AT5G64870

Flotillin-like protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
25929432 .. 25931384
1953 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G64870.1

Sequence Viewer

Length: 1440 bp
ATGAGTTACAGAGTCGCTAAAGCATCGCAGTATCTTGCGATCACCGGTGGTGGGATCACAGACATCAAGCTTGCAAAGAAGTCTTGGGTGTTTCCATGGCAGTCTTGCACCGTCTTCGACGTTTCTCCGGTGAACTACACGTTCGAGGTTCAAGCTATGAGTTCCGAGAAACTTCCCTTTGTTATTCCTGCTGTTTTCACAATCGGTCCTCGCGTTGATGATCCTCACGCTCTCTTGTTGTATGCCATGCTTATGTCTCAACACGATAAGCACTCGAATCACGTCAATGAGCTTGTTCAGGGTGTTATCGAAGGAGAGACTCGTGTTCTTGTTGCTTCCATGACTATGGAAGAGGTCTTCAAAGGAACAAAGGAGTTTAAGAAGGAAGTGTTTGACAAGGTTCAGCTAGAGCTAAACCAGTTTGGTCTTGTGATCTACAACGCCAATGTGAAGCAGCTTGTTGATGTGCCTGGACATGAGTACTTCTCTTACTTGGGCCAGAAGACTCAGATGGAAGCAGCAAACCAAGCCAAGATCGATGTAGCAGAGGCAAAGATGAAGGGAGAGGTTGGTGCCAAAGAAAGGACTGGACTCACAATCCAGAATGCAGCCAAGATTGACGCTGAGTCAAAGATCATCTCTACTCAAAGGCTAGGAGAAGGGACAAAAGAGGAGATCAAGGTGAAGACTGAAGTCAAAGTGTTTCAGAATGAGAAAGAGGCTCTTGTTGCTAAGGCTGATGCAGCACTTGCGATTCAAAAGGCTGCTTTGTCCCAAAACTCTCGTGTGGCTGAGGTTGAAGCAGCCAAGGCTGTTGCTTTGAGGGAAGCTGAGCTTCAGACTAAAGTAGAGAAGATGAATGCATTGACTCGGACAGAGAAGCTTAAAGCTGAGTTCCTCAGTAAAGCCAGTGTTGAGTATGAAACTAAGGTGCAAGAAGCGAACTGGGAGTTGTACAATAAGCAAAAGCAAGCAGAAGCTGTTCTTTACGAGAAGCAGAAGCAAGCGGAAGCGACGAAAGCTGCAGCTGATGCTGCCTTCTATTCAAAACAGAAAGATGCAGAGGGACTTGTCGCAATGGCCGATGCTCAGGGGACTTACCTCAAGACCCTCTTAGGCGCAGTTAACAATGATTACTCAGCCATGAGAGACTTCTTGATGATCAACAATGGCATTTATCAGGATATTGCCAAGACCAATGCTGTTGCGATCAGGGACCTGCAGCCTAAGATCAGCGTGTGGAACCATGGTGGTGCTGAGCAGGGGATGAACGGTGGTGGTAAAGCTACGATGAACGATATTGCTGGACTCTACAAGATGTTACCACCGGTTCTTGATACGGTTTATGAGCAGACAGGGATGCAGCCACCAGCTTGGATTGGTACATTGCGTGGTGCTGAGCCCAAACAATCACTTCATGCTCAACAACACAGAGGTTGA

Protein Analysis

479

Amino Acids

52.83

Weight (kDa)

6.75

Isoelectric Point (pI)

