Rh6CG394900

Flotillin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000793
Physical Location & Seq
Forward (+)
58254089 .. 58255868
1780 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG394900.1

Sequence Viewer

Length: 1428 bp
ATGTATAAAGTAGCAAGCGCTTCCGAGTATCTGGTGATCACAGGGGCCGGAATCCCCGACCTGAAGATCGCAAAGAAGGCATGGGTACTCCCTGGCCAGTCCTACGCGGTCATTGACCTCTCTCCGGTGAACTACACATTCGAAGTCCAGGCAATGAGCGCCGAGAAGCTCCCATTTGTTCTCCCTGCCGTCTTTACCATCGGCCCCCGAGCCGACGACAGGGAGGCCATTGAGAAATACGCCAGGCTCCTCGCCAGCTGCGACAAGAACTCGAAACACGTCGAGGAGCTTGTCCAGGGCATCATCGAGGGTGAGACTCGCGTCCTTGTGGCGTCGATGACCATGGAGGAGGTGTTCAAGGGGACCAAAGAGTTCAAGGAGGAGGTTTTCGACAAGGTTCAGATCGAGCTCAATCAGTTCGGGCTTTTTATCTACAATGCAAATGTTAAGCAGTTGGTGGACGTCCCTGGACACGAGTATTTCAGTTACTTGGGGCAGAAGACTCAGATGGAGGCTGCCAACCAGGCCAAGGTCGACGTGGCCGAGGCGAAAATGAAAGGTGCTGTTGGCTCCAAGCTGAGGGAGGGGCAGACATTGCAAAACGCTGCCAAGATTGATGCCGAGACTAAGATCATAGCGACTCAGAGGGAAGGGGAGGGGAAGAAGGAGGAGGTTAAGGTGAAGGCGGAGGTCAAGGTTTACGAGAACCAAAGAGAAGCTGAGGTGGCTAAAGCAAATGCTGAGCTGGCAATGAAGAAGGCAGGGTGGACTAAGGAGGCGCAGGTGGCCGAGGTTGAGGCGCAGAAGGCGGTGGCGATGAAGGAGGCCCAGTTGCAAAAGGAGGTGGAGAGGATGAATGCACTGACTATGACAGAAAAGCTCAAGGCCGAGTTTTTGAGTAAGGCAAGTGTTGAGGCCGAAACTAAAGCTCAAGAGGCAAACTGGAAGCTCTACCAAGAACAAAAAGTGGCGGATGCGATTCTTTACCAGAGGGGGAAAGAGGCAGAGGCAATGAGAGCAGCTGCCGAGGCTCAGTTCTTTGCTAAGCAGAAGGCTGCTGATGGAGAGTTTTATGCTAAGAAGAAAGAGGCCGAGGGACTTGTGGAACTTGGAAAAGCGCAAGGTGTTTATCTAAGCACTCTTATGGACTCGTTGGGTGGCAACTATGGGGCAATGAGGGACTTCTTGATGATCAATGGTGGGATGTTTCAAGAGATTGCTAGGATCAATGCCGGGGCGGTGCGTGGGCTTCAGCCTAAGATTAGTATATGGACTAATGGCGGAGAGGCTTCCGGTGGCGGCGGCAATGCGGCTATGAAGGAGGCCGCCGGAGTTTATAAAATGTTGCCACCGTTGTTCAAGACGGTGCAGGAACAGACGGGAATGCTGCCGCCAAATTGGATGGGCACTTTGCCTGCTGATAATTGA

Protein Analysis

475

Amino Acids

52.09

Weight (kDa)

5.74

Isoelectric Point (pI)

