Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000793

Physical Location & Seq

Genomic Coordinates Reverse (-)

57765737 .. 57769820

Gene Structure 4084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G033270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2883 bp

ATGTATAAGATAGCAAGCCCATCGGAGTATCTAGTTATCACCGGTGCCGGAATCAAAGACATCAAGATCTCAAAGAAGTCATGGGTGCTCCCCGGCCAGTCCTCGGTGGTCATCGACCTATCTCCAGTCAACTACACCTTCGAAGTCCAAGCCATGAGCGCCGAGAAGCTTCCTTTCGTCCTCCCCGCCGTCTTCACCATCGGTCCACGCGCCGAAGACATGGAGGCCCTCCAGAAGTACGCCAAGCTCATTTCCAACCACGACAAGAACTCCAACCATGTCAAGGAGCTCGTCCAGGGCATCATCGAGGGCGAGACACGTGTGCTCGCGGCCTCGATGACGATGGAGGAGGTCTTCAAGGGGACTAAAGAGTTCAAGAAGGAGGTTTTCGAGAAGGTTCAGCTGGAGTTGGATCAGTTCGGGCTTTTGATATACAATGCCAATGTTAAACAGTTGGTGGACGTTAGGGGACATGAGTATTTCAGTTACTTGGGGCAGAAGATTCAGATGGAGGCGGCCAACCAGGCCAAGGTTGACGTGGCGGAGGCCAAAATGAAGGGAGAGGTTGGCTCTAAGCTGAGGGAGGGGCAGACATTGCAAAACGCAGCCAAGATCGACTCCGAGACAAAGATCATTTCGACTCAGAGGCAAGGGGAGGGGAAGAAGGAGGAGATTAAGGTGAAAACGGAGGTCAAGGTTTATGAGAATCAGAGAGAAGCTGAGGTGGCTAAAGCGAATGCTGAGCTGGCAATGAAGAAGGCAGGGTGGGCTAAGGAGGCGCAGGTGGCCGAGGTTGAGGCGGAGAAGGCGGTGGCGATGAAGGATGCCGAGTTGCAGAAGGAGGTGGAGAGGATGAATGCATTGACTATGACTGAGAAGCTCAAGGCTGACTTCTTGAGCAAGGCTACTGTCGAATATGAAACCAAGGTACAAGAGGCAAATTGGGGGTTGTACAAGCAACAAAAAGAGGCGGAAGCAATTCTTTACCAGAGGGAGAAAGAAGCGCAGGCCCAAAAAGCAATGGCAGAGGCAAAATTCTATGCATGTAAACAAGCAGCTGATGGAGAATTCTATGCCAAGAAGAAAGAGGCTGAGGGACTAATTGCACTTGGACAAGCCCAGGGTGTGTACCTGCGCACTCTTTTGGACTCATTGGGAGGCAACTATGCAGCGTTGAGGGACTTCTTGATGATCCATGGTGGGATGTTTCAAGAAATTGCTAAGATTAATGCCGAGGCTGTGCGAGGGCTTGCACCGAAGATTAGTATCTGGACTAATGGCGGGGAGGGCGTGGATGGTGGTGGCAACAATGAAAATGCAGCTATGAAGGAGGTTGCTGGAGTTTACAAGATGTTACCACCGTTGTTCAAGACAGTGCATGAACAAACTGGAGTGCTGCCTCCCAGTTGGATGGCTACTTTGCCTGATATACCTCCAGTCATAATCTCTACCTTTGTTTTTGTATTGCTATACAATCAAATACAGATCGACATCATGTGTTTCCCATGCTGGTACAAAGTGGTCGACGCTTCCGAGTATCTGGTGATCACCGGTGCATGGATCGATGACTTGAAGGTGAAAAAGAAGGCATGGATCCTCCCCGGCCAGACCTACACCATCATCGACCTATCTCCAGTCAACTACACCTTCGAAGTCCAAGCCATGAGCGCCGAGAAGCTTCCGTTCATGCTCCCTGCCGTCTTCACAATCGGCCCCCGCATTGACGACATGGATTCCGTCAAGAAGTACGCCAAGCTGCTCTCGAACCATGACAAGAACTCCAACCACGTGAAGGAGCTGGTCCAGGGCGTCATCGAGGGAGAGACTCGTGTGCTCGCGGCCTCTATGACGATGGAGGAGGTGTTCAAGGGCACCAAAGAGTTTAAGAAGGAGGTTTGGGACAAGGTTCAGCTGGAGCTCAACCAGTTCGGGCTTATAATTTACAATGCGAATGTCAAACAGTTGGTGGACGTTCAAGGATATGAGTATTTCAGTTACTTGGGGCAGAAGACTCAGATGGAGGCGGCCAACCAGGCCAAGGTTGACGTGGCGGAGGCCAGGATGAAGGGGGAGGTTGGCGCCAAGTTGAGGGAGGGGCAGACCCTGCAGAATGCGGCGAAGATCAATGCAGAGACGAAGATCATATCGACTCAGAGGGAAGGAGAGGGGAAGAAGGAGGAGATTAGGGTGAAGACGGAGGTCAAGGTTTATGAGAATCAGAAGGAGGCTGAGGTGGCTCAGGCCAATGCTGAGCTGGCAATGAAGAAGGCCGGATGGGCCAGGGAGGCGCAGGTGGCGGAGGTGGAGTCGACCAAGGCGGTGGCGTTGAGGGAAGCCGAGTTGCAGAAGAAGGCGCGGGAGGCAGAATGGAATCTCTACCAGAAGCAGAGGGCAGCGGATGCCATTCTTTACCAAAAGAAGAAAGAGGCTGAGGCTACGGAAACAGCTGCTCAAGCACAGTTGTTTGCTCGTCAAAAGGTTGCTGATGGAGAATTCTATGCAAAGAAGAAAGAGGCCGAGGGACTGGTGGCACTCGGACAAGCCCACGGCGCTTATCTGCACACTCTTCTGGAGGCAAATGGAGGCGACTATGCAGCTGCGAGAGACTACATGATGATCAATGGTGGGATGTATTCGGCGATTGCAAGGATTAATGCTGACGCTGTGAAAGGACTTCAGCCCAAGATTAGCATCTGGACTAATGGGGGAGACGCTGCAGACGGTGGTGCTGGTGCTGGCAACGGCAATGCAGCTATGAAGGAGATTGCGGGCCTTTATAAGACACTGCCACCATTGTTACAGACGGTCCAAGACCAAACTGGAATGCAGCCTCCCAGTTGGATGGGAACTTTGTCAGTTGAAGATTCTCAGCGTAGGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009877 GO:0016020 GO:0016324 GO:0022622 GO:0032501 GO:0032502 GO:0044403 GO:0044419 GO:0044425 GO:0044459 GO:0044464 GO:0045177 GO:0048364 GO:0048731 GO:0048856 GO:0051704 GO:0071944 GO:0098590 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04910 map04910

