RchiOBHm_Chr2g0112421

Pentatricopeptide repeat-containing protein At4g02750-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0016737
Physical Location & Seq
Forward (+)
24411399 .. 24414260
2862 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48590

Sequence Viewer

Length: 1776 bp
ATGATGTTGATGCTCCTGGGGCTGATGATGCTTCTGAGAACTACCGCCCGTCTGAACATCCTTTCATCCGTTTCAGGTTGTTATTACGAACCCCAACGCTTGGTTCCTTCACTGCTTAAGCTTTTCTCAACCCATCATGTATACACTTGCAACGTCAAGATCGGCTCTCTCTTTCGAGCGGGTCATATTGAAGCTGCTCGCCAACTGTTCGACGAAATGCCCCAAAGAGACTTGGTTACATGGAACGCTCTCGTTACTGGGTACTGGAAAAACGGTTACTTTCAGGAATCAAAGAGTCTGTTCGAATCGATGCCTCTCAGGAATGTGGTGTCCTGGAACTCCATGGTAGCCGGTTGCGTCGAAAATGGGATGGTTGATGAGGCTTTCGGCTACTTTCGAGCCATGCCCGAGAGGAACATTGCGTCTTGGAATGCTATGATATCTGGGTTTTTGAAGTGTGATCGGGTGGAGGAAGCTAGTAGGCTTTTTGTGGAGATGCCGTGTAGGAATGTGATTTCTTTTACGGCGATGATTGATGGATATGCGAAGAAAGGAGAGGTGGAGAAGGCAAGAGCATTGTTTGATGTCATGCAGCATAAAAATGCGGTTTCTTGGACTGTGCTGATTAGTGGGTATGTGGAGAATGGGAGGTTTGATGAAGCTAGGGAATTGTATAAGCAGATGCCGGAGAAAAATGTGGTTGCAGTGACTGCCATGATCACTGGGTGCTGTAGGGAGGGTAAGATGGAAGATGCGAGAGTGTTGTTCGATGGAATGCAGTTCAAGGATGATGTCTGTTGGAATGCAATGATAACAGGCTATGCACAAAATGGTAGGGGAGAGGAAGCATTGAAGTTACATTCACAAAAGCTCAAGATTGGTTTGCATCCAGATAACTGGACCCTTGTTTCTGTTCTTATGGCCTGTTCTACTCTTGCGTCCCTGAAGGATGGAAGACAAGCTCATGTGCTCATTGTTAAACATGGTCTCGAATCCAATGTCTCCATAAGTAATGCTTTGATTACCATGTACTGCAGATGTGGTGCGATTCTTGACTCTGAGTTAGCTTTCAAACAAATTGAGAGTCCGGACCTTGTCTCATGGAACACCATTGTTGCTGCATTTGCACAGCACGGTCTCTACAAGAAGGCTCTGGCTTTTTTCAACCAGATGAGGGTCAGTGGCTTTGAACCGGATGGCATAACATTTCTTAGTGTCTTATCTGCTTGTGCTCGTGTGGGAAAAGTGAATGAGAGCATGGATTTGTTCGACTCAATGGTCAATAAATATGGTATTTCCCCTCGGTCGGAGCATTATGCTTGCTTAATTGATCTATTGAGTCGAGCAGGTCAGTTAGAGAAAGCTTGCAAGATGATCCAAGAGATGCCATTTGAAGCAGACTTTGGGATTTGGGGAGCTCTTCTTGCAGCTTCCAGTGTTCATTCAAATGTCGAAATAGGGGAACTGGCTGCTAAGAATATGTTAGACTTGGATCCCCAGAGTTCTGGGCCTTATGTCATATTGTCCAATATGTATGCAGCTGCTGGTAAATGGAATGATGTTGCTAGAGTGAGGAGTTTGATGAAAAAGCATGGAGTCAAGAAGCAACAGGCATATAGTTGGATAGAGATTGGGAATAAGGTGCAAAATTTCGTTGGAGGGGATATATCGCATCCAGATGTTGATAATATTCATTTGGTGCTCAAGAAGATCAGCCTGCATATGGCTGCAAATAATTTCACAGACATCAGTGTCTCATGGAGCTCTTCTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

591

Amino Acids

65.96

Weight (kDa)

7.2

