RchiOBHm_Chr3g0460951

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
9007366 .. 9010349
2984 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42743

Sequence Viewer

Length: 1425 bp
ATGGAAAACAAAGGGAGTGTGCTGATGCAGCGATATGAATTGGGTAGATTGTTAGGCCAAGGAACCTTTGCCAAGGTATACCATGCTAGGAACCTCAAAACTGGCATGAGTGTGGCCATAAAGATGATTGATAAAGAGAGGGTCTTGAAGGTCGGGATGATTGATCAGATCAAGCGTGAAATTTCTGTGATGCGATTGATTAGACATCCAAATGTGGTGGAGCTTTACGAGGTAATGGCCAGCAAAACCAAGATTTACTTTGTCATGGAGTATGTCAAAGGTGGTGAGCTCTTCAACAAGGTTTCCAAAGGCAAGCTAAAGGAGGATGATGCTAGAAAGTATTTTCAACAGCTCATCAGTGCTGTTGACTACTGCCACAGTAGAGGTGTATACCATCGTGATCTGAAACCGGAAAACCTACTTTTGGATGAGAATGGAAATCTAAAGGTTTCAGATTTCGGACTGAGTGCCCTTGGTGAATCCAAGCGCCAAGATGGATTGCTTCATACAACCTGTGGGACTCCTGCATATGTTGCCCCAGAAGTAATAAACAGGAAAGGCTATGATGGTGCCAAAGCTGACATTTGGTCGTGTGGGGTGATATTATATGTTCTATTGGCTGGCTATCTTCCATTTCATGATGCAAATCTGATGGAGTTGTATAGGAAGATTGGTAAGGGGGAATTCAAATTCCCTAACTGGTTTACTCCTGAAGTACGCAGGTTGCTGTCAAAGATATTCGACCCAAATCCAAATACTCGGATATCTTTGTCTAAAATAATGCAATCTTCTTGGTTCCGTAAGGGGCTGGTCCAAAAGCCTGCGATTGCTGAAGTACCAGTGAAAGAGCTATCCCCTCTGGATGCTGATGCCATTTTTGGACCTGGTGGAGATAACAATTCTGTGACAGAGGCAAAGCAAGAATTAGCGCAGAAGCCGTCTAACTTGAACGCTTTTGATATCATCTCCTACTCGGCTGGCTTTGACTTGTCTGGACTGTTTGAGGAGGCTGAACAGAAAAAAGAAGTGCGGTTTACATCCAACAAAACTGCTTCAACCATCATCAGCAAGCTGGAAGACATAGCCAAGCGTCTGAGACTTAAAATCAAGAAGAAGGATGGAGGGTTGTTGAGAATGGAAGGGTCCACGGAAGGCAGGAAGGGGGTTTTAGGTATTGAAACTGAGATCTTTGAGATCACCCCGTCTTTTCACTTGGTGGAGGTGAAGAAGTCTAGTGGAGATACATTAGAGTATCAGAAGGTCATGAAAAAGGAGGTGAGACCAGGTCTCAAGGACATTGTTTGGACTTGGCAAGGGGAGCAACAGCCGCAGCAACAAGAGCCACCACAACCAGAGCAGCAAGGGCAGCAAGAACAACCACCTTTGGTGCTCCCAGTTGAAGTCGTCTCTCCCCTGGAGGCATAA

Protein Analysis

474

Amino Acids

53.47

Weight (kDa)

9.0

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 12 - 266 3.2e-78 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 13 - 262 2.8e-43 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 103 - 250 6.2e-07 Kinase-like
NAF PF03822 313 - 371 9.2e-24 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014952)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01810 AT5G01810 AT5G01810
fragaria_vesca FvH4_6g10210
