Rh4AG261700

Flotillin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000793
Physical Location & Seq
Reverse (-)
57751941 .. 57752222
282 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG261700.1

Sequence Viewer

Length: 237 bp
ATGGAGGAGGTCTTCAAAGGGACCAAAGAGTTCAAGAAGGAGGTGTTTGAGAAGGTTCAGCTGGAGTTGGATCAGTTCGGGCTTTTGATATACAATGCCAATGTTAAACAATTGGTGGACATGGAGGCTGCCAACCAGGCCAAGGTTGATGTGGCCGAGGCCAAAATGAAGGGAGAGGTTGGCTCTAAGATGAGGGAGGGGCAGACATTGCAAAACGGAGGCAAGATCGACTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Band_7

Protein Analysis

78

Amino Acids

8.74

Weight (kDa)

5.14

Isoelectric Point (pI)

11.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 78
AcoI YGGCCR 1 cut(s) 153
AfiI CCNNNNNNNGG 1 cut(s) 142
AgsI TTSAA 2 cut(s) 16, 34
AjnI CCWGG 1 cut(s) 135
AluBI AGCT 1 cut(s) 61
AluI AGCT 1 cut(s) 61
AlwI GGATC 1 cut(s) 78
AoxI GGCC 3 cut(s) 138, 153, 159
ApeKI GCWGC 1 cut(s) 128
AspS9I GGNCC 1 cut(s) 21
AvaII GGWCC 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 4
BbvI GCAGC 1 cut(s) 115
BciT130I CCWGG 1 cut(s) 137
BfaI CTAG 1 cut(s) 235
BglI GCCNNNNNGGC 1 cut(s) 137
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
Bme1390I CCNGG 1 cut(s) 137
Bme18I GGWCC 1 cut(s) 21
BmgT120I GGNCC 1 cut(s) 21
BmiI GGNNCC 1 cut(s) 22
BmrFI CCNGG 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 4
BplI GAGNNNNNCTC 2 cut(s) 167, 199
BpmI CTGGAG 1 cut(s) 83
BsaJI CCNNGG 2 cut(s) 141, 156
Bsc4I CCNNNNNNNGG 1 cut(s) 142
Bse3DI GCAATG 1 cut(s) 206
BseBI CCWGG 1 cut(s) 137
BseDI CCNNGG 2 cut(s) 141, 156
BseLI CCNNNNNNNGG 1 cut(s) 142
BseMI GCAATG 1 cut(s) 206
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 115
BshFI GGCC 3 cut(s) 140, 155, 161
BslFI GGGAC 1 cut(s) 34
BslI CCNNNNNNNGG 1 cut(s) 142
BsmFI GGGAC 1 cut(s) 34
BsnI GGCC 3 cut(s) 140, 155, 161
Bsp143I GATC 2 cut(s) 70, 225
BspANI GGCC 3 cut(s) 140, 155, 161
BspLI GGNNCC 1 cut(s) 22
BspPI GGATC 1 cut(s) 78
BsrDI GCAATG 1 cut(s) 206
BssECI CCNNGG 2 cut(s) 141, 156
BssMI GATC 2 cut(s) 70, 225
BssT1I CCWWGG 1 cut(s) 141
Bst2UI CCWGG 1 cut(s) 137
BstAPI GCANNNNNTGC 1 cut(s) 208
BstDEI CTNAG 1 cut(s) 186
BstKTI GATC 2 cut(s) 73, 228
BstMBI GATC 2 cut(s) 70, 225
BstMWI GCNNNNNNNGC 2 cut(s) 137, 208
BstNI CCWGG 1 cut(s) 137
BstSCI CCNGG 1 cut(s) 135
BstV1I GCAGC 1 cut(s) 115
BstV2I GAAGAC 1 cut(s) 4
BsuRI GGCC 3 cut(s) 140, 155, 161
Cfr13I GGNCC 1 cut(s) 21
CviAII CATG 1 cut(s) 121