Isoelectric Point (pI)

38.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 79 - 108 6e-06 PPR repeat
PPR_2 PF13041 107 - 140 4.2e-06 PPR repeat family
PPR PF01535 110 - 140 2.8e-07 PPR repeat
PPR_2 PF13041 139 - 171 4.4e-07 PPR repeat family
PPR PF01535 142 - 170 1.1e-06 PPR repeat
PPR_2 PF13041 169 - 201 8.3e-07 PPR repeat family
PPR_1 PF12854 169 - 197 4.7e-07 PPR repeat
PPR PF01535 172 - 200 5.6e-07 PPR repeat
PPR_2 PF13041 200 - 233 1.4e-07 PPR repeat family
PPR PF01535 203 - 233 7.3e-09 PPR repeat
PPR_2 PF13041 231 - 260 1e-05 PPR repeat family
PPR_2 PF13041 263 - 309 1.2e-07 PPR repeat family
PPR PF01535 265 - 289 1.8e-06 PPR repeat
PPR_2 PF13041 363 - 412 1e-11 PPR repeat family
PPR PF01535 366 - 396 1.5e-06 PPR repeat
E_motif PF20431 481 - 543 1.2e-21 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016737)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20280
malus_domestica MD01G1035200.v1.1 MD15G1320700.v1.1
prunus_persica Prupe.6G192600_v2.0.a1
pyrus_communis pycom01g06230 pycom15g28170
rosa_chinensis RchiOBHm_Chr2g0112421
rosa_laevigata RLG00000017979
rosa_multiflora Rmu_sc0031542.1_g000001
rosa_rugosa Rorug02G0180400
rosa_samantha Rh2BG247100 Rh2CG238200 Rh2DG241400
rosa_wichuraiana Rw2G018100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1277, 1751
Acc36I ACCTGC 1 cut(s) 1337
AccB7I CCANNNNNTGG 1 cut(s) 100
AccBSI CCGCTC 1 cut(s) 179
AccI GTMKAC 1 cut(s) 141
AccIII TCCGGA 1 cut(s) 1087
AciI CCGC 3 cut(s) 45, 179, 605
AclWI GGATC 3 cut(s) 1369, 1487, 1500
AcsI RAATTY 1 cut(s) 1648
AcuI CTGAAG 1 cut(s) 965
AdeI CACNNNGTG 1 cut(s) 726
AfaI GTAC 2 cut(s) 263, 1031
AfiI CCNNNNNNNGG 4 cut(s) 100, 1174, 1306, 1723
AflII CTTAAG 1 cut(s) 116
AgsI TTSAA 9 cut(s) 191, 454, 784, 853, 1072, 1165, 1190, 1394, 1446
AjnI CCWGG 2 cut(s) 15, 332
AjuI GAANNNNNNNTTGG 4 cut(s) 87, 119, 1386, 1418
Alw21I GWGCWC 5 cut(s) 972, 1234, 1420, 1704, 1766
Alw26I GTCTC 6 cut(s) 222, 992, 1006, 1102, 1142, 1759
AlwI GGATC 3 cut(s) 1369, 1487, 1500
AlwNI CAGNNNCTG 2 cut(s) 710, 1544
Ama87I CYCGRG 1 cut(s) 407
Aor13HI TCCGGA 1 cut(s) 1087
AoxI GGCC 2 cut(s) 921, 1508
ApeKI GCWGC 8 cut(s) 194, 592, 1118, 1427, 1469, 1538, 1541, 1727
