RchiOBHm_Chr3g0456771

Calmodulin-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0007733
Physical Location & Seq
Reverse (-)
6164149 .. 6166883
2735 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42356

Sequence Viewer

Length: 1539 bp
ATGAATATTGATCGAACTTCTTTGTTGTATAGGTGCGAGATGAGCTGGAAAAATTGCTTGTTCCCTGCCTGGGGGGATCTTCAAGCTGGAGTAAGAGGCCTCCAGTTGCATTTCATCAACAAACTGCCATCAACCATATTCACAGGCAGCAAGGTGGAAGCAGAAGACCAAACACAAACACGTCTTCAAATTGTACTACGTGATGCTGCTACGCAGAATGTAGTCCGTTCTGGTCCCCTGGCTTCAGCAAAGATTGAAATTCTTGTTCTGAATAGCGAATTCGGTTCTGATGATCAAGAGGATTGGACCGAGGAAGAGTTCAGCAATGGTCTTGTTCGAGAACGAGAAGGGAGGAGGCCATTGGTGACTGGTGACGTGACTCTTAACCTGCGGGATGGAGTGTGTTCTCTAGAAAACATTGTCTTCACTGACAATTCGAGCTGGATCAGAAGCCGAAAGTTCAGACTAGGAGCTAGAGCTGTGCCGAAAAATCCTGGCGATGAAGTACGAATCAGGGAAGCTAGAAGTGAGGCTTTTGTGGTAAAAGATCACCGCGGAGAGTTGTACAAGAAACACTACCCTCCATCCCTGGGTGATGAGATATGGCGCCTGGAGAAGATAGCAAAGGACGGCGCCTTCCATAGCAGATTGTCCAATTGTGGAATTACTTGTGTGAAGGACTTGCTGCGGACTTATGTGAAGGATCCATCCTTGCTACGGAATTGTTTTGCTCCGATCTCAAACAAGACATGGCATGTAATCATAGAGCATGCATTGACTTGTGAGATAGATGAACATAAGCTCTATGCTTACCATAGAGATGATGTGGCCCTCCTGTTCAACGAAATCTACATGTTCAAGGGAGCAGTAATTGAGGACCAATTCTGTACTCCGGATCAACTCGCCCCACCTCAAAAGGTTATGGTGGACAATTTGAAGCAGCAGGCGTATAGAAATGAAGTTAATATGGTCCTCATGGATGCTTCGACTGTGTATGGCATTTCAAGGCCTTTGCCGAGTCTACCAGCAGAGCCATTCAATAATCCAAACTCAGATCCGCAACAATATAGTCTCCAATTCCCACAGCAAGATATACCGCCAATGCAATTGGGTTTCCCCCACGCATCACCTTCAACTTCATATCCTTATCAAGCAGAAGGAAGCAATCAGTTCATGGTTTCTGTAGCACAAACTAGTCATCCAATGCAAGTGTTCGCTCCAGGGCTACGCAACAGTTTCTCAATGGAGGAGTTCAGCACCTTAAACTTCAATGCAGAAAACAGTTGGCCTTCAATTGTGTCAACTGCTCATTTAGGCACTACTGAAAATTTTTTACAAACATCAACTTGGTCTCCAATGAACCCAAACTGGGGGGGACAAGGGAACGGATTTTGCGATACTGGCATTTCGGGTTTTTTACATAACGCAGGGACTATAAAGAAACCCAAGGCATGCTGGTGCAAGCTTCGTGCCGCCATTAAATGGTGGGTTTCGGTTAGGGCTAGAAGAATGGCAAGGCCTCTGTATTTGGCCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0002229 GO:0002237 GO:0002239 GO:0002376 GO:0002682 GO:0002831 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006725 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009696 GO:0009697 GO:0009787 GO:0009789 GO:0009814 GO:0009816 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010112 GO:0010224 GO:0010337 GO:0010468 GO:0010556 GO:0010565 GO:0010646 GO:0010647 