |
| Bst4CI | ACNGT | 1 cut(s) | 43 |
| BstDSI | CCRYGG | 1 cut(s) | 49 |
| BstF5I | GGATG | 2 cut(s) | 67, 111 |
| BstKTI | GATC | 2 cut(s) | 68, 161 |
| BstMBI | GATC | 2 cut(s) | 65, 158 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 373 |
| BstSLI | GKGCMC | 1 cut(s) | 113 |
| BstZ17I | GTATAC | 1 cut(s) | 46 |
| BtgI | CCRYGG | 1 cut(s) | 49 |
| BtsCI | GGATG | 2 cut(s) | 67, 111 |
| Cfr13I | GGNCC | 2 cut(s) | 252, 303 |
| CviAII | CATG | 4 cut(s) | 33, 50, 292, 382 |
| CviJI | RGCY | 2 cut(s) | 296, 367 |
| CviKI_1 | RGCY | 2 cut(s) | 296, 367 |
| DpnI | GATC | 2 cut(s) | 67, 160 |
| DpnII | GATC | 2 cut(s) | 65, 158 |
| Eco130I | CCWWGG | 1 cut(s) | 49 |
| Eco47I | GGWCC | 2 cut(s) | 252, 303 |
| EcoT14I | CCWWGG | 1 cut(s) | 49 |
| ErhI | CCWWGG | 1 cut(s) | 49 |
| FaeI | CATG | 4 cut(s) | 36, 53, 295, 385 |
| FaiI | YATR | 9 cut(s) | 34, 46, 51, 73, 293, 301, 312, 383, 388 |
| FatI | CATG | 4 cut(s) | 32, 49, 291, 381 |
| FblI | GTMKAC | 1 cut(s) | 45 |
| FokI | GGATG | 2 cut(s) | 74, 118 |
| GsuI | CTGGAG | 1 cut(s) | 237 |
| Hin1II | CATG | 4 cut(s) | 36, 53, 295, 385 |
| Hpy166II | GTNNAC | 3 cut(s) | 46, 111, 336 |
| Hpy188I | TCNGA | 1 cut(s) | 132 |
| Hpy8I | GTNNAC | 3 cut(s) | 46, 111, 336 |
| HpyCH4III | ACNGT | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 4 cut(s) | 111, 137, 242, 263 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 373 |
| Hsp92II | CATG | 4 cut(s) | 36, 53, 295, 385 |
| Kzo9I | GATC | 2 cut(s) | 65, 158 |
| LpnPI | CCDG | 4 cut(s) | 163, 201, 222, 254 |
| LweI | GCATC | 1 cut(s) | 160 |
| MalI | GATC | 2 cut(s) | 67, 160 |
| MboI | GATC | 2 cut(s) | 65, 158 |
| MboII | GAAGA | 2 cut(s) | 170, 332 |
| MhlI | GDGCHC | 1 cut(s) | 113 |
| MluCI | AATT | 2 cut(s) | 6, 209 |
| MnlI | CCTC | 2 cut(s) | 9, 243 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 373 |
| NcoI | CCATGG | 1 cut(s) | 49 |
| NdeII | GATC | 2 cut(s) | 65, 158 |
| NlaIII | CATG | 4 cut(s) | 36, 53, 295, 385 |
| PspPI | GGNCC | 2 cut(s) | 252, 303 |
| Sau3AI | GATC | 2 cut(s) | 65, 158 |
| Sau96I | GGNCC | 2 cut(s) | 252, 303 |
| SduI | GDGCHC | 1 cut(s) | 113 |
| SetI | ASST | 1 cut(s) | 31 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| SinI | GGWCC | 2 cut(s) | 252, 303 |
| Sse9I | AATT | 2 cut(s) | 6, 209 |
| StyI | CCWWGG | 1 cut(s) | 49 |
| TaaI | ACNGT | 1 cut(s) | 43 |
| TasI | AATT | 2 cut(s) | 6, 209 |
| TspDTI | ATGAA | 4 cut(s) | 21, 170, 280, 371 |
| VneI | GTGCAC | 1 cut(s) | 109 |
| VpaK11BI | GGWCC | 2 cut(s) | 252, 303 |
| XmiI | GTMKAC | 1 cut(s) | 45 |