Pfam Domains

Protein Families

Band_7

Protein Analysis

960

Amino Acids

106.31

Weight (kDa)

6.02

Isoelectric Point (pI)

25.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Band_7	PF01145	4 - 184	1.3e-20	SPFH domain / Band 7 family
Band_7	PF01145	507 - 686	2.3e-21	SPFH domain / Band 7 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25250 AT5G25260 AT5G64870
fragaria_vesca	FvH4_2g28360 FvH4_2g28361 FvH4_2g28363 FvH4_6g10190
malus_domestica	MD08G1153100.v1.1 MD15G1129900.v1.1 MD15G1130000.v1.1 MD15G1130100.v1.1
prunus_persica	Prupe.1G485400_v2.0.a1 Prupe.1G485500_v2.0.a1 Prupe.1G485600_v2.0.a1 Prupe.1G485600_v2.0.a1
pyrus_communis	pycom08g13240
rosa_chinensis	RchiOBHm_Chr3g0460921 RchiOBHm_Chr4g0425621 RchiOBHm_Chr4g0425631 RchiOBHm_Chr6g0297281 RchiOBHm_Chr6g0297301 RchiOBHm_Chr6g0297311
rosa_laevigata	RLG00000007352 RLG00000011612 RLG00000011613 RLG00000011615 RLG00000024965
rosa_multiflora	Rmu_co8465209.1_g000001 Rmu_sc0003958.1_g000017 Rmu_sc0004535.1_g000003 Rmu_sc0004535.1_g000007 Rmu_sc0004535.1_g000008 Rmu_sc0013249.1_g000009 Rmu_sc0021377.1_g000005
rosa_roxburghii	Rroxscaffold_4G00306830 Rroxscaffold_6G00419030 Rroxscaffold_7G00170670 Rroxscaffold_7G00170690
rosa_rugosa	Rorug03G0047100 Rorug04G0204200 Rorug04G0204400 Rorug06G0270200 Rorug06G0270500 Rorug06G0270600
rosa_samantha	Rh3AG104500 Rh3BG108200 Rh3CG109900 Rh3DG110000 Rh4AG261700 Rh4BG267600 Rh4CG278500 Rh4CG278700 Rh4DG263500 Rh6AG381700 Rh6AG381900 Rh6AG382000 Rh6BG389700 Rh6BG389900 Rh6BG390000 Rh6CG394900 Rh6CG395100 Rh6CG395200 Rh6DG381600 Rh6DG381900 Rh6DG382000
rosa_wichuraiana	Rw3G008900 Rw4G022620 Rw6G033250 Rw6G033270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1937, 2778
AarI	CACCTGC	2 cut(s)	772, 2281
Acc16I	TGCGCA	1 cut(s)	1136
Acc36I	ACCTGC	3 cut(s)	772, 1140, 2281
AccB1I	GGYRCC	3 cut(s)	44, 1871, 2078
AccI	GTMKAC	2 cut(s)	1524, 2309
AccII	CGCG	4 cut(s)	210, 329, 1838, 2356
AclWI	GGATC	5 cut(s)	420, 1186, 1568, 1588, 1601
AcoI	YGGCCR	5 cut(s)	94, 516, 786, 1603, 2025
AcsI	RAATTY	3 cut(s)	1034, 1067, 2492
AcuI	CTGAAG	1 cut(s)	2660
AcvI	CACGTG	2 cut(s)	320, 1789
AcyI	GRCGYC	2 cut(s)	1809, 2079
AfaI	GTAC	6 cut(s)	239, 930, 953, 1130, 1514, 1748
AfiI	CCNNNNNNNGG	7 cut(s)	103, 283, 529, 1557, 1792, 2038, 2088
AflIII	ACRYGT	2 cut(s)	317, 319
AgeI	ACCGGT	2 cut(s)	41, 1550
AgsI	TTSAA	8 cut(s)	358, 376, 1211, 1369, 1573, 1867, 1976, 2861
AjiI	CACGTC	2 cut(s)	538, 2047