GO:0010817 GO:0016053 GO:0016999 GO:0017000 GO:0017144 GO:0018958 GO:0019219 GO:0019222 GO:0019438 GO:0019752 GO:0023051 GO:0023056 GO:0031323 GO:0031326 GO:0031347 GO:0032101 GO:0032350 GO:0032787 GO:0033554 GO:0036293 GO:0036294 GO:0042221 GO:0042445 GO:0042446 GO:0042537 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043565 GO:0043900 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0046189 GO:0046394 GO:0046885 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0070482 GO:0070887 GO:0071216 GO:0071219 GO:0071453 GO:0071456 GO:0071704 GO:0072330 GO:0080090 GO:0080134 GO:0080142 GO:0097159 GO:0098542 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901419 GO:1901421 GO:1901576 GO:1901615 GO:1901617 GO:1902584 GO:1903506 GO:1905957 GO:1905959 GO:2000070 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Calmodulin_bind

Protein Analysis

512

Amino Acids

57.9

Weight (kDa)

6.87

Isoelectric Point (pI)

43.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Calmodulin_bind PF07887 34 - 184 7.2e-57 Calmodulin binding protein-like N-terminal domain
Calmod_bind_M PF20451 197 - 261 1.3e-25 Calmodulin binding protein central domain
Calmod_bind_C PF20452 267 - 319 3.5e-14 Calmodulin binding protein C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 396
AccB1I GGYRCC 2 cut(s) 606, 632
AccB7I CCANNNNNTGG 1 cut(s) 1482
AccI GTMKAC 1 cut(s) 1021
AccII CGCG 1 cut(s) 555
AccIII TCCGGA 1 cut(s) 892
AciI CCGC 7 cut(s) 391, 553, 555, 688, 1058, 1097, 1473
AclWI GGATC 6 cut(s) 84, 452, 698, 711, 903, 1049
AcoI YGGCCR 1 cut(s) 1530
AcsI RAATTY 3 cut(s) 258, 278, 1327
AcuI CTGAAG 1 cut(s) 228
AcyI GRCGYC 2 cut(s) 607, 633
AfaI GTAC 4 cut(s) 195, 507, 566, 889
AfiI CCNNNNNNNGG 7 cut(s) 70, 71, 590, 717, 1369, 1370, 1482
AflIII ACRYGT 2 cut(s) 179, 852
AhlI ACTAGT 1 cut(s) 1193
AjiI CACGTC 2 cut(s) 182, 376
AjnI CCWGG 6 cut(s) 68, 237, 493, 588, 609, 1219
AluBI AGCT 9 cut(s) 45, 86, 441, 473, 479, 521, 802, 1465, 1536
AluI AGCT 9 cut(s) 45, 86, 441, 473, 479, 521, 802, 1465, 1536
Alw26I GTCTC 2 cut(s) 1076, 1356
AlwI GGATC 6 cut(s) 84, 452, 698, 711, 903, 1049
Aor13HI TCCGGA 1 cut(s) 892
AoxI GGCC 7 cut(s) 97, 356, 828, 1007, 1286, 1517, 1530
