MD15G1129900.v1.1

Flotillin-like protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
9402140 .. 9404111
1972 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1129900.v1.1.491

Sequence Viewer

Length: 1440 bp
ATGTATAGAGTTGCAAGCCCTTCAGAGTATCTGGTGATCACGGGGGTCGGAATCGATGACATAAAGCTAGCAAAGAAGGCATGGATCCTCCCCGGCCAGTCCTTCATAATCTTCGACATGTCCCCGGTTAACTATACCTTCGAAGTCCAAGCCATGAGCTCGGAAAAGCTTCCCTTCATGCTCCCCGCCGTCTTCACCATCGGCCCACGCATTGACGACATGGAAAGCCTCCACAAGTACGCCAAGCTCATTTCTCGCCACGACAAGCTCTCCAGCCACGTCAAAGAGCTTGTGCAGGGAATCATAGAAGGCGAGACGCGTGTTCTCGCTGCCTCGATGACCATGGAGGAGGTGTTTAAGGGGACCAAAGAGTTTAAGCAAGAGGTGTTTGGGAAGGTTCAGTTGGAACTTAACCAGTTTGGGCTTTTGATATATAATGCAAATGTCAAACAGTTGGTGGATGTCCCAGGGCATGAGTATTTTAGTTACTTGGGGCAGAAGACACAGATGGAGGCGGCGAATCAAGCAAGGGTTGATGTGGCGGAGGCAAAGAAGAAGGGGGAGATAGGGTCGAAGCTGAGGGAGGGGGAGACGTTGCAGAACGCGGCTAAGATTGACGCGGAGACTAAGATATATGGGACGAAGAGAGAGGGGGAGGGGAGGATGGCGGAGATTAAGGTGAAGGCGGAGGTGAAGGTGTATGAGAATGTAAGGGAGGCTGAGGTGGCCGAGGCAAATGCTGAGCTGGCGAAGAAGAAGGCCGGGTGGGCGAAAGAGGCGCAGGTGGCGGAGGTGGAGGCTGCAAAGGCAGTGGCATTGAGGGATGCGGAGTTGCAAACGGAGGTGGAGAGGATGAATGCCTTGACTATGACGGAGAAGCTTAAAGCTGAGTTTTTGAGTAAGGCCAGCGTTGAGTATGAAACGAAGGTACAAGAGGCGAATTGGGAGTTATACAACAAACAAAAAGCCTCAGAGGCAATTCTTTACCAAAGGGAGAAGGAGGCAGATGCCAAAAAGGCATTGGCGGAGGCAGAATTCTGTGCACGTCAACAAGCTGCCGATGGAGAATTTTATGCCAAGAAAAAAGAGGCTGAGGGACTCATGGCTCTTGGACAAACTCAAGGTGCATATCTACGCCACCTTTTGGATGCAGTTGGAGGCAACTATGCAGCCATGAGAGACTTTATGATGATCAATAGTGGCATGTTTCAAGAAATTGCTAAGATCAACGCCGAGGCCGTGCGCGGGCTTCAGCCGAAAATCAGCATTTGGACTAATGGCGGGGGAGAGGGTGGTGATGGTGGTGCAAATGGGGCTATGAAGGAAATTTCCGGAGTTTACAAGATGTTGCCACCGTTGTTCAAGACGGTTCATGAACAAACCGGCATGTCGCCTCCTGCTTGGATGGGCACTTTGGACAATTCTCATCCTAGCAACTAA

Protein Analysis

480

Amino Acids

53.01

Weight (kDa)

5.77

Isoelectric Point (pI)