24.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Band_7 PF01145 8 - 184 7.9e-21 SPFH domain / Band 7 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1338
AarI CACCTGC 1 cut(s) 772
AatII GACGTC 1 cut(s) 465
Acc36I ACCTGC 1 cut(s) 772
AccI GTMKAC 1 cut(s) 534
AccII CGCG 2 cut(s) 107, 321
AclWI GGATC 1 cut(s) 1232
AcoI YGGCCR 3 cut(s) 94, 540, 786
AcuI CTGAAG 2 cut(s) 83, 1235
AcyI GRCGYC 2 cut(s) 332, 462
AfaI GTAC 1 cut(s) 87
AfeI AGCGCT 1 cut(s) 19
AfiI CCNNNNNNNGG 4 cut(s) 124, 219, 529, 579
AflIII ACRYGT 1 cut(s) 277
AgsI TTSAA 4 cut(s) 358, 376, 1211, 1360
AjiI CACGTC 2 cut(s) 280, 538
AjnI CCWGG 6 cut(s) 91, 147, 242, 294, 466, 522
AloI GAACNNNNNNTCC 2 cut(s) 338, 370
Alw21I GWGCWC 1 cut(s) 411
Alw26I GTCTC 2 cut(s) 308, 617
AlwI GGATC 1 cut(s) 1232
Ama87I CYCGRG 1 cut(s) 207
Aor51HI AGCGCT 1 cut(s) 19
ApeKI GCWGC 7 cut(s) 258, 515, 605, 1019, 1022, 1055, 1387
AspLEI GCGC 5 cut(s) 20, 161, 781, 802, 1120
AspS9I GGNCC 4 cut(s) 45, 203, 363, 826
AsuC2I CCSGG 1 cut(s) 1234
AsuHPI GGTGA 4 cut(s) 46, 139, 323, 691
AsuII TTCGAA 1 cut(s) 141
AvaI CYCGRG 1 cut(s) 207
AvaII GGWCC 1 cut(s) 363
BaeGI GKGCMC 1 cut(s) 1409
BalI TGGCCA 1 cut(s) 96
BanII GRGCYC 1 cut(s) 411
BauI CACGAG 1 cut(s) 473
BbsI GAAGAC 1 cut(s) 506
Bbv12I GWGCWC 1 cut(s) 411
BbvCI CCTCAGC 2 cut(s) 578, 720
BbvI GCAGC 7 cut(s) 245, 502, 592, 1009, 1031, 1042, 1374
BccI CCATC 4 cut(s) 206, 502, 1055, 1396
BceAI ACGGC 1 cut(s) 173
BciT130I CCWGG 6 cut(s) 93, 149, 244, 296, 468, 524
BclI TGATCA 2 cut(s) 36, 1191
BcnI CCSGG 1 cut(s) 1234
BcoDI GTCTC 2 cut(s) 308, 617
BfaI CTAG 1 cut(s) 1221
BfoI RGCGCY 2 cut(s) 21, 162
BfuAI ACCTGC 1 cut(s) 772
BglI GCCNNNNNGGC 1 cut(s) 524
BlpI GCTNAGC 2 cut(s) 741, 1044
Bme1390I CCNGG 7 cut(s) 93, 149, 244, 296, 468, 524, 1234
Bme18I GGWCC 1 cut(s) 363
BmeT110I CYCGRG 1 cut(s) 207
BmgBI CACGTC 2 cut(s) 280, 538
BmgT120I GGNCC 4 cut(s) 45, 203, 363, 826
BmiI GGNNCC 5 cut(s) 46, 205, 248, 364, 571
BmrFI CCNGG 7 cut(s) 93, 149, 244, 296, 468, 524, 1234
BmrI ACTGGG 1 cut(s) 823
BmsI GCATC 3 cut(s) 309, 607, 964
BmuI ACTGGG 1 cut(s) 823
BoxI GACNNNNGTC 1 cut(s) 320
BpiI GAAGAC 1 cut(s) 506
Bpu10I CCTNAGC 2 cut(s) 578, 720
Bpu1102I GCTNAGC 2 cut(s) 741, 1044
Bpu14I TTCGAA 1 cut(s) 141
BpuEI CTTGAG 2 cut(s) 866, 915
BpuMI CCSGG 1 cut(s) 1234
BsaHI GRCGYC 2 cut(s) 332, 462
BsaWI WCCGGW 2 cut(s) 124, 1292
BsaXI ACNNNNNCTCC 4 cut(s) 338, 368, 815, 845
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 219, 529, 579
Bse1I ACTGG 3 cut(s) 97, 829, 947
Bse3DI GCAATG 6 cut(s) 159, 593, 756, 1017, 1179, 1312