ApoI RAATTY 1 cut(s) 1648
ArsI GACNNNNNNTTYG 4 cut(s) 984, 1016, 1069, 1101
AspS9I GGNCC 3 cut(s) 900, 1090, 1508
AsuII TTCGAA 1 cut(s) 303
AvaI CYCGRG 1 cut(s) 407
AvaII GGWCC 2 cut(s) 900, 1090
BamHI GGATCC 1 cut(s) 1492
BanII GRGCYC 2 cut(s) 1420, 1766
BauI CACGAG 1 cut(s) 1233
BbsI GAAGAC 1 cut(s) 961
Bbv12I GWGCWC 5 cut(s) 972, 1234, 1420, 1704, 1766
BbvI GCAGC 8 cut(s) 181, 604, 1105, 1439, 1456, 1528, 1550, 1714
BccI CCATC 7 cut(s) 141, 364, 530, 739, 764, 944, 1190
BceAI ACGGC 2 cut(s) 484, 540
BciT130I CCWGG 2 cut(s) 17, 334
BclI TGATCA 1 cut(s) 717
BcoDI GTCTC 6 cut(s) 222, 992, 1006, 1102, 1142, 1759
BfaI CTAG 3 cut(s) 477, 663, 1566
BfmI CTRYAG 2 cut(s) 730, 1033
BfrI CTTAAG 1 cut(s) 116
BfuAI ACCTGC 1 cut(s) 1337
BisI GCNGC 8 cut(s) 195, 593, 1119, 1428, 1470, 1539, 1542, 1728
BlsI GCNGC 8 cut(s) 196, 594, 1120, 1429, 1471, 1540, 1543, 1729
Bme1390I CCNGG 2 cut(s) 17, 334
Bme18I GGWCC 2 cut(s) 900, 1090
BmeT110I CYCGRG 1 cut(s) 407
BmgT120I GGNCC 3 cut(s) 900, 1090, 1508
BmiI GGNNCC 3 cut(s) 105, 902, 1494
BmrFI CCNGG 2 cut(s) 17, 334
BmrI ACTGGG 2 cut(s) 267, 732
BmsI GCATC 8 cut(s) 18, 300, 486, 672, 742, 895, 1374, 1681
BmuI ACTGGG 2 cut(s) 267, 732
BpiI GAAGAC 1 cut(s) 961
Bpu14I TTCGAA 1 cut(s) 303
BpuEI CTTGAG 2 cut(s) 857, 1688
Bsa29I ATCGAT 1 cut(s) 308
BsaI GGTCTC 2 cut(s) 992, 1142
BsaJI CCNNGG 3 cut(s) 16, 342, 1301
BsaWI WCCGGW 2 cut(s) 1087, 1192
BsaXI ACNNNNNCTCC 2 cut(s) 485, 515
Bsc4I CCNNNNNNNGG 4 cut(s) 100, 1174, 1306, 1723
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 6 cut(s) 262, 269, 727, 902, 1434, 1470
Bse3DI GCAATG 2 cut(s) 417, 813
BseAI TCCGGA 1 cut(s) 1087
BseBI CCWGG 2 cut(s) 17, 334
BseCI ATCGAT 1 cut(s) 308
BseDI CCNNGG 3 cut(s) 16, 342, 1301
BseGI GGATG 8 cut(s) 57, 65, 375, 793, 886, 955, 1201, 1672
BseLI CCNNNNNNNGG 4 cut(s) 100, 1174, 1306, 1723
BseMI GCAATG 2 cut(s) 417, 813
BseMII CTCAG 3 cut(s) 26, 331, 1050
BseNI ACTGG 6 cut(s) 262, 269, 727, 902, 1434, 1470
BseRI GAGGAG 1 cut(s) 1588
BseXI GCAGC 8 cut(s) 181, 604, 1105, 1439, 1456, 1528, 1550, 1714
Bsh1285I CGRYCG 1 cut(s) 1307
BshFI GGCC 2 cut(s) 923, 1510
BshVI ATCGAT 1 cut(s) 308
BsiEI CGRYCG 1 cut(s) 1307