31.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Band_7 PF01145 4 - 184 9.5e-22 SPFH domain / Band 7 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 772
Acc36I ACCTGC 1 cut(s) 772
AccB7I CCANNNNNTGG 1 cut(s) 1144
AccII CGCG 4 cut(s) 319, 605, 620, 1245
AccIII TCCGGA 1 cut(s) 1331
AclWI GGATC 2 cut(s) 79, 92
AcoI YGGCCR 2 cut(s) 94, 726
AcsI RAATTY 3 cut(s) 1034, 1067, 1326
AcuI CTGAAG 2 cut(s) 6, 1235
AfaI GTAC 2 cut(s) 239, 930
AfiI CCNNNNNNNGG 2 cut(s) 1144, 1245
AflIII ACRYGT 2 cut(s) 117, 317
AgsI TTSAA 2 cut(s) 1211, 1363
AjiI CACGTC 2 cut(s) 280, 1046
AjnI CCWGG 1 cut(s) 466
AjuI GAANNNNNNNTTGG 2 cut(s) 386, 418
Alw21I GWGCWC 2 cut(s) 161, 1045
Alw26I GTCTC 4 cut(s) 308, 584, 617, 1173
Alw44I GTGCAC 1 cut(s) 1041
AlwI GGATC 2 cut(s) 79, 92
Aor13HI TCCGGA 1 cut(s) 1331
AoxI GGCC 6 cut(s) 94, 202, 726, 759, 903, 1236
ApaLI GTGCAC 1 cut(s) 1041
ApeKI GCWGC 4 cut(s) 329, 800, 1055, 1169
ApoI RAATTY 3 cut(s) 1034, 1067, 1326
Asp700I GAANNNNTTC 1 cut(s) 168
AspLEI GCGC 2 cut(s) 781, 1245
AspS9I GGNCC 2 cut(s) 203, 363
AsuC2I CCSGG 3 cut(s) 93, 125, 763
AsuHPI GGTGA 5 cut(s) 46, 187, 691, 703, 1307
AsuII TTCGAA 1 cut(s) 141
AsuNHI GCTAGC 1 cut(s) 67
AvaII GGWCC 1 cut(s) 363
BaeGI GKGCMC 2 cut(s) 1045, 1412
BamHI GGATCC 1 cut(s) 84
BanII GRGCYC 1 cut(s) 161
BbsI GAAGAC 2 cut(s) 184, 506
Bbv12I GWGCWC 2 cut(s) 161, 1045
BbvCI CCTCAGC 3 cut(s) 578, 720, 1092
BbvI GCAGC 4 cut(s) 316, 787, 1042, 1181
BccI CCATC 6 cut(s) 206, 502, 658, 1055, 1292, 1399
BceAI ACGGC 2 cut(s) 173, 1223
BcgI CGANNNNNNTGC 2 cut(s) 719, 753
BciT130I CCWGG 1 cut(s) 468
BclI TGATCA 2 cut(s) 36, 1191
BcnI CCSGG 3 cut(s) 93, 125, 763
BcoDI GTCTC 4 cut(s) 308, 584, 617, 1173
BfaI CTAG 2 cut(s) 68, 1431
BfuAI ACCTGC 1 cut(s) 772
BglI GCCNNNNNGGC 3 cut(s) 767, 974, 1016
BisI GCNGC 6 cut(s) 330, 516, 606, 801, 1056, 1170
BlpI GCTNAGC 1 cut(s) 741
BlsI GCNGC 6 cut(s) 331, 517, 607, 802, 1057, 1171
Bme1390I CCNGG 4 cut(s) 93, 125, 468, 763
Bme18I GGWCC 1 cut(s) 363
BmgBI CACGTC 2 cut(s) 280, 1046
BmgT120I GGNCC 2 cut(s) 203, 363
BmiI GGNNCC 2 cut(s) 86, 364
BmrFI CCNGG 4 cut(s) 93, 125, 468, 763