BseBI CCWGG 6 cut(s) 93, 149, 244, 296, 468, 524
BseGI GGATG 4 cut(s) 858, 979, 1209, 1407
BseLI CCNNNNNNNGG 4 cut(s) 124, 219, 529, 579
BseMI GCAATG 6 cut(s) 159, 593, 756, 1017, 1179, 1312
BseMII CTCAG 6 cut(s) 518, 569, 656, 711, 732, 1046
BseNI ACTGG 3 cut(s) 97, 829, 947
BseRI GAGGAG 5 cut(s) 239, 299, 362, 395, 683
BseSI GKGCMC 1 cut(s) 1409
BseXI GCAGC 7 cut(s) 245, 502, 592, 1009, 1031, 1042, 1374
BsgI GTGCAG 1 cut(s) 1388
Bsh1236I CGCG 2 cut(s) 107, 321
BsiHKAI GWGCWC 1 cut(s) 411
BsiHKCI CYCGRG 1 cut(s) 207
BsiSI CCGG 5 cut(s) 48, 125, 1233, 1293, 1329
BslFI GGGAC 4 cut(s) 376, 449, 1110, 1193
BslI CCNNNNNNNGG 4 cut(s) 124, 219, 529, 579
BsmAI GTCTC 2 cut(s) 308, 617
BsmFI GGGAC 4 cut(s) 376, 449, 1110, 1193
BsmI GAATGC 2 cut(s) 862, 1389
BsoBI CYCGRG 1 cut(s) 207
Bsp119I TTCGAA 1 cut(s) 141
Bsp1286I GDGCHC 2 cut(s) 411, 1409
Bsp143I GATC 6 cut(s) 36, 66, 402, 630, 1191, 1224
Bsp1720I GCTNAGC 2 cut(s) 741, 1044
Bsp19I CCATGG 1 cut(s) 342
BspCNI CTCAG 6 cut(s) 517, 570, 655, 712, 733, 1045
BspFNI CGCG 2 cut(s) 107, 321
BspLI GGNNCC 5 cut(s) 46, 205, 248, 364, 571
BspMI ACCTGC 1 cut(s) 772
BspPI GGATC 1 cut(s) 1232
BspT104I TTCGAA 1 cut(s) 141
BsrDI GCAATG 6 cut(s) 159, 593, 756, 1017, 1179, 1312
BsrI ACTGG 3 cut(s) 97, 829, 947
BssMI GATC 6 cut(s) 36, 66, 402, 630, 1191, 1224
BssNI GRCGYC 2 cut(s) 332, 462
BssSI CACGAG 1 cut(s) 473
BssT1I CCWWGG 2 cut(s) 342, 528
Bst2BI CACGAG 1 cut(s) 473
Bst2UI CCWGG 6 cut(s) 93, 149, 244, 296, 468, 524
Bst4CI ACNGT 2 cut(s) 1353, 1366
BstACI GRCGYC 2 cut(s) 332, 462
BstAPI GCANNNNNTGC 1 cut(s) 595
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 4 cut(s) 16, 256, 747, 1416
BstDSI CCRYGG 1 cut(s) 342
BstF5I GGATG 4 cut(s) 858, 979, 1209, 1407
BstFNI CGCG 2 cut(s) 107, 321
BstH2I RGCGCY 2 cut(s) 21, 162
BstHHI GCGC 5 cut(s) 20, 161, 781, 802, 1120
BstKTI GATC 6 cut(s) 39, 69, 405, 633, 1194, 1227
BstMAI GTCTC 2 cut(s) 308, 617
BstMBI GATC 6 cut(s) 36, 66, 402, 630, 1191, 1224
BstNI CCWGG 6 cut(s) 93, 149, 244, 296, 468, 524
BstPAI GACNNNNGTC 1 cut(s) 320
BstSCI CCNGG 7 cut(s) 91, 147, 242, 294, 466, 522, 1232
BstSLI GKGCMC 1 cut(s) 1409
BstUI CGCG 2 cut(s) 107, 321
BstV1I GCAGC 7 cut(s) 245, 502, 592, 1009, 1031, 1042, 1374
BstV2I GAAGAC 1 cut(s) 506
BtgI CCRYGG 1 cut(s) 342
BtgZI GCGATG 1 cut(s) 830
BtrI CACGTC 2 cut(s) 280, 538
BtsCI GGATG 4 cut(s) 858, 979, 1209, 1407
BtsIMutI CAGTG 1 cut(s) 860
BveI ACCTGC 1 cut(s) 772
Cac8I GCNNGC 4 cut(s) 16, 256, 747, 1416
CfoI GCGC 5 cut(s) 20, 161, 781, 802, 1120
Cfr13I GGNCC 4 cut(s) 45, 203, 363, 826