AjnI	CCWGG	7 cut(s)	294, 522, 1119, 1803, 2031, 2057, 2279
AloI	GAACNNNNNNTCC	2 cut(s)	1847, 1879
Alw21I	GWGCWC	5 cut(s)	90, 291, 327, 1836, 1920
Alw26I	GTCTC	6 cut(s)	308, 617, 1817, 2126, 2598, 2703
AlwI	GGATC	5 cut(s)	420, 1186, 1568, 1588, 1601
AlwNI	CAGNNNCTG	1 cut(s)	2104
ApoI	RAATTY	3 cut(s)	1034, 1067, 2492
AseI	ATTAAT	2 cut(s)	1227, 2652
AsiGI	ACCGGT	2 cut(s)	41, 1550
Asp700I	GAANNNNTTC	1 cut(s)	978
AspS9I	GGNCC	8 cut(s)	203, 226, 1009, 1712, 1801, 2277, 2770, 2806
AsuC2I	CCSGG	2 cut(s)	93, 1602
AsuHPI	GGTGA	7 cut(s)	31, 187, 691, 1540, 1555, 1588, 2200
AsuII	TTCGAA	2 cut(s)	141, 1650
AvaII	GGWCC	3 cut(s)	203, 1801, 2806
BaeGI	GKGCMC	1 cut(s)	1874
BamHI	GGATCC	1 cut(s)	1593
BanI	GGYRCC	3 cut(s)	44, 1871, 2078
BanII	GRGCYC	2 cut(s)	291, 1920
BauI	CACGAG	1 cut(s)	1827
BbrPI	CACGTG	2 cut(s)	320, 1789
BbsI	GAAGAC	6 cut(s)	184, 222, 346, 1693, 2015, 2198
Bbv12I	GWGCWC	5 cut(s)	90, 291, 327, 1836, 1920
BbvCI	CCTCAGC	5 cut(s)	578, 720, 1092, 2229, 2430
BceAI	ACGGC	4 cut(s)	173, 1682, 2563, 2758
BcgI	CGANNNNNNTGC	1 cut(s)	37
BciT130I	CCWGG	7 cut(s)	296, 524, 1121, 1805, 2033, 2059, 2281
BclI	TGATCA	2 cut(s)	1545, 2616
BcnI	CCSGG	2 cut(s)	93, 1602
BcoDI	GTCTC	6 cut(s)	308, 617, 1817, 2126, 2598, 2703
BfaI	CTAG	1 cut(s)	32
BfmI	CTRYAG	2 cut(s)	2105, 2715
BfoI	RGCGCY	4 cut(s)	162, 1671, 2082, 2553
BfuAI	ACCTGC	3 cut(s)	772, 1140, 2281
BglI	GCCNNNNNGGC	4 cut(s)	524, 2033, 2276, 2285
BglII	AGATCT	1 cut(s)	66
BlpI	GCTNAGC	2 cut(s)	741, 2250
Bme1390I	CCNGG	9 cut(s)	93, 296, 524, 1121, 1602, 1805, 2033, 2059, 2281
Bme18I	GGWCC	3 cut(s)	203, 1801, 2806
BmgBI	CACGTC	2 cut(s)	538, 2047
BmgT120I	GGNCC	8 cut(s)	203, 226, 1009, 1712, 1801, 2277, 2770, 2806
BmiI	GGNNCC	5 cut(s)	46, 1595, 1714, 1873, 2080
BmrFI	CCNGG	9 cut(s)	93, 296, 524, 1121, 1602, 1805, 2033, 2059, 2281
BmrI	ACTGGG	2 cut(s)	1398, 2829
BmsI	GCATC	4 cut(s)	309, 814, 2389, 2700
BmuI	ACTGGG	2 cut(s)	1398, 2829
BoxI	GACNNNNGTC	1 cut(s)	2198
BpiI	GAAGAC	6 cut(s)	184, 222, 346, 1693, 2015, 2198
BplI	GAGNNNNNCTC	2 cut(s)	554, 586
BpmI	CTGGAG	9 cut(s)	108, 215, 425, 1359, 1410, 1419, 1617, 1934, 2591
Bpu10I	CCTNAGC	7 cut(s)	578, 720, 771, 1092, 2229, 2238, 2430
Bpu1102I	GCTNAGC	2 cut(s)	741, 2250
Bpu14I	TTCGAA	2 cut(s)	141, 1650
BpuEI	CTTGAG	3 cut(s)	866, 916, 2436
BpuMI	CCSGG	2 cut(s)	93, 1602
Bsa29I	ATCGAT	1 cut(s)	1563
BsaAI	YACGTR	2 cut(s)	320, 1789
BsaBI	GATNNNNATC	3 cut(s)	1265, 1490, 2690
BsaHI	GRCGYC	2 cut(s)	1809, 2079
BsaWI	WCCGGW	2 cut(s)	41, 1550