28.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Band_7 PF01145 12 - 185 4.7e-25 SPFH domain / Band 7 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1227
AccB1I GGYRCC 1 cut(s) 572
AccII CGCG 1 cut(s) 213
AciI CCGC 1 cut(s) 1007
AclWI GGATC 2 cut(s) 62, 215
AcoI YGGCCR 1 cut(s) 1080
AcuI CTGAAG 2 cut(s) 711, 821
AfaI GTAC 3 cut(s) 482, 956, 1384
AfiI CCNNNNNNNGG 2 cut(s) 51, 582
AflIII ACRYGT 1 cut(s) 138
AgeI ACCGGT 2 cut(s) 44, 1327
AgsI TTSAA 5 cut(s) 152, 361, 758, 800, 1047
AhdI GACNNNNNGTC 1 cut(s) 625
AjiI CACGTC 1 cut(s) 283
AjnI CCWGG 1 cut(s) 469
Alw26I GTCTC 3 cut(s) 261, 311, 1143
AlwI GGATC 2 cut(s) 62, 215
AlwNI CAGNNNCTG 1 cut(s) 980
AoxI GGCC 2 cut(s) 496, 1080
AsiGI ACCGGT 2 cut(s) 44, 1327
Asp700I GAANNNNTTC 1 cut(s) 981
AspLEI GCGC 1 cut(s) 1121
AspS9I GGNCC 3 cut(s) 206, 496, 1216
AsuHPI GGTGA 3 cut(s) 34, 142, 694
AvaII GGWCC 2 cut(s) 206, 1216
BanI GGYRCC 1 cut(s) 572
BanII GRGCYC 1 cut(s) 1404
BauI CACGAG 2 cut(s) 321, 783
BbsI GAAGAC 4 cut(s) 106, 349, 509, 692
BbvCI CCTCAGC 1 cut(s) 792
BccI CCATC 1 cut(s) 505
BcgI CGANNNNNNTGC 2 cut(s) 97, 131
BciT130I CCWGG 1 cut(s) 471
BclI TGATCA 1 cut(s) 1161
BcoDI GTCTC 3 cut(s) 261, 311, 1143
BfaI CTAG 2 cut(s) 407, 653
BfmI CTRYAG 2 cut(s) 1023, 1220
BfuAI ACCTGC 1 cut(s) 1227
BlpI GCTNAGC 3 cut(s) 831, 1257, 1398
BmcAI AGTACT 1 cut(s) 482
Bme1390I CCNGG 1 cut(s) 471
Bme18I GGWCC 2 cut(s) 206, 1216
BmeRI GACNNNNNGTC 1 cut(s) 625
BmgBI CACGTC 1 cut(s) 283
BmgT120I GGNCC 3 cut(s) 206, 496, 1216
BmiI GGNNCC 3 cut(s) 574, 1217, 1244
BmrFI CCNGG 1 cut(s) 471
BmrI ACTGGG 1 cut(s) 955
BmsI GCATC 6 cut(s) 32, 730, 1021, 1048, 1075, 1350
BmuI ACTGGG 1 cut(s) 955
BoxI GACNNNNGTC 1 cut(s) 692
BpiI GAAGAC 4 cut(s) 106, 349, 509, 692
BplI GAGNNNNNCTC 2 cut(s) 470, 502
Bpu10I CCTNAGC 3 cut(s) 732, 792, 1089
Bpu1102I GCTNAGC 3 cut(s) 831, 1257, 1398
BpuEI CTTGAG 1 cut(s) 1088
Bsa29I ATCGAT 1 cut(s) 537
BsaJI CCNNGG 3 cut(s) 95, 807, 1246
BsaWI WCCGGW 3 cut(s) 44, 127, 1327
Bsc4I CCNNNNNNNGG 2 cut(s) 51, 582
Bse118I RCCGGY 2 cut(s) 44, 1327
Bse1I ACTGG 4 cut(s) 418, 592, 909, 950
Bse3DI GCAATG 2 cut(s) 1083, 1385
BseBI CCWGG 1 cut(s) 471
BseCI ATCGAT 1 cut(s) 537
BseDI CCNNGG 3 cut(s) 95, 807, 1246
BseGI GGATG 2 cut(s) 1272, 1365
BseLI CCNNNNNNNGG 2 cut(s) 51, 582
BseMI GCAATG 2 cut(s) 1083, 1385