CviJI RGCY 7 cut(s) 61, 82, 128, 140, 155, 161, 183
CviKI_1 RGCY 7 cut(s) 61, 82, 128, 140, 155, 161, 183
DdeI CTNAG 1 cut(s) 186
DpnI GATC 2 cut(s) 72, 227
DpnII GATC 2 cut(s) 70, 225
EaeI YGGCCR 1 cut(s) 153
Eco130I CCWWGG 1 cut(s) 141
Eco47I GGWCC 1 cut(s) 21
EcoRII CCWGG 1 cut(s) 135
EcoT14I CCWWGG 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 141
FaeI CATG 1 cut(s) 124
FaiI YATR 2 cut(s) 91, 122
FaqI GGGAC 1 cut(s) 34
FatI CATG 1 cut(s) 120
Fnu4HI GCNGC 1 cut(s) 129
Fsp4HI GCNGC 1 cut(s) 129
FspBI CTAG 1 cut(s) 235
GluI GCNGC 1 cut(s) 129
GsuI CTGGAG 1 cut(s) 83
HaeIII GGCC 3 cut(s) 140, 155, 161
Hin1II CATG 1 cut(s) 124
HinfI GANTC 1 cut(s) 230
Hpy166II GTNNAC 1 cut(s) 118
Hpy188III TCNNGA 1 cut(s) 34
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 3 cut(s) 31, 46, 163
HpyCH4V TGCA 1 cut(s) 211
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 208
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 1 cut(s) 124
Kzo9I GATC 2 cut(s) 70, 225
LpnPI CCDG 3 cut(s) 47, 122, 149
Lsp1109I GCAGC 1 cut(s) 115
MaeI CTAG 1 cut(s) 235
MalI GATC 2 cut(s) 72, 227
MboI GATC 2 cut(s) 70, 225
MboII GAAGA 1 cut(s) 4
MfeI CAATTG 1 cut(s) 110
MluCI AATT 1 cut(s) 110
MlyI GAGTC 1 cut(s) 224
MmeI TCCRAC 1 cut(s) 48
MnlI CCTC 7 cut(s) 34, 118, 151, 169, 186, 190, 212
MseI TTAA 1 cut(s) 105
MspA1I CMGCKG 1 cut(s) 61
MspR9I CCNGG 1 cut(s) 137
MunI CAATTG 1 cut(s) 110
MvaI CCWGG 1 cut(s) 137
MwoI GCNNNNNNNGC 2 cut(s) 137, 208
NdeII GATC 2 cut(s) 70, 225
NlaIII CATG 1 cut(s) 124
NlaIV GGNNCC 1 cut(s) 22
NmeAIII GCCGAG 1 cut(s) 181
PkrI GCNGC 1 cut(s) 130
PleI GAGTC 1 cut(s) 224
PpsI GAGTC 1 cut(s) 224
Psp6I CCWGG 1 cut(s) 135
PspGI CCWGG 1 cut(s) 135
PspN4I GGNNCC 1 cut(s) 22
PspPI GGNCC 1 cut(s) 21
PvuII CAGCTG 1 cut(s) 61
SaqAI TTAA 1 cut(s) 105
SatI GCNGC 1 cut(s) 129
Sau3AI GATC 2 cut(s) 70, 225
Sau96I GGNCC 1 cut(s) 21
SchI GAGTC 1 cut(s) 224
ScrFI CCNGG 1 cut(s) 137
SetI ASST 6 cut(s) 12, 45, 57, 63, 147, 180
SgeI CNNG 8 cut(s) 46, 74, 91, 133, 148, 149, 154, 169
SinI GGWCC 1 cut(s) 21
Sse9I AATT 1 cut(s) 110
SspMI CTAG 1 cut(s) 235
StyD4I CCNGG 1 cut(s) 135
StyI CCWWGG 1 cut(s) 141
TaqI TCGA 1 cut(s) 228
TasI AATT 1 cut(s) 110
Tru1I TTAA 1 cut(s) 105
Tru9I TTAA 1 cut(s) 105
TseI GCWGC 1 cut(s) 128
TspDTI ATGAA 1 cut(s) 182
TspGWI ACGGA 1 cut(s) 231
VpaK11BI GGWCC 1 cut(s) 21
XcmI CCANNNNNNNNNTGG 1 cut(s) 148
XspI CTAG 1 cut(s) 235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.