BsaXI	ACNNNNNCTCC	8 cut(s)	254, 284, 1763, 1793, 1847, 1877, 2291, 2321
Bsc4I	CCNNNNNNNGG	7 cut(s)	103, 283, 529, 1557, 1792, 2038, 2088
Bse118I	RCCGGY	2 cut(s)	41, 1550
Bse3DI	GCAATG	5 cut(s)	593, 756, 1026, 2265, 2752
Bse8I	GATNNNNATC	3 cut(s)	1265, 1490, 2690
BseBI	CCWGG	7 cut(s)	296, 524, 1121, 1805, 2033, 2059, 2281
BseCI	ATCGAT	1 cut(s)	1563
BseJI	GATNNNNATC	3 cut(s)	1265, 1490, 2690
BseLI	CCNNNNNNNGG	7 cut(s)	103, 283, 529, 1557, 1792, 2038, 2088
BseMI	GCAATG	5 cut(s)	593, 756, 1026, 2265, 2752
BseRI	GAGGAG	4 cut(s)	362, 683, 1871, 2192
BseSI	GKGCMC	1 cut(s)	1874
BsgI	GTGCAG	1 cut(s)	2543
Bsh1236I	CGCG	4 cut(s)	210, 329, 1838, 2356
BshNI	GGYRCC	3 cut(s)	44, 1871, 2078
BshTI	ACCGGT	2 cut(s)	41, 1550
BshVI	ATCGAT	1 cut(s)	1563
BsiHKAI	GWGCWC	5 cut(s)	90, 291, 327, 1836, 1920
BsiSI	CCGG	6 cut(s)	42, 48, 93, 1551, 1602, 2271
BslFI	GGGAC	6 cut(s)	376, 483, 1110, 1193, 1913, 2535
BslI	CCNNNNNNNGG	7 cut(s)	103, 283, 529, 1557, 1792, 2038, 2088
BsmAI	GTCTC	6 cut(s)	308, 617, 1817, 2126, 2598, 2703
BsmBI	CGTCTC	2 cut(s)	2126, 2703
BsmFI	GGGAC	6 cut(s)	376, 483, 1110, 1193, 1913, 2535
BsmI	GAATGC	4 cut(s)	742, 862, 2116, 2829
Bsp119I	TTCGAA	2 cut(s)	141, 1650
Bsp1286I	GDGCHC	6 cut(s)	90, 291, 327, 1836, 1874, 1920
Bsp1407I	TGTACA	1 cut(s)	951
Bsp1720I	GCTNAGC	2 cut(s)	741, 2250
Bsp19I	CCATGG	1 cut(s)	1195
BspDI	ATCGAT	1 cut(s)	1563
BspFNI	CGCG	4 cut(s)	210, 329, 1838, 2356
BspLI	GGNNCC	5 cut(s)	46, 1595, 1714, 1873, 2080
BspMAI	CTGCAG	2 cut(s)	2109, 2719
BspMI	ACCTGC	3 cut(s)	772, 1140, 2281
BspPI	GGATC	5 cut(s)	420, 1186, 1568, 1588, 1601
BspT104I	TTCGAA	2 cut(s)	141, 1650
BspT107I	GGYRCC	3 cut(s)	44, 1871, 2078
BsrDI	GCAATG	5 cut(s)	593, 756, 1026, 2265, 2752
BsrFI	RCCGGY	2 cut(s)	41, 1550
BsrGI	TGTACA	1 cut(s)	951
BssAI	RCCGGY	2 cut(s)	41, 1550
BssNI	GRCGYC	2 cut(s)	1809, 2079
BssSI	CACGAG	1 cut(s)	1827
BssT1I	CCWWGG	5 cut(s)	528, 924, 1195, 2037, 2313
Bst2BI	CACGAG	1 cut(s)	1827
Bst2UI	CCWGG	7 cut(s)	296, 524, 1121, 1805, 2033, 2059, 2281
Bst4CI	ACNGT	8 cut(s)	453, 910, 1362, 1375, 1962, 2460, 2723, 2806
Bst6I	CTCTTC	1 cut(s)	2571
BstACI	GRCGYC	2 cut(s)	1809, 2079
BstAPI	GCANNNNNTGC	3 cut(s)	595, 2104, 2399
BstAUI	TGTACA	1 cut(s)	951
BstBAI	YACGTR	2 cut(s)	320, 1789
BstBI	TTCGAA	2 cut(s)	141, 1650
BstC8I	GCNNGC	9 cut(s)	16, 327, 747, 1008, 1251, 1836, 2256, 2737, 2770
BstDSI	CCRYGG	2 cut(s)	1195, 2545
BstFNI	CGCG	4 cut(s)	210, 329, 1838, 2356
BstH2I	RGCGCY	4 cut(s)	162, 1671, 2082, 2553