BsiHKAI GWGCWC 5 cut(s) 972, 1234, 1420, 1704, 1766
BsiHKCI CYCGRG 1 cut(s) 407
BsiSI CCGG 4 cut(s) 351, 686, 1088, 1193
BslFI GGGAC 1 cut(s) 925
BslI CCNNNNNNNGG 4 cut(s) 100, 1174, 1306, 1723
BsmAI GTCTC 6 cut(s) 222, 992, 1006, 1102, 1142, 1759
BsmFI GGGAC 1 cut(s) 925
BsmI GAATGC 3 cut(s) 436, 780, 808
BsnI GGCC 2 cut(s) 923, 1510
Bso31I GGTCTC 2 cut(s) 992, 1142
BsoBI CYCGRG 1 cut(s) 407
Bsp119I TTCGAA 1 cut(s) 303
Bsp1286I GDGCHC 5 cut(s) 972, 1234, 1420, 1704, 1766
Bsp13I TCCGGA 1 cut(s) 1087
Bsp143I GATC 7 cut(s) 159, 460, 717, 1330, 1374, 1492, 1710
Bsp19I CCATGG 1 cut(s) 342
BspACI CCGC 3 cut(s) 45, 179, 605
BspANI GGCC 2 cut(s) 923, 1510
BspCNI CTCAG 3 cut(s) 27, 330, 1051
BspDI ATCGAT 1 cut(s) 308
BspEI TCCGGA 1 cut(s) 1087
BspLI GGNNCC 3 cut(s) 105, 902, 1494
BspMAI CTGCAG 1 cut(s) 1037
BspMI ACCTGC 1 cut(s) 1337
BspPI GGATC 3 cut(s) 1369, 1487, 1500
BspQI GCTCTTC 2 cut(s) 1425, 1771
BspT104I TTCGAA 1 cut(s) 303
BspTI CTTAAG 1 cut(s) 116
BspTNI GGTCTC 2 cut(s) 992, 1142
BsrBI CCGCTC 1 cut(s) 179
BsrDI GCAATG 2 cut(s) 417, 813
BsrFI RCCGGY 1 cut(s) 350
BsrI ACTGG 6 cut(s) 262, 269, 727, 902, 1434, 1470
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 3 cut(s) 16, 342, 1301
BssMI GATC 7 cut(s) 159, 460, 717, 1330, 1374, 1492, 1710
BssNAI GTATAC 1 cut(s) 142
BssSI CACGAG 1 cut(s) 1233
BssT1I CCWWGG 1 cut(s) 342
Bst1107I GTATAC 1 cut(s) 142
Bst2BI CACGAG 1 cut(s) 1233
Bst2UI CCWGG 2 cut(s) 17, 334
Bst4CI ACNGT 4 cut(s) 207, 275, 619, 1136
Bst6I CTCTTC 2 cut(s) 1425, 1771
BstAFI CTTAAG 1 cut(s) 116
BstAPI GCANNNNNTGC 1 cut(s) 710
BstBI TTCGAA 1 cut(s) 303
BstC8I GCNNGC 4 cut(s) 199, 1321, 1366, 1718
BstDEI CTNAG 5 cut(s) 35, 317, 1059, 1211, 1473
BstDSI CCRYGG 1 cut(s) 342
BstF5I GGATG 8 cut(s) 57, 65, 375, 793, 886, 955, 1201, 1672
BstKTI GATC 7 cut(s) 162, 463, 720, 1333, 1377, 1495, 1713
BstMAI GTCTC 6 cut(s) 222, 992, 1006, 1102, 1142, 1759
BstMBI GATC 7 cut(s) 159, 460, 717, 1330, 1374, 1492, 1710
BstMCI CGRYCG 1 cut(s) 1307
BstMWI GCNNNNNNNGC 5 cut(s) 19, 28, 710, 1124, 1424
BstNI CCWGG 2 cut(s) 17, 334
BstSCI CCNGG 2 cut(s) 15, 332
BstSFI CTRYAG 2 cut(s) 730, 1033
BstV1I GCAGC 8 cut(s) 181, 604, 1105, 1439, 1456, 1528, 1550, 1714