ApeKI GCWGC 4 cut(s) 147, 206, 685, 940
ApoI RAATTY 3 cut(s) 258, 278, 1327
AspLEI GCGC 2 cut(s) 609, 635
AspS9I GGNCC 5 cut(s) 233, 306, 829, 877, 970
AsuHPI GGTGA 5 cut(s) 376, 383, 542, 605, 1119
AvaII GGWCC 4 cut(s) 233, 306, 877, 970
BalI TGGCCA 1 cut(s) 1532
BamHI GGATCC 1 cut(s) 703
BanI GGYRCC 2 cut(s) 606, 632
BbsI GAAGAC 3 cut(s) 171, 176, 415
BbvI GCAGC 4 cut(s) 159, 193, 672, 952
BccI CCATC 4 cut(s) 136, 389, 592, 715
BceAI ACGGC 1 cut(s) 646
BciT130I CCWGG 6 cut(s) 70, 239, 495, 590, 611, 1221
BclI TGATCA 1 cut(s) 292
BcoDI GTCTC 2 cut(s) 1076, 1356
BcuI ACTAGT 1 cut(s) 1193
BfaI CTAG 7 cut(s) 410, 467, 474, 522, 1194, 1503, 1537
BfmI CTRYAG 1 cut(s) 1182
BfoI RGCGCY 2 cut(s) 610, 636
BfuAI ACCTGC 1 cut(s) 396
BisI GCNGC 5 cut(s) 148, 207, 686, 941, 1473
BlsI GCNGC 5 cut(s) 149, 208, 687, 942, 1474
Bme1390I CCNGG 6 cut(s) 70, 239, 495, 590, 611, 1221
Bme18I GGWCC 4 cut(s) 233, 306, 877, 970
BmgBI CACGTC 2 cut(s) 182, 376
BmgT120I GGNCC 5 cut(s) 233, 306, 829, 877, 970
BmiI GGNNCC 4 cut(s) 235, 608, 634, 705
BmrFI CCNGG 6 cut(s) 70, 239, 495, 590, 611, 1221
BmrI ACTGGG 1 cut(s) 1378
BmsI GCATC 3 cut(s) 193, 970, 1133
BmuI ACTGGG 1 cut(s) 1378
BpiI GAAGAC 3 cut(s) 171, 176, 415
BpmI CTGGAG 4 cut(s) 86, 108, 632, 1203
BsaAI YACGTR 1 cut(s) 200
BsaHI GRCGYC 2 cut(s) 607, 633
BsaI GGTCTC 1 cut(s) 1356
BsaJI CCNNGG 8 cut(s) 69, 237, 309, 553, 588, 589, 1220, 1446
BsaWI WCCGGW 1 cut(s) 892
BsaXI ACNNNNNCTCC 2 cut(s) 1336, 1366
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 71, 590, 717, 1369, 1370, 1482
Bse1I ACTGG 4 cut(s) 103, 373, 1373, 1405
Bse3DI GCAATG 1 cut(s) 331
BseAI TCCGGA 1 cut(s) 892
BseBI CCWGG 6 cut(s) 70, 239, 495, 590, 611, 1221
BseDI CCNNGG 8 cut(s) 69, 237, 309, 553, 588, 589, 1220, 1446
BseGI GGATG 5 cut(s) 400, 584, 707, 985, 1198
BseLI CCNNNNNNNGG 7 cut(s) 70, 71, 590, 717, 1369, 1370, 1482
BseMI GCAATG 1 cut(s) 331
BseMII CTCAG 1 cut(s) 1065
BseNI ACTGG 4 cut(s) 103, 373, 1373, 1405
BseRI GAGGAG 2 cut(s) 367, 1262
BseXI GCAGC 4 cut(s) 159, 193, 672, 952
Bsh1236I CGCG 1 cut(s) 555
BshFI GGCC 7 cut(s) 99, 358, 830, 1009, 1288, 1519, 1532
BshNI GGYRCC 2 cut(s) 606, 632
BsiSI CCGG 1 cut(s) 893
BslFI GGGAC 3 cut(s) 219, 1389, 1444