BstMAI	GTCTC	6 cut(s)	308, 617, 1817, 2126, 2598, 2703
BstNI	CCWGG	7 cut(s)	296, 524, 1121, 1805, 2033, 2059, 2281
BstNSI	RCATGY	1 cut(s)	1047
BstPAI	GACNNNNGTC	1 cut(s)	2198
BstSCI	CCNGG	9 cut(s)	91, 294, 522, 1119, 1600, 1803, 2031, 2057, 2279
BstSFI	CTRYAG	2 cut(s)	2105, 2715
BstSLI	GKGCMC	1 cut(s)	1874
BstUI	CGCG	4 cut(s)	210, 329, 1838, 2356
BstV2I	GAAGAC	6 cut(s)	184, 222, 346, 1693, 2015, 2198
BstX2I	RGATCY	2 cut(s)	66, 1593
BstXI	CCANNNNNNTGG	3 cut(s)	1411, 2320, 2842
BstYI	RGATCY	2 cut(s)	66, 1593
Bsu15I	ATCGAT	1 cut(s)	1563
BsuTUI	ATCGAT	1 cut(s)	1563
BtgI	CCRYGG	2 cut(s)	1195, 2545
BtgZI	GCGATG	1 cut(s)	830
BtrI	CACGTC	2 cut(s)	538, 2047
BtsI	GCAGTG	1 cut(s)	2783
BtsIMutI	CAGTG	2 cut(s)	1380, 2783
BveI	ACCTGC	3 cut(s)	772, 1140, 2281
Cac8I	GCNNGC	9 cut(s)	16, 327, 747, 1008, 1251, 1836, 2256, 2737, 2770
CaiI	CAGNNNCTG	1 cut(s)	2104
Cfr10I	RCCGGY	2 cut(s)	41, 1550
Cfr13I	GGNCC	8 cut(s)	203, 226, 1009, 1712, 1801, 2277, 2770, 2806
ClaI	ATCGAT	1 cut(s)	1563
CseI	GACGC	4 cut(s)	1535, 1798, 2669, 2720
Csp6I	GTAC	6 cut(s)	238, 929, 952, 1129, 1513, 1747
CspAI	ACCGGT	2 cut(s)	41, 1550
CviQI	GTAC	6 cut(s)	238, 929, 952, 1129, 1513, 1747
DinI	GGCGCC	1 cut(s)	2080
EaeI	YGGCCR	5 cut(s)	94, 516, 786, 1603, 2025
Eam1104I	CTCTTC	1 cut(s)	2571
EarI	CTCTTC	1 cut(s)	2571
EciI	GGCGGA	5 cut(s)	557, 815, 986, 2066, 2312
Ecl136II	GAGCTC	2 cut(s)	289, 1918
Eco130I	CCWWGG	5 cut(s)	528, 924, 1195, 2037, 2313
Eco24I	GRGCYC	2 cut(s)	291, 1920
Eco47I	GGWCC	3 cut(s)	203, 1801, 2806
Eco53kI	GAGCTC	2 cut(s)	289, 1918
Eco57I	CTGAAG	1 cut(s)	2660
Eco72I	CACGTG	2 cut(s)	320, 1789
EcoICRI	GAGCTC	2 cut(s)	289, 1918
EcoO109I	RGGNCCY	1 cut(s)	226
EcoRI	GAATTC	2 cut(s)	1067, 2492
EcoRII	CCWGG	7 cut(s)	294, 522, 1119, 1803, 2031, 2057, 2279
EcoT14I	CCWWGG	5 cut(s)	528, 924, 1195, 2037, 2313
EcoT22I	ATGCAT	2 cut(s)	862, 1045
EcoT38I	GRGCYC	2 cut(s)	291, 1920
EgeI	GGCGCC	1 cut(s)	2080
EheI	GGCGCC	1 cut(s)	2080
ErhI	CCWWGG	5 cut(s)	528, 924, 1195, 2037, 2313
Esp3I	CGTCTC	2 cut(s)	2126, 2703
FalI	AAGNNNNNCTT	4 cut(s)	875, 907, 966, 998
FaqI	GGGAC	6 cut(s)	376, 483, 1110, 1193, 1913, 2535
FauI	CCCGC	5 cut(s)	193, 1274, 1724, 2349, 2761
FbaI	TGATCA	2 cut(s)	1545, 2616
FblI	GTMKAC	2 cut(s)	1524, 2309
FriOI	GRGCYC	2 cut(s)	291, 1920
FspBI	CTAG	1 cut(s)	32
FspI	TGCGCA	1 cut(s)	1136
GsuI	CTGGAG	9 cut(s)	108, 215, 425, 1359, 1410, 1419, 1617, 1934, 2591
HaeII	RGCGCY	4 cut(s)	162, 1671, 2082, 2553
HapII	CCGG	6 cut(s)	42, 48, 93, 1551, 1602, 2271