BstV2I GAAGAC 1 cut(s) 961
BstX2I RGATCY 1 cut(s) 1492
BstXI CCANNNNNNTGG 2 cut(s) 897, 1505
BstYI RGATCY 1 cut(s) 1492
BstZ17I GTATAC 1 cut(s) 142
Bsu15I ATCGAT 1 cut(s) 308
BsuRI GGCC 2 cut(s) 923, 1510
BsuTUI ATCGAT 1 cut(s) 308
BtgI CCRYGG 1 cut(s) 342
BtgZI GCGATG 1 cut(s) 542
BtsCI GGATG 8 cut(s) 57, 65, 375, 793, 886, 955, 1201, 1672
BtsI GCAGTG 2 cut(s) 110, 711
BtsIMutI CAGTG 6 cut(s) 110, 711, 720, 1186, 1441, 1756
BveI ACCTGC 1 cut(s) 1337
Cac8I GCNNGC 4 cut(s) 199, 1321, 1366, 1718
CaiI CAGNNNCTG 2 cut(s) 710, 1544
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 3 cut(s) 900, 1090, 1508
ClaI ATCGAT 1 cut(s) 308
CseI GACGC 3 cut(s) 346, 411, 927
Csp6I GTAC 2 cut(s) 262, 1030
CviQI GTAC 2 cut(s) 262, 1030
DdeI CTNAG 5 cut(s) 35, 317, 1059, 1211, 1473
DpnI GATC 7 cut(s) 161, 462, 719, 1332, 1376, 1494, 1712
DpnII GATC 7 cut(s) 159, 460, 717, 1330, 1374, 1492, 1710
DraIII CACNNNGTG 1 cut(s) 726
DrdI GACNNNNNNGTC 2 cut(s) 1277, 1751
DseDI GACNNNNNNGTC 2 cut(s) 1277, 1751
Eam1104I CTCTTC 2 cut(s) 1425, 1771
EarI CTCTTC 2 cut(s) 1425, 1771
Ecl136II GAGCTC 2 cut(s) 1418, 1764
Eco130I CCWWGG 1 cut(s) 342
Eco24I GRGCYC 2 cut(s) 1420, 1766
Eco31I GGTCTC 2 cut(s) 992, 1142
Eco32I GATATC 1 cut(s) 441
Eco47I GGWCC 2 cut(s) 900, 1090
Eco53kI GAGCTC 2 cut(s) 1418, 1764
Eco57I CTGAAG 1 cut(s) 965
Eco88I CYCGRG 1 cut(s) 407
EcoICRI GAGCTC 2 cut(s) 1418, 1764
EcoRII CCWGG 2 cut(s) 15, 332
EcoRV GATATC 1 cut(s) 441
EcoT14I CCWWGG 1 cut(s) 342
EcoT38I GRGCYC 2 cut(s) 1420, 1766
ErhI CCWWGG 1 cut(s) 342
FalI AAGNNNNNCTT 2 cut(s) 1000, 1032
FaqI GGGAC 1 cut(s) 925
FauI CCCGC 1 cut(s) 172
FauNDI CATATG 1 cut(s) 1722
FbaI TGATCA 1 cut(s) 717
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 8 cut(s) 195, 593, 1119, 1428, 1470, 1539, 1542, 1728
FokI GGATG 8 cut(s) 44, 52, 382, 800, 873, 962, 1208, 1659
FriOI GRGCYC 2 cut(s) 1420, 1766
Fsp4HI GCNGC 8 cut(s) 195, 593, 1119, 1428, 1470, 1539, 1542, 1728
FspBI CTAG 3 cut(s) 477, 663, 1566
GluI GCNGC 8 cut(s) 195, 593, 1119, 1428, 1470, 1539, 1542, 1728
HaeIII GGCC 2 cut(s) 923, 1510
HapII CCGG 4 cut(s) 351, 686, 1088, 1193
HgaI GACGC 3 cut(s) 346, 411, 927