malus_domestica MD04G1171600.v1.1 MD12G1185000.v1.1
prunus_persica Prupe.6G290400_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0460951
rosa_laevigata RLG00000024964
rosa_multiflora Rmu_sc0021377.1_g000007
rosa_roxburghii Rroxscaffold_6G00419010
rosa_rugosa Rorug03G0047100
rosa_samantha Rh3AG104600 Rh3BG108300 Rh3DG110100
rosa_wichuraiana Rw3G008920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 711
AccB1I GGYRCC 1 cut(s) 569
AccI GTMKAC 2 cut(s) 78, 390
AciI CCGC 2 cut(s) 1030, 1328
AcoI YGGCCR 2 cut(s) 114, 237
AcsI RAATTY 3 cut(s) 180, 683, 689
AcuI CTGAAG 2 cut(s) 732, 852
AdeI CACNNNGTG 1 cut(s) 1216
AfaI GTAC 2 cut(s) 717, 837
AfiI CCNNNNNNNGG 1 cut(s) 424
AgsI TTSAA 8 cut(s) 148, 295, 347, 688, 949, 1056, 1178, 1400
AhdI GACNNNNNGTC 1 cut(s) 586
AjnI CCWGG 3 cut(s) 883, 1282, 1413
AluBI AGCT 7 cut(s) 223, 289, 316, 352, 578, 850, 1072
AluI AGCT 7 cut(s) 223, 289, 316, 352, 578, 850, 1072
Alw21I GWGCWC 2 cut(s) 291, 1392
Alw26I GTCTC 4 cut(s) 1090, 1273, 1292, 1411
AoxI GGCC 3 cut(s) 55, 114, 237
ApeKI GCWGC 4 cut(s) 28, 1330, 1357, 1366
ApoI RAATTY 3 cut(s) 180, 683, 689
AspLEI GCGC 2 cut(s) 489, 931
AspS9I GGNCC 3 cut(s) 811, 881, 1143
AsuHPI GGTGA 6 cut(s) 296, 488, 610, 1189, 1234, 1288
AvaII GGWCC 3 cut(s) 811, 881, 1143
BaeGI GKGCMC 1 cut(s) 472
BalI TGGCCA 2 cut(s) 116, 239
BanI GGYRCC 1 cut(s) 569
BanII GRGCYC 1 cut(s) 291
BbsI GAAGAC 1 cut(s) 1083
Bbv12I GWGCWC 2 cut(s) 291, 1392
BbvI GCAGC 4 cut(s) 40, 1342, 1369, 1378
BccI CCATC 6 cut(s) 402, 488, 560, 646, 1067, 1112
BceAI ACGGC 1 cut(s) 922
BciT130I CCWGG 3 cut(s) 885, 1284, 1415
BclI TGATCA 1 cut(s) 163
BcoDI GTCTC 4 cut(s) 1090, 1273, 1292, 1411
BfaI CTAG 3 cut(s) 87, 333, 1233
BfoI RGCGCY 1 cut(s) 490
BfuAI ACCTGC 1 cut(s) 711
BglII AGATCT 1 cut(s) 1185
BisI GCNGC 5 cut(s) 29, 1328, 1331, 1358, 1367
BlsI GCNGC 5 cut(s) 30, 1329, 1332, 1359, 1368
Bme1390I CCNGG 3 cut(s) 885, 1284, 1415
Bme18I GGWCC 3 cut(s) 811, 881, 1143
BmeRI GACNNNNNGTC 1 cut(s) 586
BmgT120I GGNCC 3 cut(s) 811, 881, 1143
BmiI GGNNCC 5 cut(s) 64, 92, 571, 797, 1144
BmrFI CCNGG 3 cut(s) 885, 1284, 1415
BmrI ACTGGG 1 cut(s) 1388