CseI GACGC 2 cut(s) 310, 321
Csp6I GTAC 1 cut(s) 86
CviAII CATG 2 cut(s) 81, 343
CviQI GTAC 1 cut(s) 86
DpnI GATC 6 cut(s) 38, 68, 404, 632, 1193, 1226
DpnII GATC 6 cut(s) 36, 66, 402, 630, 1191, 1224
EaeI YGGCCR 3 cut(s) 94, 540, 786
EciI GGCGGA 3 cut(s) 701, 986, 1296
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 2 cut(s) 342, 528
Eco24I GRGCYC 1 cut(s) 411
Eco47I GGWCC 1 cut(s) 363
Eco47III AGCGCT 1 cut(s) 19
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 2 cut(s) 83, 1235
Eco88I CYCGRG 1 cut(s) 207
EcoICRI GAGCTC 1 cut(s) 409
EcoRII CCWGG 6 cut(s) 91, 147, 242, 294, 466, 522
EcoT14I CCWWGG 2 cut(s) 342, 528
EcoT38I GRGCYC 1 cut(s) 411
ErhI CCWWGG 2 cut(s) 342, 528
FaeI CATG 2 cut(s) 84, 346
FaqI GGGAC 4 cut(s) 376, 449, 1110, 1193
FatI CATG 2 cut(s) 80, 342
FbaI TGATCA 2 cut(s) 36, 1191
FblI GTMKAC 1 cut(s) 534
FokI GGATG 4 cut(s) 865, 986, 1216, 1414
FriOI GRGCYC 1 cut(s) 411
FspBI CTAG 1 cut(s) 1221
GlaI GCGC 5 cut(s) 19, 160, 780, 801, 1119
HaeII RGCGCY 2 cut(s) 21, 162
HapII CCGG 5 cut(s) 48, 125, 1233, 1293, 1329
HgaI GACGC 2 cut(s) 310, 321
HhaI GCGC 5 cut(s) 20, 161, 781, 802, 1120
Hin1I GRCGYC 2 cut(s) 332, 462
Hin1II CATG 2 cut(s) 84, 346
Hin6I GCGC 5 cut(s) 18, 159, 779, 800, 1118
HinP1I GCGC 5 cut(s) 18, 159, 779, 800, 1118
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HinfI GANTC 6 cut(s) 51, 316, 502, 640, 979, 1148
HpaII CCGG 5 cut(s) 48, 125, 1233, 1293, 1329
HphI GGTGA 4 cut(s) 46, 139, 323, 691
Hpy166II GTNNAC 5 cut(s) 130, 460, 535, 700, 768
Hpy188I TCNGA 4 cut(s) 25, 402, 507, 645
Hpy188III TCNNGA 4 cut(s) 932, 1186, 1211, 1360
Hpy8I GTNNAC 5 cut(s) 130, 460, 535, 700, 768
Hpy99I CGWCG 4 cut(s) 218, 284, 337, 539
HpyAV CCTTC 9 cut(s) 70, 644, 658, 676, 751, 799, 814, 1045, 1312
HpyCH4III ACNGT 2 cut(s) 1353, 1366
HpyCH4IV ACGT 3 cut(s) 279, 462, 537
HpyCH4V TGCA 5 cut(s) 440, 598, 835, 860, 1369
HpySE526I ACGT 3 cut(s) 279, 462, 537
Hsp92I GRCGYC 2 cut(s) 332, 462
Hsp92II CATG 2 cut(s) 84, 346
HspAI GCGC 5 cut(s) 18, 159, 779, 800, 1118
Ksp22I TGATCA 2 cut(s) 36, 1191
Kzo9I GATC 6 cut(s) 36, 66, 402, 630, 1191, 1224
LmnI GCTCC 4 cut(s) 174, 252, 286, 575
Lsp1109I GCAGC 7 cut(s) 245, 502, 592, 1009, 1031, 1042, 1374
LweI GCATC 3 cut(s) 309, 607, 964
MaeI CTAG 1 cut(s) 1221
MaeII ACGT 3 cut(s) 279, 462, 537
MaeIII GTNAC 1 cut(s) 485
MalI GATC 6 cut(s) 38, 68, 404, 632, 1193, 1226
MboI GATC 6 cut(s) 36, 66, 402, 630, 1191, 1224
MboII GAAGA 5 cut(s) 76, 511, 673, 766, 1093
MhlI GDGCHC 2 cut(s) 411, 1409
MlsI TGGCCA 1 cut(s) 96
MluCI AATT 2 cut(s) 1396, 1423
MluNI TGGCCA 1 cut(s) 96