BslI CCNNNNNNNGG 7 cut(s) 70, 71, 590, 717, 1369, 1370, 1482
BsmAI GTCTC 2 cut(s) 1076, 1356
BsmFI GGGAC 3 cut(s) 219, 1389, 1444
BsnI GGCC 7 cut(s) 99, 358, 830, 1009, 1288, 1519, 1532
Bso31I GGTCTC 1 cut(s) 1356
Bsp13I TCCGGA 1 cut(s) 892
Bsp1407I TGTACA 1 cut(s) 564
Bsp143I GATC 9 cut(s) 10, 76, 292, 444, 547, 703, 735, 895, 1054
BspACI CCGC 7 cut(s) 391, 553, 555, 688, 1058, 1097, 1473
BspANI GGCC 7 cut(s) 99, 358, 830, 1009, 1288, 1519, 1532
BspCNI CTCAG 1 cut(s) 1064
BspEI TCCGGA 1 cut(s) 892
BspFNI CGCG 1 cut(s) 555
BspLI GGNNCC 4 cut(s) 235, 608, 634, 705
BspMI ACCTGC 1 cut(s) 396
BspPI GGATC 6 cut(s) 84, 452, 698, 711, 903, 1049
BspT107I GGYRCC 2 cut(s) 606, 632
BspTNI GGTCTC 1 cut(s) 1356
BsrDI GCAATG 1 cut(s) 331
BsrGI TGTACA 1 cut(s) 564
BsrI ACTGG 4 cut(s) 103, 373, 1373, 1405
BssECI CCNNGG 8 cut(s) 69, 237, 309, 553, 588, 589, 1220, 1446
BssMI GATC 9 cut(s) 10, 76, 292, 444, 547, 703, 735, 895, 1054
BssNI GRCGYC 2 cut(s) 607, 633
BssT1I CCWWGG 1 cut(s) 1446
Bst2UI CCWGG 6 cut(s) 70, 239, 495, 590, 611, 1221
Bst4CI ACNGT 3 cut(s) 991, 1235, 1283
Bst6I CTCTTC 1 cut(s) 309
BstACI GRCGYC 2 cut(s) 607, 633
BstAUI TGTACA 1 cut(s) 564
BstBAI YACGTR 1 cut(s) 200
BstC8I GCNNGC 5 cut(s) 771, 945, 1453, 1463, 1534
BstDEI CTNAG 1 cut(s) 1051
BstDSI CCRYGG 1 cut(s) 553
BstF5I GGATG 5 cut(s) 400, 584, 707, 985, 1198
BstFNI CGCG 1 cut(s) 555
BstH2I RGCGCY 2 cut(s) 610, 636
BstHHI GCGC 2 cut(s) 609, 635
BstKTI GATC 9 cut(s) 13, 79, 295, 447, 550, 706, 738, 898, 1057
BstMAI GTCTC 2 cut(s) 1076, 1356
BstMBI GATC 9 cut(s) 10, 76, 292, 444, 547, 703, 735, 895, 1054
BstMWI GCNNNNNNNGC 2 cut(s) 42, 1401
BstNI CCWGG 6 cut(s) 70, 239, 495, 590, 611, 1221
BstNSI RCATGY 4 cut(s) 758, 773, 856, 1455
BstSCI CCNGG 6 cut(s) 68, 237, 493, 588, 609, 1219
BstSFI CTRYAG 1 cut(s) 1182
BstUI CGCG 1 cut(s) 555
BstV1I GCAGC 4 cut(s) 159, 193, 672, 952
BstV2I GAAGAC 3 cut(s) 171, 176, 415
BstX2I RGATCY 3 cut(s) 76, 703, 1054
BstYI RGATCY 3 cut(s) 76, 703, 1054
BsuRI GGCC 7 cut(s) 99, 358, 830, 1009, 1288, 1519, 1532
BtgI CCRYGG 1 cut(s) 553
BtgZI GCGATG 1 cut(s) 513
BtrI CACGTC 2 cut(s) 182, 376
BtsCI GGATG 5 cut(s) 400, 584, 707, 985, 1198
BtsIMutI CAGTG 1 cut(s) 426
BveI ACCTGC 1 cut(s) 396