BmsI GCATC 6 cut(s) 15, 180, 319, 631, 853, 859
BmuI ACTGGG 1 cut(s) 1388
BpiI GAAGAC 1 cut(s) 1083
BpuEI CTTGAG 1 cut(s) 1274
BsaBI GATNNNNATC 1 cut(s) 645
BsaI GGTCTC 2 cut(s) 1273, 1292
BsaJI CCNNGG 5 cut(s) 58, 72, 472, 1146, 1413
BsaWI WCCGGW 1 cut(s) 409
Bsc4I CCNNNNNNNGG 1 cut(s) 424
Bse1I ACTGG 4 cut(s) 106, 704, 839, 1394
Bse8I GATNNNNATC 1 cut(s) 645
BseBI CCWGG 3 cut(s) 885, 1284, 1415
BseDI CCNNGG 5 cut(s) 58, 72, 472, 1146, 1413
BseGI GGATG 7 cut(s) 162, 205, 331, 433, 868, 1037, 1123
BseJI GATNNNNATC 1 cut(s) 645
BseLI CCNNNNNNNGG 1 cut(s) 424
BseMII CTCAG 3 cut(s) 455, 1085, 1173
BseNI ACTGG 4 cut(s) 106, 704, 839, 1394
BseRI GAGGAG 1 cut(s) 1019
BseSI GKGCMC 1 cut(s) 472
BseXI GCAGC 4 cut(s) 40, 1342, 1369, 1378
BshFI GGCC 3 cut(s) 57, 116, 239
BshNI GGYRCC 1 cut(s) 569
BsiHKAI GWGCWC 2 cut(s) 291, 1392
BsiSI CCGG 1 cut(s) 410
BslFI GGGAC 1 cut(s) 532
BslI CCNNNNNNNGG 1 cut(s) 424
BsmAI GTCTC 4 cut(s) 1090, 1273, 1292, 1411
BsmBI CGTCTC 1 cut(s) 1411
BsmFI GGGAC 1 cut(s) 532
BsnI GGCC 3 cut(s) 57, 116, 239
Bso31I GGTCTC 2 cut(s) 1273, 1292
Bsp1286I GDGCHC 3 cut(s) 291, 472, 1392
Bsp143I GATC 5 cut(s) 163, 168, 400, 1185, 1194
BspACI CCGC 2 cut(s) 1030, 1328
BspANI GGCC 3 cut(s) 57, 116, 239
BspCNI CTCAG 3 cut(s) 456, 1086, 1174
BspHI TCATGA 2 cut(s) 637, 1263
BspLI GGNNCC 5 cut(s) 64, 92, 571, 797, 1144
BspMI ACCTGC 1 cut(s) 711
BspQI GCTCTTC 1 cut(s) 296
BspT107I GGYRCC 1 cut(s) 569
BspTNI GGTCTC 2 cut(s) 1273, 1292
BsrI ACTGG 4 cut(s) 106, 704, 839, 1394
BssECI CCNNGG 5 cut(s) 58, 72, 472, 1146, 1413
BssMI GATC 5 cut(s) 163, 168, 400, 1185, 1194
BssNAI GTATAC 2 cut(s) 79, 391
BssT1I CCWWGG 3 cut(s) 58, 72, 472
Bst1107I GTATAC 2 cut(s) 79, 391
Bst2UI CCWGG 3 cut(s) 885, 1284, 1415
Bst4CI ACNGT 2 cut(s) 380, 999
Bst6I CTCTTC 1 cut(s) 296
BstAPI GCANNNNNTGC 1 cut(s) 533
BstC8I GCNNGC 6 cut(s) 241, 314, 622, 822, 979, 1070
BstDEI CTNAG 3 cut(s) 464, 1094, 1182
BstDSI CCRYGG 1 cut(s) 1146
BstF5I GGATG 7 cut(s) 162, 205, 331, 433, 868, 1037, 1123
BstH2I RGCGCY 1 cut(s) 490
BstHHI GCGC 2 cut(s) 489, 931
BstKTI GATC 5 cut(s) 166, 171, 403, 1188, 1197