BseNI ACTGG 4 cut(s) 418, 592, 909, 950
BseRI GAGGAG 1 cut(s) 686
Bsh1236I CGCG 1 cut(s) 213
BshFI GGCC 2 cut(s) 498, 1082
BshNI GGYRCC 1 cut(s) 572
BshTI ACCGGT 2 cut(s) 44, 1327
BshVI ATCGAT 1 cut(s) 537
BsiSI CCGG 3 cut(s) 45, 128, 1328
BslFI GGGAC 5 cut(s) 676, 757, 1080, 1108, 1229
BslI CCNNNNNNNGG 2 cut(s) 51, 582
BsmAI GTCTC 3 cut(s) 261, 311, 1143
BsmFI GGGAC 5 cut(s) 676, 757, 1080, 1108, 1229
BsmI GAATGC 2 cut(s) 610, 865
BsnI GGCC 2 cut(s) 498, 1082
Bsp1286I GDGCHC 1 cut(s) 1404
Bsp1407I TGTACA 1 cut(s) 954
Bsp1720I GCTNAGC 3 cut(s) 831, 1257, 1398
Bsp19I CCATGG 2 cut(s) 95, 1246
BspACI CCGC 1 cut(s) 1007
BspANI GGCC 2 cut(s) 498, 1082
BspDI ATCGAT 1 cut(s) 537
BspFNI CGCG 1 cut(s) 213
BspLI GGNNCC 3 cut(s) 574, 1217, 1244
BspMAI CTGCAG 2 cut(s) 1027, 1224
BspMI ACCTGC 1 cut(s) 1227
BspPI GGATC 2 cut(s) 62, 215
BspT107I GGYRCC 1 cut(s) 572
BsrDI GCAATG 2 cut(s) 1083, 1385
BsrFI RCCGGY 2 cut(s) 44, 1327
BsrGI TGTACA 1 cut(s) 954
BsrI ACTGG 4 cut(s) 418, 592, 909, 950
BssAI RCCGGY 2 cut(s) 44, 1327
BssECI CCNNGG 3 cut(s) 95, 807, 1246
BssSI CACGAG 2 cut(s) 321, 783
BssT1I CCWWGG 3 cut(s) 95, 807, 1246
Bst2BI CACGAG 2 cut(s) 321, 783
Bst2UI CCWGG 1 cut(s) 471
Bst4CI ACNGT 3 cut(s) 112, 1274, 1342
Bst6I CTCTTC 1 cut(s) 345
BstAPI GCANNNNNTGC 2 cut(s) 749, 1031
BstAUI TGTACA 1 cut(s) 954
BstC8I GCNNGC 3 cut(s) 72, 972, 1005
BstDSI CCRYGG 2 cut(s) 95, 1246
BstF5I GGATG 2 cut(s) 1272, 1365
BstFNI CGCG 1 cut(s) 213
BstHHI GCGC 1 cut(s) 1121
BstMAI GTCTC 3 cut(s) 261, 311, 1143
BstMWI GCNNNNNNNGC 8 cut(s) 527, 728, 743, 749, 809, 1019, 1031, 1034
BstNI CCWGG 1 cut(s) 471
BstPAI GACNNNNGTC 1 cut(s) 692
BstSCI CCNGG 1 cut(s) 469
BstSFI CTRYAG 2 cut(s) 1023, 1220
BstUI CGCG 1 cut(s) 213
BstV2I GAAGAC 4 cut(s) 106, 349, 509, 692
BstXI CCANNNNNNTGG 2 cut(s) 346, 1374
Bsu15I ATCGAT 1 cut(s) 537
BsuRI GGCC 2 cut(s) 498, 1082
BsuTUI ATCGAT 1 cut(s) 537
BtgI CCRYGG 2 cut(s) 95, 1246
BtgZI GCGATG 1 cut(s) 9
BtrI CACGTC 1 cut(s) 283
BtsCI GGATG 2 cut(s) 1272, 1365
BtsIMutI CAGTG 1 cut(s) 916
BveI ACCTGC 1 cut(s) 1227
Cac8I GCNNGC 3 cut(s) 72, 972, 1005
CaiI CAGNNNCTG 1 cut(s) 980
CfoI GCGC 1 cut(s) 1121
Cfr10I RCCGGY 2 cut(s) 44, 1327
Cfr13I GGNCC 3 cut(s) 206, 496, 1216
ClaI ATCGAT 1 cut(s) 537
CseI GACGC 1 cut(s) 629
Csp6I GTAC 3 cut(s) 481, 955, 1383