HindIII AAGCTT 2 cut(s) 119, 1362
HpaII CCGG 4 cut(s) 351, 686, 1088, 1193
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 4 cut(s) 36, 54, 1060, 1309
Hpy8I GTNNAC 1 cut(s) 142
Hpy99I CGWCG 2 cut(s) 215, 362
HpyAV CCTTC 4 cut(s) 117, 559, 940, 1141
HpyCH4III ACNGT 4 cut(s) 207, 275, 619, 1136
HpyCH4IV ACGT 1 cut(s) 153
HpyF10VI GCNNNNNNNGC 5 cut(s) 19, 28, 710, 1124, 1424
HpyF3I CTNAG 5 cut(s) 35, 317, 1059, 1211, 1473
HpySE526I ACGT 1 cut(s) 153
Kpn2I TCCGGA 1 cut(s) 1087
Ksp22I TGATCA 1 cut(s) 717
Kzo9I GATC 7 cut(s) 159, 460, 717, 1330, 1374, 1492, 1710
LguI GCTCTTC 2 cut(s) 1425, 1771
LmnI GCTCC 4 cut(s) 18, 1309, 1415, 1761
Lsp1109I GCAGC 8 cut(s) 181, 604, 1105, 1439, 1456, 1528, 1550, 1714
LweI GCATC 8 cut(s) 18, 300, 486, 672, 742, 895, 1374, 1681
MaeI CTAG 3 cut(s) 477, 663, 1566
MaeII ACGT 1 cut(s) 153
MaeIII GTNAC 5 cut(s) 235, 253, 275, 706, 855
MalI GATC 7 cut(s) 161, 462, 719, 1332, 1376, 1494, 1712
MbiI CCGCTC 1 cut(s) 179
MboI GATC 7 cut(s) 159, 460, 717, 1330, 1374, 1492, 1710
MboII GAAGA 6 cut(s) 559, 761, 966, 1412, 1720, 1758
MflI RGATCY 1 cut(s) 1492
MhlI GDGCHC 5 cut(s) 972, 1234, 1420, 1704, 1766
MluCI AATT 5 cut(s) 668, 1077, 1326, 1648, 1735
MlyI GAGTC 6 cut(s) 304, 1049, 1093, 1265, 1348, 1605
MmeI TCCRAC 4 cut(s) 779, 1287, 1601, 1636
MroI TCCGGA 1 cut(s) 1087
MseI TTAA 4 cut(s) 117, 978, 1325, 1774
MslI CAYNNNNRTG 3 cut(s) 600, 1446, 1677
MspA1I CMGCKG 1 cut(s) 1541
MspCI CTTAAG 1 cut(s) 116
MspI CCGG 4 cut(s) 351, 686, 1088, 1193
MspR9I CCNGG 2 cut(s) 17, 334
Mva1269I GAATGC 3 cut(s) 436, 780, 808
MvaI CCWGG 2 cut(s) 17, 334
MwoI GCNNNNNNNGC 5 cut(s) 19, 28, 710, 1124, 1424
NcoI CCATGG 1 cut(s) 342
NdeI CATATG 1 cut(s) 1722
NdeII GATC 7 cut(s) 159, 460, 717, 1330, 1374, 1492, 1710
NlaIV GGNNCC 3 cut(s) 105, 902, 1494
NmuCI GTSAC 1 cut(s) 706
NspV TTCGAA 1 cut(s) 303
PciSI GCTCTTC 2 cut(s) 1425, 1771
PctI GAATGC 3 cut(s) 436, 780, 808
PfeI GAWTC 4 cut(s) 287, 305, 992, 1048
PflFI GACNNNGTC 1 cut(s) 1094
PflMI CCANNNNNTGG 1 cut(s) 100
PfoI TCCNGGA 1 cut(s) 332
PkrI GCNGC 8 cut(s) 196, 594, 1120, 1429, 1471, 1540, 1543, 1729
PleI GAGTC 6 cut(s) 303, 1049, 1092, 1265, 1347, 1604
PpsI GAGTC 6 cut(s) 303, 1049, 1092, 1265, 1347, 1604