BstMAI GTCTC 4 cut(s) 1090, 1273, 1292, 1411
BstMBI GATC 5 cut(s) 163, 168, 400, 1185, 1194
BstMWI GCNNNNNNNGC 7 cut(s) 28, 533, 1318, 1327, 1339, 1363, 1366
BstNI CCWGG 3 cut(s) 885, 1284, 1415
BstSCI CCNGG 3 cut(s) 883, 1282, 1413
BstSLI GKGCMC 1 cut(s) 472
BstV1I GCAGC 4 cut(s) 40, 1342, 1369, 1378
BstV2I GAAGAC 1 cut(s) 1083
BstX2I RGATCY 1 cut(s) 1185
BstYI RGATCY 1 cut(s) 1185
BstZ17I GTATAC 2 cut(s) 79, 391
BsuRI GGCC 3 cut(s) 57, 116, 239
BtgI CCRYGG 1 cut(s) 1146
BtsCI GGATG 7 cut(s) 162, 205, 331, 433, 868, 1037, 1123
BtsIMutI CAGTG 2 cut(s) 364, 846
BveI ACCTGC 1 cut(s) 711
Cac8I GCNNGC 6 cut(s) 241, 314, 622, 822, 979, 1070
CciI TCATGA 2 cut(s) 637, 1263
CfoI GCGC 2 cut(s) 489, 931
Cfr13I GGNCC 3 cut(s) 811, 881, 1143
CseI GACGC 1 cut(s) 1079
CsiI ACCWGGT 2 cut(s) 883, 1282
Csp6I GTAC 2 cut(s) 716, 836
CspCI CAANNNNNGTGG 2 cut(s) 198, 233
CviAII CATG 5 cut(s) 83, 106, 265, 638, 1264
CviQI GTAC 2 cut(s) 716, 836
DdeI CTNAG 3 cut(s) 464, 1094, 1182
DpnI GATC 5 cut(s) 165, 170, 402, 1187, 1196
DpnII GATC 5 cut(s) 163, 168, 400, 1185, 1194
DraIII CACNNNGTG 1 cut(s) 1216
DriI GACNNNNNGTC 1 cut(s) 586
EaeI YGGCCR 2 cut(s) 114, 237
Eam1104I CTCTTC 1 cut(s) 296
Eam1105I GACNNNNNGTC 1 cut(s) 586
EarI CTCTTC 1 cut(s) 296
Ecl136II GAGCTC 1 cut(s) 289
Eco130I CCWWGG 3 cut(s) 58, 72, 472
Eco24I GRGCYC 1 cut(s) 291
Eco31I GGTCTC 2 cut(s) 1273, 1292
Eco32I GATATC 2 cut(s) 765, 961
Eco47I GGWCC 3 cut(s) 811, 881, 1143
Eco53kI GAGCTC 1 cut(s) 289
Eco57I CTGAAG 2 cut(s) 732, 852
EcoICRI GAGCTC 1 cut(s) 289
EcoRI GAATTC 1 cut(s) 683
EcoRII CCWGG 3 cut(s) 883, 1282, 1413
EcoRV GATATC 2 cut(s) 765, 961
EcoT14I CCWWGG 3 cut(s) 58, 72, 472
EcoT38I GRGCYC 1 cut(s) 291
ErhI CCWWGG 3 cut(s) 58, 72, 472
Esp3I CGTCTC 1 cut(s) 1411
FaeI CATG 5 cut(s) 86, 109, 268, 641, 1267
FalI AAGNNNNNCTT 2 cut(s) 242, 274
FaqI GGGAC 1 cut(s) 532
FatI CATG 5 cut(s) 82, 105, 264, 637, 1263
FauNDI CATATG 1 cut(s) 529
FbaI TGATCA 1 cut(s) 163
FblI GTMKAC 2 cut(s) 78, 390
Fnu4HI GCNGC 5 cut(s) 29, 1328, 1331, 1358, 1367
FokI GGATG 7 cut(s) 169, 192, 338, 440, 875, 1024, 1130
FriOI GRGCYC 1 cut(s) 291
Fsp4HI GCNGC 5 cut(s) 29, 1328, 1331, 1358, 1367