HgaI	GACGC	4 cut(s)	1535, 1798, 2669, 2720
Hin1I	GRCGYC	2 cut(s)	1809, 2079
HincII	GTYRAC	6 cut(s)	130, 535, 1525, 1639, 2044, 2310
HindII	GTYRAC	6 cut(s)	130, 535, 1525, 1639, 2044, 2310
HindIII	AAGCTT	2 cut(s)	167, 1676
HpaII	CCGG	6 cut(s)	42, 48, 93, 1551, 1602, 2271
HphI	GGTGA	7 cut(s)	31, 187, 691, 1540, 1555, 1588, 2200
Hpy99I	CGWCG	1 cut(s)	1529
HpyCH4III	ACNGT	8 cut(s)	453, 910, 1362, 1375, 1962, 2460, 2723, 2806
HpyCH4IV	ACGT	6 cut(s)	319, 462, 537, 1788, 1971, 2046
HpySE526I	ACGT	6 cut(s)	319, 462, 537, 1788, 1971, 2046
Hsp92I	GRCGYC	2 cut(s)	1809, 2079
KasI	GGCGCC	1 cut(s)	2078
Ksp22I	TGATCA	2 cut(s)	1545, 2616
LmnI	GCTCC	5 cut(s)	93, 286, 1695, 1795, 1915
LweI	GCATC	4 cut(s)	309, 814, 2389, 2700
MaeI	CTAG	1 cut(s)	32
MaeII	ACGT	6 cut(s)	319, 462, 537, 1788, 1971, 2046
MaeIII	GTNAC	4 cut(s)	485, 1353, 1994, 2796
MflI	RGATCY	2 cut(s)	66, 1593
MhlI	GDGCHC	6 cut(s)	90, 291, 327, 1836, 1874, 1920
MluCI	AATT	9 cut(s)	940, 978, 1034, 1067, 1101, 1215, 1938, 2492, 2878
Mly113I	GGCGCC	1 cut(s)	2079
MlyI	GAGTC	7 cut(s)	611, 634, 1142, 1819, 2005, 2143, 2315
MmeI	TCCRAC	6 cut(s)	279, 297, 390, 1388, 1806, 2819
Mph1103I	ATGCAT	2 cut(s)	862, 1045
MroXI	GAANNNNTTC	1 cut(s)	978
MseI	TTAA	5 cut(s)	447, 675, 1227, 1884, 2652
MspA1I	CMGCKG	6 cut(s)	403, 1058, 1912, 2396, 2447, 2597
MspI	CCGG	6 cut(s)	42, 48, 93, 1551, 1602, 2271
MspR9I	CCNGG	9 cut(s)	93, 296, 524, 1121, 1602, 1805, 2033, 2059, 2281
Mva1269I	GAATGC	4 cut(s)	742, 862, 2116, 2829
MvaI	CCWGG	7 cut(s)	296, 524, 1121, 1805, 2033, 2059, 2281
MvnI	CGCG	4 cut(s)	210, 329, 1838, 2356
NarI	GGCGCC	1 cut(s)	2079
NciI	CCSGG	2 cut(s)	93, 1602
NcoI	CCATGG	1 cut(s)	1195
NlaIV	GGNNCC	5 cut(s)	46, 1595, 1714, 1873, 2080
NmeAIII	GCCGAG	7 cut(s)	187, 814, 853, 1258, 1696, 2362, 2542
NsbI	TGCGCA	1 cut(s)	1136
NsiI	ATGCAT	2 cut(s)	862, 1045
NspI	RCATGY	1 cut(s)	1047
NspV	TTCGAA	2 cut(s)	141, 1650
PaqCI	CACCTGC	2 cut(s)	772, 2281
PasI	CCCWGGG	1 cut(s)	1120
PcsI	WCGNNNNNNNCGW	1 cut(s)	1530
PctI	GAATGC	4 cut(s)	742, 862, 2116, 2829
PdmI	GAANNNNTTC	1 cut(s)	978
PfeI	GAWTC	7 cut(s)	51, 502, 706, 1733, 2215, 2371, 2864
PinAI	ACCGGT	2 cut(s)	41, 1550
PleI	GAGTC	7 cut(s)	611, 634, 1142, 1819, 2005, 2143, 2314
PluTI	GGCGCC	1 cut(s)	2082
PmaCI	CACGTG	2 cut(s)	320, 1789
PmlI	CACGTG	2 cut(s)	320, 1789
PpsI	GAGTC	7 cut(s)	611, 634, 1142, 1819, 2005, 2143, 2314
Ppu21I	YACGTR	2 cut(s)	320, 1789
PshAI	GACNNNNGTC	1 cut(s)	2198
PshBI	ATTAAT	2 cut(s)	1227, 2652