Psp124BI GAGCTC 2 cut(s) 1420, 1766
Psp6I CCWGG 2 cut(s) 15, 332
PspGI CCWGG 2 cut(s) 15, 332
PspN4I GGNNCC 3 cut(s) 105, 902, 1494
PspPI GGNCC 3 cut(s) 900, 1090, 1508
PstI CTGCAG 1 cut(s) 1037
PstNI CAGNNNCTG 2 cut(s) 710, 1544
PsuI RGATCY 1 cut(s) 1492
PsyI GACNNNGTC 1 cut(s) 1094
PvuII CAGCTG 1 cut(s) 1541
RsaI GTAC 2 cut(s) 263, 1031
RsaNI GTAC 2 cut(s) 262, 1030
RseI CAYNNNNRTG 3 cut(s) 600, 1446, 1677
SacI GAGCTC 2 cut(s) 1420, 1766
SapI GCTCTTC 2 cut(s) 1425, 1771
SaqAI TTAA 4 cut(s) 117, 978, 1325, 1774
SatI GCNGC 8 cut(s) 195, 593, 1119, 1428, 1470, 1539, 1542, 1728
Sau3AI GATC 7 cut(s) 159, 460, 717, 1330, 1374, 1492, 1710
Sau96I GGNCC 3 cut(s) 900, 1090, 1508
SchI GAGTC 6 cut(s) 304, 1049, 1093, 1265, 1348, 1605
ScrFI CCNGG 2 cut(s) 17, 334
SduI GDGCHC 5 cut(s) 972, 1234, 1420, 1704, 1766
SfaNI GCATC 8 cut(s) 18, 300, 486, 672, 742, 895, 1374, 1681
SfcI CTRYAG 2 cut(s) 730, 1033
SfuI TTCGAA 1 cut(s) 303
SinI GGWCC 2 cut(s) 900, 1090
SmiMI CAYNNNNRTG 3 cut(s) 600, 1446, 1677
SmlI CTYRAG 3 cut(s) 116, 872, 1703
SmoI CTYRAG 3 cut(s) 116, 872, 1703
Sse9I AATT 5 cut(s) 668, 1077, 1326, 1648, 1735
SsiI CCGC 3 cut(s) 45, 179, 605
SspI AATATT 1 cut(s) 1690
SspMI CTAG 3 cut(s) 477, 663, 1566
SstI GAGCTC 2 cut(s) 1420, 1766
StyD4I CCNGG 2 cut(s) 15, 332
StyI CCWWGG 1 cut(s) 342
TaaI ACNGT 4 cut(s) 207, 275, 619, 1136
TaiI ACGT 1 cut(s) 156
TaqII GACCGA 1 cut(s) 1293
TasI AATT 5 cut(s) 668, 1077, 1326, 1648, 1735
TatI WGTACW 1 cut(s) 1029
TfiI GAWTC 4 cut(s) 287, 305, 992, 1048
Tru1I TTAA 4 cut(s) 117, 978, 1325, 1774
Tru9I TTAA 4 cut(s) 117, 978, 1325, 1774
TscAI CASTG 6 cut(s) 117, 711, 727, 1186, 1441, 1756
TseFI GTSAC 1 cut(s) 706
TseI GCWGC 8 cut(s) 194, 592, 1118, 1427, 1469, 1538, 1541, 1727
Tsp45I GTSAC 1 cut(s) 706
TspDTI ATGAA 5 cut(s) 54, 672, 1430, 1598, 1682
TspGWI ACGGA 1 cut(s) 58
TspRI CASTG 6 cut(s) 117, 711, 727, 1186, 1441, 1756
Tth111I GACNNNGTC 1 cut(s) 1094
Van91I CCANNNNNTGG 1 cut(s) 100
Vha464I CTTAAG 1 cut(s) 116
VpaK11BI GGWCC 2 cut(s) 900, 1090
XapI RAATTY 1 cut(s) 1648
XmiI GTMKAC 1 cut(s) 141
XspI CTAG 3 cut(s) 477, 663, 1566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.