FspBI CTAG 3 cut(s) 87, 333, 1233
GlaI GCGC 2 cut(s) 488, 930
GluI GCNGC 5 cut(s) 29, 1328, 1331, 1358, 1367
HaeII RGCGCY 1 cut(s) 490
HaeIII GGCC 3 cut(s) 57, 116, 239
HapII CCGG 1 cut(s) 410
HgaI GACGC 1 cut(s) 1079
HhaI GCGC 2 cut(s) 489, 931
Hin1II CATG 5 cut(s) 86, 109, 268, 641, 1267
Hin6I GCGC 2 cut(s) 487, 929
HinP1I GCGC 2 cut(s) 487, 929
HincII GTYRAC 1 cut(s) 367
HindII GTYRAC 1 cut(s) 367
HinfI GANTC 2 cut(s) 479, 520
HpaII CCGG 1 cut(s) 410
HphI GGTGA 6 cut(s) 296, 488, 610, 1189, 1234, 1288
Hpy166II GTNNAC 6 cut(s) 79, 367, 391, 705, 1035, 1146
Hpy188I TCNGA 8 cut(s) 168, 405, 454, 461, 651, 762, 1095, 1257
Hpy188III TCNNGA 9 cut(s) 145, 154, 398, 638, 710, 860, 993, 1108, 1264
Hpy8I GTNNAC 6 cut(s) 79, 367, 391, 705, 1035, 1146
HpyAV CCTTC 6 cut(s) 142, 1108, 1133, 1145, 1153, 1252
HpyCH4III ACNGT 2 cut(s) 380, 999
HpyCH4V TGCA 4 cut(s) 28, 527, 644, 784
HpyF10VI GCNNNNNNNGC 7 cut(s) 28, 533, 1318, 1327, 1339, 1363, 1366
HpyF3I CTNAG 3 cut(s) 464, 1094, 1182
Hsp92II CATG 5 cut(s) 86, 109, 268, 641, 1267
HspAI GCGC 2 cut(s) 487, 929
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 5 cut(s) 163, 168, 400, 1185, 1194
LguI GCTCTTC 1 cut(s) 296
LmnI GCTCC 3 cut(s) 220, 1318, 1395
Lsp1109I GCAGC 4 cut(s) 40, 1342, 1369, 1378
LweI GCATC 6 cut(s) 15, 180, 319, 631, 853, 859
MabI ACCWGGT 2 cut(s) 883, 1282
MaeI CTAG 3 cut(s) 87, 333, 1233
MaeIII GTNAC 1 cut(s) 904
MalI GATC 5 cut(s) 165, 170, 402, 1187, 1196
MboI GATC 5 cut(s) 163, 168, 400, 1185, 1194
MboII GAAGA 7 cut(s) 283, 620, 679, 780, 1088, 1123, 1237
MflI RGATCY 1 cut(s) 1185
MhlI GDGCHC 3 cut(s) 291, 472, 1392
MlsI TGGCCA 2 cut(s) 116, 239
MluCI AATT 6 cut(s) 38, 180, 683, 689, 898, 923
MluNI TGGCCA 2 cut(s) 116, 239
MlyI GAGTC 1 cut(s) 514
MmeI TCCRAC 1 cut(s) 1065
Mox20I TGGCCA 2 cut(s) 116, 239
MscI TGGCCA 2 cut(s) 116, 239
MseI TTAA 1 cut(s) 1101
MslI CAYNNNNRTG 3 cut(s) 110, 122, 210
Msp20I TGGCCA 2 cut(s) 116, 239
MspI CCGG 1 cut(s) 410
MspR9I CCNGG 3 cut(s) 885, 1284, 1415
MvaI CCWGG 3 cut(s) 885, 1284, 1415
MwoI GCNNNNNNNGC 7 cut(s) 28, 533, 1318, 1327, 1339, 1363, 1366