MlyI GAGTC 4 cut(s) 310, 496, 634, 1142
Mox20I TGGCCA 1 cut(s) 96
MscI TGGCCA 1 cut(s) 96
MseI TTAA 2 cut(s) 447, 675
MslI CAYNNNNRTG 1 cut(s) 1142
Msp20I TGGCCA 1 cut(s) 96
MspA1I CMGCKG 2 cut(s) 258, 1022
MspI CCGG 5 cut(s) 48, 125, 1233, 1293, 1329
MspR9I CCNGG 7 cut(s) 93, 149, 244, 296, 468, 524, 1234
Mva1269I GAATGC 2 cut(s) 862, 1389
MvaI CCWGG 6 cut(s) 93, 149, 244, 296, 468, 524
MvnI CGCG 2 cut(s) 107, 321
NciI CCSGG 1 cut(s) 1234
NcoI CCATGG 1 cut(s) 342
NdeII GATC 6 cut(s) 36, 66, 402, 630, 1191, 1224
NlaIII CATG 2 cut(s) 84, 346
NlaIV GGNNCC 5 cut(s) 46, 205, 248, 364, 571
NmeAIII GCCGAG 7 cut(s) 187, 568, 646, 814, 913, 1051, 1117
NspV TTCGAA 1 cut(s) 141
PaqCI CACCTGC 1 cut(s) 772
PcsI WCGNNNNNNNCGW 2 cut(s) 258, 540
PctI GAATGC 2 cut(s) 862, 1389
PfeI GAWTC 2 cut(s) 51, 979
PleI GAGTC 4 cut(s) 310, 496, 634, 1142
PpsI GAGTC 4 cut(s) 310, 496, 634, 1142
PshAI GACNNNNGTC 1 cut(s) 320
PsiI TTATAA 1 cut(s) 1338
Psp124BI GAGCTC 1 cut(s) 411
Psp6I CCWGG 6 cut(s) 91, 147, 242, 294, 466, 522
PspGI CCWGG 6 cut(s) 91, 147, 242, 294, 466, 522
PspN4I GGNNCC 5 cut(s) 46, 205, 248, 364, 571
PspPI GGNCC 4 cut(s) 45, 203, 363, 826
PvuII CAGCTG 2 cut(s) 258, 1022
RsaI GTAC 1 cut(s) 87
RsaNI GTAC 1 cut(s) 86
RseI CAYNNNNRTG 1 cut(s) 1142
SacI GAGCTC 1 cut(s) 411
SalI GTCGAC 1 cut(s) 533
SaqAI TTAA 2 cut(s) 447, 675
Sau3AI GATC 6 cut(s) 36, 66, 402, 630, 1191, 1224
Sau96I GGNCC 4 cut(s) 45, 203, 363, 826
SchI GAGTC 4 cut(s) 310, 496, 634, 1142
ScrFI CCNGG 7 cut(s) 93, 149, 244, 296, 468, 524, 1234
SduI GDGCHC 2 cut(s) 411, 1409
SfaNI GCATC 3 cut(s) 309, 607, 964
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 1 cut(s) 363
SmiMI CAYNNNNRTG 1 cut(s) 1142
SmlI CTYRAG 2 cut(s) 881, 930
SmoI CTYRAG 2 cut(s) 881, 930
Sse9I AATT 2 cut(s) 1396, 1423
SspMI CTAG 1 cut(s) 1221
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 7 cut(s) 91, 147, 242, 294, 466, 522, 1232
StyI CCWWGG 2 cut(s) 342, 528
TaaI ACNGT 2 cut(s) 1353, 1366
TaiI ACGT 3 cut(s) 282, 465, 540
TaqI TCGA 8 cut(s) 141, 272, 282, 306, 335, 390, 405, 534
TasI AATT 2 cut(s) 1396, 1423
TauI GCSGC 5 cut(s) 1302, 1305, 1313, 1328, 1393
TfiI GAWTC 2 cut(s) 51, 979
Tru1I TTAA 2 cut(s) 447, 675
Tru9I TTAA 2 cut(s) 447, 675
TscAI CASTG 1 cut(s) 867
TseI GCWGC 7 cut(s) 258, 515, 605, 1019, 1022, 1055, 1387
TspDTI ATGAA 5 cut(s) 569, 767, 833, 869, 1331
TspRI CASTG 1 cut(s) 867
VpaK11BI GGWCC 1 cut(s) 363
XcmI CCANNNNNNNNNTGG 1 cut(s) 535
XmiI GTMKAC 1 cut(s) 534
XspI CTAG 1 cut(s) 1221
ZraI GACGTC 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.