Rorug03G0047100

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
3613198 .. 3617023
3826 bp
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UTR
Exon/CDS
Intron
Rorug03G0047100.1

Sequence Viewer

Length: 537 bp
ATGGGTATTGACCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTGTTCTTCTTCCTCTCCTCCTCTTTCTTCTTTTTTATTCTTACAGAAAGAAGAAATTTGAAAGAAGCTCCAAGAAGGAAGAAAGTTACGATCTCCCAGCCAGAGATAAACCAAAGATTTCAGGACGACATAATCTCTGCTAATCAACCAGTTAATCAGCTAAAAGAGCCGGCAATGCTAACTAGCGAGGAGAAAATGCGTACCATCTTTATGACTTTTGATGTTAATCAATATGCCATGAAGCACAATCAAGTGCTGAACTTCTTCACCGGGGAACTTGCAGTCAATCGTGAAGATATGCAATTGATATATCTGTACCCAAAGAAAAAACCTCTCCATGGCTTCATCAAGTTAAGCAGTCCTCTGTTGGTGTGTCGTGTCTTGGGGTACAAGCACGGACAAAAGGAATGTATCATCAAATCGAACGGGAAGTCCATTTACTTGAAGCCATGGACAGACGATTATCTGGAGAGGTTCGGGCAGTAA

Protein Analysis

178

Amino Acids

21.3

Weight (kDa)

9.44

Isoelectric Point (pI)