NdeI CATATG 1 cut(s) 529
NdeII GATC 5 cut(s) 163, 168, 400, 1185, 1194
NlaIII CATG 5 cut(s) 86, 109, 268, 641, 1267
NlaIV GGNNCC 5 cut(s) 64, 92, 571, 797, 1144
NmeAIII GCCGAG 1 cut(s) 953
NmuCI GTSAC 1 cut(s) 904
PagI TCATGA 2 cut(s) 637, 1263
PciSI GCTCTTC 1 cut(s) 296
PfeI GAWTC 1 cut(s) 479
PflFI GACNNNGTC 1 cut(s) 1284
PkrI GCNGC 5 cut(s) 30, 1329, 1332, 1359, 1368
PleI GAGTC 1 cut(s) 514
PpsI GAGTC 1 cut(s) 514
Psp124BI GAGCTC 1 cut(s) 291
Psp6I CCWGG 3 cut(s) 883, 1282, 1413
PspGI CCWGG 3 cut(s) 883, 1282, 1413
PspN4I GGNNCC 5 cut(s) 64, 92, 571, 797, 1144
PspPI GGNCC 3 cut(s) 811, 881, 1143
PsuI RGATCY 1 cut(s) 1185
PsyI GACNNNGTC 1 cut(s) 1284
RsaI GTAC 2 cut(s) 717, 837
RsaNI GTAC 2 cut(s) 716, 836
RseI CAYNNNNRTG 3 cut(s) 110, 122, 210
SacI GAGCTC 1 cut(s) 291
SapI GCTCTTC 1 cut(s) 296
SaqAI TTAA 1 cut(s) 1101
SatI GCNGC 5 cut(s) 29, 1328, 1331, 1358, 1367
Sau3AI GATC 5 cut(s) 163, 168, 400, 1185, 1194
Sau96I GGNCC 3 cut(s) 811, 881, 1143
SchI GAGTC 1 cut(s) 514
ScrFI CCNGG 3 cut(s) 885, 1284, 1415
SduI GDGCHC 3 cut(s) 291, 472, 1392
SexAI ACCWGGT 2 cut(s) 883, 1282
SfaNI GCATC 6 cut(s) 15, 180, 319, 631, 853, 859
SinI GGWCC 3 cut(s) 811, 881, 1143
SmiMI CAYNNNNRTG 3 cut(s) 110, 122, 210
SmlI CTYRAG 1 cut(s) 1289
SmoI CTYRAG 1 cut(s) 1289
Sse9I AATT 6 cut(s) 38, 180, 683, 689, 898, 923
SsiI CCGC 2 cut(s) 1030, 1328
SspMI CTAG 3 cut(s) 87, 333, 1233
SstI GAGCTC 1 cut(s) 291
StyD4I CCNGG 3 cut(s) 883, 1282, 1413
StyI CCWWGG 3 cut(s) 58, 72, 472
TaaI ACNGT 2 cut(s) 380, 999
TaqI TCGA 1 cut(s) 741
TasI AATT 6 cut(s) 38, 180, 683, 689, 898, 923
TauI GCSGC 1 cut(s) 1330
TfiI GAWTC 1 cut(s) 479
Tru1I TTAA 1 cut(s) 1101
Tru9I TTAA 1 cut(s) 1101
TscAI CASTG 2 cut(s) 364, 846
TseFI GTSAC 1 cut(s) 904
TseI GCWGC 4 cut(s) 28, 1330, 1357, 1366
Tsp45I GTSAC 1 cut(s) 904
TspDTI ATGAA 4 cut(s) 51, 494, 626, 1280
TspGWI ACGGA 2 cut(s) 788, 1163
TspRI CASTG 2 cut(s) 364, 846
Tth111I GACNNNGTC 1 cut(s) 1284
VpaK11BI GGWCC 3 cut(s) 811, 881, 1143
XapI RAATTY 3 cut(s) 180, 683, 689
XmiI GTMKAC 2 cut(s) 78, 390
XspI CTAG 3 cut(s) 87, 333, 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.