Cac8I GCNNGC 5 cut(s) 771, 945, 1453, 1463, 1534
CfoI GCGC 2 cut(s) 609, 635
Cfr13I GGNCC 5 cut(s) 233, 306, 829, 877, 970
Cfr42I CCGCGG 1 cut(s) 556
Csp6I GTAC 4 cut(s) 194, 506, 565, 888
CviAII CATG 7 cut(s) 750, 755, 770, 853, 976, 1174, 1452
CviQI GTAC 4 cut(s) 194, 506, 565, 888
DdeI CTNAG 1 cut(s) 1051
DinI GGCGCC 2 cut(s) 608, 634
DpnI GATC 9 cut(s) 12, 78, 294, 446, 549, 705, 737, 897, 1056
DpnII GATC 9 cut(s) 10, 76, 292, 444, 547, 703, 735, 895, 1054
EaeI YGGCCR 1 cut(s) 1530
Eam1104I CTCTTC 1 cut(s) 309
EarI CTCTTC 1 cut(s) 309
Eco130I CCWWGG 1 cut(s) 1446
Eco147I AGGCCT 3 cut(s) 99, 1009, 1519
Eco31I GGTCTC 1 cut(s) 1356
Eco47I GGWCC 4 cut(s) 233, 306, 877, 970
Eco57I CTGAAG 1 cut(s) 228
EcoRI GAATTC 1 cut(s) 278
EcoRII CCWGG 6 cut(s) 68, 237, 493, 588, 609, 1219
EcoT14I CCWWGG 1 cut(s) 1446
EcoT22I ATGCAT 1 cut(s) 775
EgeI GGCGCC 2 cut(s) 608, 634
EheI GGCGCC 2 cut(s) 608, 634
ErhI CCWWGG 1 cut(s) 1446
FaeI CATG 7 cut(s) 753, 758, 773, 856, 979, 1177, 1455
FalI AAGNNNNNCTT 2 cut(s) 517, 549
FaqI GGGAC 3 cut(s) 219, 1389, 1444
FatI CATG 7 cut(s) 749, 754, 769, 852, 975, 1173, 1451
FauI CCCGC 1 cut(s) 384
FbaI TGATCA 1 cut(s) 292
FblI GTMKAC 1 cut(s) 1021
Fnu4HI GCNGC 5 cut(s) 148, 207, 686, 941, 1473
FokI GGATG 5 cut(s) 407, 571, 694, 992, 1185
Fsp4HI GCNGC 5 cut(s) 148, 207, 686, 941, 1473
FspBI CTAG 7 cut(s) 410, 467, 474, 522, 1194, 1503, 1537
GlaI GCGC 2 cut(s) 608, 634
GluI GCNGC 5 cut(s) 148, 207, 686, 941, 1473
GsuI CTGGAG 4 cut(s) 86, 108, 632, 1203
HaeII RGCGCY 2 cut(s) 610, 636
HaeIII GGCC 7 cut(s) 99, 358, 830, 1009, 1288, 1519, 1532
HapII CCGG 1 cut(s) 893
HhaI GCGC 2 cut(s) 609, 635
Hin1I GRCGYC 2 cut(s) 607, 633
Hin1II CATG 7 cut(s) 753, 758, 773, 856, 979, 1177, 1455
Hin6I GCGC 2 cut(s) 607, 633
HinP1I GCGC 2 cut(s) 607, 633
HincII GTYRAC 1 cut(s) 1302
HindII GTYRAC 1 cut(s) 1302
HindIII AAGCTT 1 cut(s) 1463
HinfI GANTC 3 cut(s) 379, 510, 1018
HpaII CCGG 1 cut(s) 893
HphI GGTGA 5 cut(s) 376, 383, 542, 605, 1119
Hpy166II GTNNAC 3 cut(s) 928, 1022, 1302
Hpy188I TCNGA 6 cut(s) 270, 289, 449, 464, 735, 1054
Hpy188III TCNNGA 4 cut(s) 296, 338, 410, 893
Hpy8I GTNNAC 3 cut(s) 928, 1022, 1302
HpyAV CCTTC 7 cut(s) 341, 646, 670, 694, 1140, 1151, 1299
HpyCH4III ACNGT 3 cut(s) 991, 1235, 1283