CspAI ACCGGT 2 cut(s) 44, 1327
CviAII CATG 7 cut(s) 96, 247, 340, 476, 1144, 1247, 1418
CviQI GTAC 3 cut(s) 481, 955, 1383
DriI GACNNNNNGTC 1 cut(s) 625
EaeI YGGCCR 1 cut(s) 1080
Eam1104I CTCTTC 1 cut(s) 345
Eam1105I GACNNNNNGTC 1 cut(s) 625
EarI CTCTTC 1 cut(s) 345
Eco130I CCWWGG 3 cut(s) 95, 807, 1246
Eco24I GRGCYC 1 cut(s) 1404
Eco47I GGWCC 2 cut(s) 206, 1216
Eco57I CTGAAG 2 cut(s) 711, 821
EcoO109I RGGNCCY 1 cut(s) 1216
EcoRII CCWGG 1 cut(s) 469
EcoT14I CCWWGG 3 cut(s) 95, 807, 1246
EcoT22I ATGCAT 1 cut(s) 865
EcoT38I GRGCYC 1 cut(s) 1404
ErhI CCWWGG 3 cut(s) 95, 807, 1246
FaeI CATG 7 cut(s) 99, 250, 343, 479, 1147, 1250, 1421
FalI AAGNNNNNCTT 8 cut(s) 708, 740, 819, 851, 969, 1001, 1097, 1129
FaqI GGGAC 5 cut(s) 676, 757, 1080, 1108, 1229
FatI CATG 7 cut(s) 95, 246, 339, 475, 1143, 1246, 1417
FbaI TGATCA 1 cut(s) 1161
FokI GGATG 2 cut(s) 1279, 1372
FriOI GRGCYC 1 cut(s) 1404
FspBI CTAG 2 cut(s) 407, 653
GlaI GCGC 1 cut(s) 1120
HaeIII GGCC 2 cut(s) 498, 1082
HapII CCGG 3 cut(s) 45, 128, 1328
HgaI GACGC 1 cut(s) 629
HhaI GCGC 1 cut(s) 1121
Hin1II CATG 7 cut(s) 99, 250, 343, 479, 1147, 1250, 1421
Hin6I GCGC 1 cut(s) 1119
HinP1I GCGC 1 cut(s) 1119
HincII GTYRAC 1 cut(s) 1126
HindII GTYRAC 1 cut(s) 1126
HindIII AAGCTT 2 cut(s) 68, 881
HinfI GANTC 9 cut(s) 12, 277, 319, 505, 591, 626, 754, 868, 1308
HpaI GTTAAC 1 cut(s) 1126
HpaII CCGG 3 cut(s) 45, 128, 1328
HphI GGTGA 3 cut(s) 34, 142, 694
Hpy166II GTNNAC 2 cut(s) 133, 1126
Hpy188I TCNGA 5 cut(s) 166, 510, 708, 840, 873
Hpy188III TCNNGA 5 cut(s) 601, 1105, 1156, 1181, 1334
Hpy8I GTNNAC 2 cut(s) 133, 1126
Hpy99I CGWCG 2 cut(s) 122, 1018
HpyAV CCTTC 5 cut(s) 305, 376, 553, 653, 1048
HpyCH4III ACNGT 3 cut(s) 112, 1274, 1342
HpyCH4IV ACGT 3 cut(s) 120, 140, 282
HpyF10VI GCNNNNNNNGC 8 cut(s) 527, 728, 743, 749, 809, 1019, 1031, 1034
HpySE526I ACGT 3 cut(s) 120, 140, 282
Hsp92II CATG 7 cut(s) 99, 250, 343, 479, 1147, 1250, 1421
HspAI GCGC 1 cut(s) 1119
Ksp22I TGATCA 1 cut(s) 1161
KspAI GTTAAC 1 cut(s) 1126
LweI GCATC 6 cut(s) 32, 730, 1021, 1048, 1075, 1350
MaeI CTAG 2 cut(s) 407, 653
MaeII ACGT 3 cut(s) 120, 140, 282
MaeIII GTNAC 2 cut(s) 5, 1320
MboII GAAGA 6 cut(s) 106, 349, 362, 514, 697, 865
MhlI GDGCHC 1 cut(s) 1404
MlyI GAGTC 7 cut(s) 21, 313, 499, 585, 635, 862, 1302
Mph1103I ATGCAT 1 cut(s) 865
MroXI GAANNNNTTC 1 cut(s) 981