34.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 106
AfaI GTAC 3 cut(s) 253, 368, 440
AfiI CCNNNNNNNGG 1 cut(s) 389
AgsI TTSAA 2 cut(s) 112, 496
AloI GAACNNNNNNTCC 2 cut(s) 467, 499
AluBI AGCT 2 cut(s) 119, 211
AluI AGCT 2 cut(s) 119, 211
ApoI RAATTY 1 cut(s) 106
ArsI GACNNNNNNTTYG 2 cut(s) 467, 499
Asp700I GAANNNNTTC 1 cut(s) 314
AsuC2I CCSGG 1 cut(s) 322
AsuHPI GGTGA 1 cut(s) 310
BarI GAAGNNNNNNTAC 2 cut(s) 473, 505
BccI CCATC 1 cut(s) 263
BcnI CCSGG 1 cut(s) 322
BfaI CTAG 1 cut(s) 234
Bme1390I CCNGG 1 cut(s) 322
BmrFI CCNGG 1 cut(s) 322
BpuMI CCSGG 1 cut(s) 322
BsaBI GATNNNNATC 1 cut(s) 276
BsaJI CCNNGG 3 cut(s) 321, 388, 500
Bsc4I CCNNNNNNNGG 1 cut(s) 389
Bse118I RCCGGY 1 cut(s) 220
Bse1I ACTGG 1 cut(s) 200
Bse3DI GCAATG 1 cut(s) 231
Bse8I GATNNNNATC 1 cut(s) 276
BseDI CCNNGG 3 cut(s) 321, 388, 500
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 1 cut(s) 389
BseMI GCAATG 1 cut(s) 231
BseNI ACTGG 1 cut(s) 200
BseRI GAGGAG 3 cut(s) 58, 61, 254
BseYI CCCAGC 1 cut(s) 147
BsiSI CCGG 2 cut(s) 221, 321
BslI CCNNNNNNNGG 1 cut(s) 389
Bsp143I GATC 1 cut(s) 141
Bsp19I CCATGG 2 cut(s) 388, 500
BsrDI GCAATG 1 cut(s) 231
BsrFI RCCGGY 1 cut(s) 220
BsrI ACTGG 1 cut(s) 200
BssAI RCCGGY 1 cut(s) 220
BssECI CCNNGG 3 cut(s) 321, 388, 500
BssMI GATC 1 cut(s) 141
BssT1I CCWWGG 2 cut(s) 388, 500
BstC8I GCNNGC 1 cut(s) 222
BstDSI CCRYGG 2 cut(s) 388, 500
BstKTI GATC 1 cut(s) 144
BstMBI GATC 1 cut(s) 141
BstMWI GCNNNNNNNGC 2 cut(s) 217, 226
BstSCI CCNGG 1 cut(s) 320
BtgI CCRYGG 2 cut(s) 388, 500
Cac8I GCNNGC 1 cut(s) 222
Cfr10I RCCGGY 1 cut(s) 220
Csp6I GTAC 3 cut(s) 252, 367, 439
CviAII CATG 3 cut(s) 289, 389, 501
CviJI RGCY 6 cut(s) 119, 151, 211, 220, 393, 499
CviKI_1 RGCY 6 cut(s) 119, 151, 211, 220, 393, 499
CviQI GTAC 3 cut(s) 252, 367, 439
DpnI GATC 1 cut(s) 143
DpnII GATC 1 cut(s) 141
Eco130I CCWWGG 2 cut(s) 388, 500
EcoT14I CCWWGG 2 cut(s) 388, 500
ErhI CCWWGG 2 cut(s) 388, 500
FaeI CATG 3 cut(s) 292, 392, 504
FaiI YATR 8 cut(s) 182, 263, 285, 290, 350, 361, 390, 502
FatI CATG 3 cut(s) 288, 388, 500
FspBI CTAG 1 cut(s) 234
GsaI CCCAGC 1 cut(s) 151
HapII CCGG 2 cut(s) 221, 321
Hin1II CATG 3 cut(s) 292, 392, 504
HpaII CCGG 2 cut(s) 221, 321
HphI GGTGA 1 cut(s) 310
Hpy188III TCNNGA 3 cut(s) 173, 341, 518
HpyAV CCTTC 2 cut(s) 25, 120
HpyCH4V TGCA 2 cut(s) 332, 352
HpyF10VI GCNNNNNNNGC 2 cut(s) 217, 226
Hsp92II CATG 3 cut(s) 292, 392, 504
KroI GCCGGC 1 cut(s) 220
KroNI GCCGGC 1 cut(s) 222
Kzo9I GATC 1 cut(s) 141
LmnI GCTCC 1 cut(s) 124
LpnPI CCDG 7 cut(s) 158, 161, 165, 213, 234, 334, 503
MaeI CTAG 1 cut(s) 234
MaeIII GTNAC 1 cut(s) 136
MalI GATC 1 cut(s) 143
MboI GATC 1 cut(s) 141
MfeI CAATTG 1 cut(s) 353
MluCI AATT 2 cut(s) 106, 353
MnlI CCTC 7 cut(s) 74, 79, 82, 232, 393, 423, 516
MroNI GCCGGC 1 cut(s) 220
MroXI GAANNNNTTC 1 cut(s) 314
MseI TTAA 3 cut(s) 204, 276, 404
MslI CAYNNNNRTG 1 cut(s) 260
MspI CCGG 2 cut(s) 221, 321
MspR9I CCNGG 1 cut(s) 322
MunI CAATTG 1 cut(s) 353
MwoI GCNNNNNNNGC 2 cut(s) 217, 226
NaeI GCCGGC 1 cut(s) 222
NciI CCSGG 1 cut(s) 322
NcoI CCATGG 2 cut(s) 388, 500
NdeII GATC 1 cut(s) 141
NgoMIV GCCGGC 1 cut(s) 220
NlaIII CATG 3 cut(s) 292, 392, 504
PdiI GCCGGC 1 cut(s) 222
PdmI GAANNNNTTC 1 cut(s) 314
PspFI CCCAGC 1 cut(s) 147
RsaI GTAC 3 cut(s) 253, 368, 440
RsaNI GTAC 3 cut(s) 252, 367, 439
RseI CAYNNNNRTG 1 cut(s) 260
SaqAI TTAA 3 cut(s) 204, 276, 404
Sau3AI GATC 1 cut(s) 141
ScrFI CCNGG 1 cut(s) 322
SetI ASST 4 cut(s) 121, 213, 385, 527
SmiMI CAYNNNNRTG 1 cut(s) 260
Sse9I AATT 2 cut(s) 106, 353
SspMI CTAG 1 cut(s) 234
StyD4I CCNGG 1 cut(s) 320
StyI CCWWGG 2 cut(s) 388, 500
TaqI TCGA 1 cut(s) 473
TasI AATT 2 cut(s) 106, 353
Tru1I TTAA 3 cut(s) 204, 276, 404
Tru9I TTAA 3 cut(s) 204, 276, 404
TspDTI ATGAA 2 cut(s) 305, 385
TspGWI ACGGA 1 cut(s) 462
XapI RAATTY 1 cut(s) 106
XmnI GAANNNNTTC 1 cut(s) 314
XspI CTAG 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.