PsiI	TTATAA	2 cut(s)	1937, 2778
Psp124BI	GAGCTC	2 cut(s)	291, 1920
Psp6I	CCWGG	7 cut(s)	294, 522, 1119, 1803, 2031, 2057, 2279
PspCI	CACGTG	2 cut(s)	320, 1789
PspGI	CCWGG	7 cut(s)	294, 522, 1119, 1803, 2031, 2057, 2279
PspN4I	GGNNCC	5 cut(s)	46, 1595, 1714, 1873, 2080
PspPI	GGNCC	8 cut(s)	203, 226, 1009, 1712, 1801, 2277, 2770, 2806
PstI	CTGCAG	2 cut(s)	2109, 2719
PstNI	CAGNNNCTG	1 cut(s)	2104
PsuI	RGATCY	2 cut(s)	66, 1593
PvuII	CAGCTG	5 cut(s)	403, 1058, 1912, 2447, 2597
RsaI	GTAC	6 cut(s)	239, 930, 953, 1130, 1514, 1748
RsaNI	GTAC	6 cut(s)	238, 929, 952, 1129, 1513, 1747
SacI	GAGCTC	2 cut(s)	291, 1920
SalI	GTCGAC	2 cut(s)	1523, 2308
SaqAI	TTAA	5 cut(s)	447, 675, 1227, 1884, 2652
Sau96I	GGNCC	8 cut(s)	203, 226, 1009, 1712, 1801, 2277, 2770, 2806
SchI	GAGTC	7 cut(s)	611, 634, 1142, 1819, 2005, 2143, 2315
ScrFI	CCNGG	9 cut(s)	93, 296, 524, 1121, 1602, 1805, 2033, 2059, 2281
SduI	GDGCHC	6 cut(s)	90, 291, 327, 1836, 1874, 1920
SfaNI	GCATC	4 cut(s)	309, 814, 2389, 2700
SfcI	CTRYAG	2 cut(s)	2105, 2715
SfiI	GGCCNNNNNGGCC	3 cut(s)	524, 2033, 2276
SfoI	GGCGCC	1 cut(s)	2080
SfuI	TTCGAA	2 cut(s)	141, 1650
SgrAI	CRCCGGYG	2 cut(s)	41, 1550
SinI	GGWCC	3 cut(s)	203, 1801, 2806
SmlI	CTYRAG	3 cut(s)	881, 895, 2451
SmoI	CTYRAG	3 cut(s)	881, 895, 2451
Sse9I	AATT	9 cut(s)	940, 978, 1034, 1067, 1101, 1215, 1938, 2492, 2878
SspDI	GGCGCC	1 cut(s)	2078
SspMI	CTAG	1 cut(s)	32
SstI	GAGCTC	2 cut(s)	291, 1920
StyD4I	CCNGG	9 cut(s)	91, 294, 522, 1119, 1600, 1803, 2031, 2057, 2279
StyI	CCWWGG	5 cut(s)	528, 924, 1195, 2037, 2313
TaaI	ACNGT	8 cut(s)	453, 910, 1362, 1375, 1962, 2460, 2723, 2806
TaiI	ACGT	6 cut(s)	322, 465, 540, 1791, 1974, 2049
TaqII	GACCGA	1 cut(s)	191
TasI	AATT	9 cut(s)	940, 978, 1034, 1067, 1101, 1215, 1938, 2492, 2878
TatI	WGTACW	1 cut(s)	951
TauI	GCSGC	5 cut(s)	332, 518, 1841, 2027, 2117
TfiI	GAWTC	7 cut(s)	51, 502, 706, 1733, 2215, 2371, 2864
Tru1I	TTAA	5 cut(s)	447, 675, 1227, 1884, 2652
Tru9I	TTAA	5 cut(s)	447, 675, 1227, 1884, 2652
TscAI	CASTG	2 cut(s)	1380, 2790
TspGWI	ACGGA	5 cut(s)	701, 1671, 1726, 2210, 2453
TspRI	CASTG	2 cut(s)	1380, 2790
VpaK11BI	GGWCC	3 cut(s)	203, 1801, 2806
VspI	ATTAAT	2 cut(s)	1227, 2652
XapI	RAATTY	3 cut(s)	1034, 1067, 2492
XceI	RCATGY	1 cut(s)	1047
XcmI	CCANNNNNNNNNTGG	4 cut(s)	535, 2044, 2251, 2816
XmiI	GTMKAC	2 cut(s)	1524, 2309
XmnI	GAANNNNTTC	1 cut(s)	978
XspI	CTAG	1 cut(s)	32
Zsp2I	ATGCAT	2 cut(s)	862, 1045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.