HpyCH4IV ACGT 3 cut(s) 181, 199, 375
HpyCH4V TGCA 6 cut(s) 109, 773, 1105, 1207, 1274, 1461
HpyF10VI GCNNNNNNNGC 2 cut(s) 42, 1401
HpyF3I CTNAG 1 cut(s) 1051
HpySE526I ACGT 3 cut(s) 181, 199, 375
Hsp92I GRCGYC 2 cut(s) 607, 633
Hsp92II CATG 7 cut(s) 753, 758, 773, 856, 979, 1177, 1455
HspAI GCGC 2 cut(s) 607, 633
KasI GGCGCC 2 cut(s) 606, 632
Kpn2I TCCGGA 1 cut(s) 892
Ksp22I TGATCA 1 cut(s) 292
KspI CCGCGG 1 cut(s) 556
Kzo9I GATC 9 cut(s) 10, 76, 292, 444, 547, 703, 735, 895, 1054
LmnI GCTCC 4 cut(s) 470, 736, 863, 1222
Lsp1109I GCAGC 4 cut(s) 159, 193, 672, 952
LweI GCATC 3 cut(s) 193, 970, 1133
MaeI CTAG 7 cut(s) 410, 467, 474, 522, 1194, 1503, 1537
MaeII ACGT 3 cut(s) 181, 199, 375
MaeIII GTNAC 3 cut(s) 364, 371, 376
MalI GATC 9 cut(s) 12, 78, 294, 446, 549, 705, 737, 897, 1056
MboI GATC 9 cut(s) 10, 76, 292, 444, 547, 703, 735, 895, 1054
MboII GAAGA 7 cut(s) 71, 176, 176, 326, 415, 628, 1518
MfeI CAATTG 3 cut(s) 655, 1106, 1293
MflI RGATCY 3 cut(s) 76, 703, 1054
MlsI TGGCCA 1 cut(s) 1532
MluNI TGGCCA 1 cut(s) 1532
Mly113I GGCGCC 2 cut(s) 607, 633
MlyI GAGTC 2 cut(s) 373, 1027
Mox20I TGGCCA 1 cut(s) 1532
Mph1103I ATGCAT 1 cut(s) 775
MroI TCCGGA 1 cut(s) 892
MscI TGGCCA 1 cut(s) 1532
MseI TTAA 4 cut(s) 384, 963, 1262, 1479
MslI CAYNNNNRTG 2 cut(s) 819, 1456
Msp20I TGGCCA 1 cut(s) 1532
MspA1I CMGCKG 1 cut(s) 555
MspI CCGG 1 cut(s) 893
MspR9I CCNGG 6 cut(s) 70, 239, 495, 590, 611, 1221
MunI CAATTG 3 cut(s) 655, 1106, 1293
MvaI CCWGG 6 cut(s) 70, 239, 495, 590, 611, 1221
MvnI CGCG 1 cut(s) 555
MwoI GCNNNNNNNGC 2 cut(s) 42, 1401
NarI GGCGCC 2 cut(s) 607, 633
NdeII GATC 9 cut(s) 10, 76, 292, 444, 547, 703, 735, 895, 1054
NlaIII CATG 7 cut(s) 753, 758, 773, 856, 979, 1177, 1455
NlaIV GGNNCC 4 cut(s) 235, 608, 634, 705
NmeAIII GCCGAG 1 cut(s) 1041
NmuCI GTSAC 3 cut(s) 364, 371, 376
NsiI ATGCAT 1 cut(s) 775
NspI RCATGY 4 cut(s) 758, 773, 856, 1455
PaeI GCATGC 2 cut(s) 773, 1455
PasI CCCWGGG 1 cut(s) 589
PceI AGGCCT 3 cut(s) 99, 1009, 1519
PciI ACATGT 1 cut(s) 852
PcsI WCGNNNNNNNCGW 1 cut(s) 1392
PfeI GAWTC 1 cut(s) 510
PflMI CCANNNNNTGG 1 cut(s) 1482
PkrI GCNGC 5 cut(s) 149, 208, 687, 942, 1474
PleI GAGTC 2 cut(s) 373, 1026
PluTI GGCGCC 2 cut(s) 610, 636