MseI TTAA 3 cut(s) 378, 885, 1125
MslI CAYNNNNRTG 4 cut(s) 251, 285, 344, 1251
MspA1I CMGCKG 1 cut(s) 1028
MspI CCGG 3 cut(s) 45, 128, 1328
MspR9I CCNGG 1 cut(s) 471
Mva1269I GAATGC 2 cut(s) 610, 865
MvaI CCWGG 1 cut(s) 471
MvnI CGCG 1 cut(s) 213
MwoI GCNNNNNNNGC 8 cut(s) 527, 728, 743, 749, 809, 1019, 1031, 1034
NcoI CCATGG 2 cut(s) 95, 1246
NlaIII CATG 7 cut(s) 99, 250, 343, 479, 1147, 1250, 1421
NlaIV GGNNCC 3 cut(s) 574, 1217, 1244
NsiI ATGCAT 1 cut(s) 865
PcsI WCGNNNNNNNCGW 2 cut(s) 210, 1080
PctI GAATGC 2 cut(s) 610, 865
PdmI GAANNNNTTC 1 cut(s) 981
PfeI GAWTC 2 cut(s) 277, 754
PinAI ACCGGT 2 cut(s) 44, 1327
PleI GAGTC 7 cut(s) 20, 313, 499, 585, 634, 862, 1302
PpsI GAGTC 7 cut(s) 20, 313, 499, 585, 634, 862, 1302
PpuMI RGGWCCY 1 cut(s) 1216
PshAI GACNNNNGTC 1 cut(s) 692
Psp5II RGGWCCY 1 cut(s) 1216
Psp6I CCWGG 1 cut(s) 469
PspGI CCWGG 1 cut(s) 469
PspN4I GGNNCC 3 cut(s) 574, 1217, 1244
PspPI GGNCC 3 cut(s) 206, 496, 1216
PspPPI RGGWCCY 1 cut(s) 1216
PstI CTGCAG 2 cut(s) 1027, 1224
PstNI CAGNNNCTG 1 cut(s) 980
PvuII CAGCTG 1 cut(s) 1028
RsaI GTAC 3 cut(s) 482, 956, 1384
RsaNI GTAC 3 cut(s) 481, 955, 1383
RseI CAYNNNNRTG 4 cut(s) 251, 285, 344, 1251
SaqAI TTAA 3 cut(s) 378, 885, 1125
Sau96I GGNCC 3 cut(s) 206, 496, 1216
ScaI AGTACT 1 cut(s) 482
SchI GAGTC 7 cut(s) 21, 313, 499, 585, 635, 862, 1302
ScrFI CCNGG 1 cut(s) 471
SduI GDGCHC 1 cut(s) 1404
SfaNI GCATC 6 cut(s) 32, 730, 1021, 1048, 1075, 1350
SfcI CTRYAG 2 cut(s) 1023, 1220
SgrAI CRCCGGYG 1 cut(s) 44
SinI GGWCC 2 cut(s) 206, 1216
SmiMI CAYNNNNRTG 4 cut(s) 251, 285, 344, 1251
SmlI CTYRAG 1 cut(s) 1103
SmoI CTYRAG 1 cut(s) 1103
SsiI CCGC 1 cut(s) 1007
SspMI CTAG 2 cut(s) 407, 653
StyD4I CCNGG 1 cut(s) 469
StyI CCWWGG 3 cut(s) 95, 807, 1246
TaaI ACNGT 3 cut(s) 112, 1274, 1342
TaiI ACGT 3 cut(s) 123, 143, 285
TaqI TCGA 5 cut(s) 117, 144, 275, 309, 537
TaqII GACCGA 1 cut(s) 194
TatI WGTACW 2 cut(s) 480, 954
TfiI GAWTC 2 cut(s) 277, 754
Tru1I TTAA 3 cut(s) 378, 885, 1125
Tru9I TTAA 3 cut(s) 378, 885, 1125
TscAI CASTG 1 cut(s) 916
TspDTI ATGAA 6 cut(s) 572, 872, 936, 1283, 1307, 1406
TspRI CASTG 1 cut(s) 916
VpaK11BI GGWCC 2 cut(s) 206, 1216
XmnI GAANNNNTTC 1 cut(s) 981
XspI CTAG 2 cut(s) 407, 653
ZrmI AGTACT 1 cut(s) 482
Zsp2I ATGCAT 1 cut(s) 865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.