PpsI GAGTC 2 cut(s) 373, 1026
Ppu21I YACGTR 1 cut(s) 200
PscI ACATGT 1 cut(s) 852
Psp6I CCWGG 6 cut(s) 68, 237, 493, 588, 609, 1219
PspGI CCWGG 6 cut(s) 68, 237, 493, 588, 609, 1219
PspN4I GGNNCC 4 cut(s) 235, 608, 634, 705
PspPI GGNCC 5 cut(s) 233, 306, 829, 877, 970
PsuI RGATCY 3 cut(s) 76, 703, 1054
RsaI GTAC 4 cut(s) 195, 507, 566, 889
RsaNI GTAC 4 cut(s) 194, 506, 565, 888
RseI CAYNNNNRTG 2 cut(s) 819, 1456
SacII CCGCGG 1 cut(s) 556
SaqAI TTAA 4 cut(s) 384, 963, 1262, 1479
SatI GCNGC 5 cut(s) 148, 207, 686, 941, 1473
Sau3AI GATC 9 cut(s) 10, 76, 292, 444, 547, 703, 735, 895, 1054
Sau96I GGNCC 5 cut(s) 233, 306, 829, 877, 970
SchI GAGTC 2 cut(s) 373, 1027
ScrFI CCNGG 6 cut(s) 70, 239, 495, 590, 611, 1221
SfaNI GCATC 3 cut(s) 193, 970, 1133
SfcI CTRYAG 1 cut(s) 1182
SfoI GGCGCC 2 cut(s) 608, 634
Sfr303I CCGCGG 1 cut(s) 556
SgrBI CCGCGG 1 cut(s) 556
SinI GGWCC 4 cut(s) 233, 306, 877, 970
SmiMI CAYNNNNRTG 2 cut(s) 819, 1456
SpeI ACTAGT 1 cut(s) 1193
SphI GCATGC 2 cut(s) 773, 1455
SseBI AGGCCT 3 cut(s) 99, 1009, 1519
SsiI CCGC 7 cut(s) 391, 553, 555, 688, 1058, 1097, 1473
SspDI GGCGCC 2 cut(s) 606, 632
SspI AATATT 1 cut(s) 7
SspMI CTAG 7 cut(s) 410, 467, 474, 522, 1194, 1503, 1537
StuI AGGCCT 3 cut(s) 99, 1009, 1519
StyD4I CCNGG 6 cut(s) 68, 237, 493, 588, 609, 1219
StyI CCWWGG 1 cut(s) 1446
TaaI ACNGT 3 cut(s) 991, 1235, 1283
TaiI ACGT 3 cut(s) 184, 202, 378
TaqI TCGA 4 cut(s) 13, 337, 437, 986
TaqII GACCGA 1 cut(s) 323
TatI WGTACW 3 cut(s) 193, 564, 887
TauI GCSGC 1 cut(s) 1475
TfiI GAWTC 1 cut(s) 510
Tru1I TTAA 4 cut(s) 384, 963, 1262, 1479
Tru9I TTAA 4 cut(s) 384, 963, 1262, 1479
TscAI CASTG 1 cut(s) 433
TseFI GTSAC 3 cut(s) 364, 371, 376
TseI GCWGC 4 cut(s) 147, 206, 685, 940
Tsp45I GTSAC 3 cut(s) 364, 371, 376
TspDTI ATGAA 8 cut(s) 17, 103, 516, 807, 972, 1128, 1162, 1373
TspGWI ACGGA 3 cut(s) 215, 733, 1401
TspRI CASTG 1 cut(s) 433
Van91I CCANNNNNTGG 1 cut(s) 1482
VpaK11BI GGWCC 4 cut(s) 233, 306, 877, 970
XapI RAATTY 3 cut(s) 258, 278, 1327
XbaI TCTAGA 1 cut(s) 409
XceI RCATGY 4 cut(s) 758, 773, 856, 1455
XmiI GTMKAC 1 cut(s) 1021
XspI CTAG 7 cut(s) 410, 467, 474, 522, 1194, 1503, 1537
Zsp2I ATGCAT 1 cut(s) 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.