BmsI GCATC 3 cut(s) 814, 997, 1138
BmtI GCTAGC 1 cut(s) 71
BpiI GAAGAC 2 cut(s) 184, 506
BpmI CTGGAG 1 cut(s) 256
Bpu10I CCTNAGC 3 cut(s) 578, 720, 1092
Bpu1102I GCTNAGC 1 cut(s) 741
Bpu14I TTCGAA 1 cut(s) 141
BpuEI CTTGAG 1 cut(s) 1104
BpuMI CCSGG 3 cut(s) 93, 125, 763
Bsa29I ATCGAT 1 cut(s) 54
BsaJI CCNNGG 7 cut(s) 91, 123, 342, 466, 467, 729, 1233
BsaWI WCCGGW 1 cut(s) 1331
BsaXI ACNNNNNCTCC 6 cut(s) 254, 284, 338, 368, 554, 584
Bsc4I CCNNNNNNNGG 2 cut(s) 1144, 1245
Bse118I RCCGGY 1 cut(s) 1382
Bse1I ACTGG 2 cut(s) 97, 415
BseAI TCCGGA 1 cut(s) 1331
BseBI CCWGG 1 cut(s) 468
BseCI ATCGAT 1 cut(s) 54
BseDI CCNNGG 7 cut(s) 91, 123, 342, 466, 467, 729, 1233
BseGI GGATG 7 cut(s) 466, 669, 829, 858, 1153, 1410, 1426
BseLI CCNNNNNNNGG 2 cut(s) 1144, 1245
BseMII CTCAG 6 cut(s) 569, 711, 732, 879, 984, 1083
BseNI ACTGG 2 cut(s) 97, 415
BseRI GAGGAG 1 cut(s) 362
BseSI GKGCMC 2 cut(s) 1045, 1412
BseXI GCAGC 4 cut(s) 316, 787, 1042, 1181
BsgI GTGCAG 1 cut(s) 314
Bsh1236I CGCG 4 cut(s) 319, 605, 620, 1245
BshFI GGCC 6 cut(s) 96, 204, 728, 761, 905, 1238
BshVI ATCGAT 1 cut(s) 54
BsiHKAI GWGCWC 2 cut(s) 161, 1045
BsiSI CCGG 5 cut(s) 93, 125, 762, 1332, 1383
BslFI GGGAC 5 cut(s) 106, 376, 449, 652, 1110
BslI CCNNNNNNNGG 2 cut(s) 1144, 1245
BsmAI GTCTC 4 cut(s) 308, 584, 617, 1173
BsmBI CGTCTC 2 cut(s) 308, 584
BsmFI GGGAC 5 cut(s) 106, 376, 449, 652, 1110
BsmI GAATGC 1 cut(s) 862
BsnI GGCC 6 cut(s) 96, 204, 728, 761, 905, 1238
Bsp119I TTCGAA 1 cut(s) 141
Bsp1286I GDGCHC 3 cut(s) 161, 1045, 1412
Bsp13I TCCGGA 1 cut(s) 1331
Bsp143I GATC 4 cut(s) 36, 84, 1191, 1224
Bsp1720I GCTNAGC 1 cut(s) 741
Bsp19I CCATGG 1 cut(s) 342
BspANI GGCC 6 cut(s) 96, 204, 728, 761, 905, 1238
BspCNI CTCAG 6 cut(s) 570, 712, 733, 880, 983, 1084
BspDI ATCGAT 1 cut(s) 54
BspEI TCCGGA 1 cut(s) 1331
BspFNI CGCG 4 cut(s) 319, 605, 620, 1245
BspHI TCATGA 1 cut(s) 1372
BspLI GGNNCC 2 cut(s) 86, 364
BspMI ACCTGC 1 cut(s) 772
BspOI GCTAGC 1 cut(s) 71
BspPI GGATC 2 cut(s) 79, 92
BspT104I TTCGAA 1 cut(s) 141
BsrFI RCCGGY 1 cut(s) 1382
BsrI ACTGG 2 cut(s) 97, 415
BssAI RCCGGY 1 cut(s) 1382
BssECI CCNNGG 7 cut(s) 91, 123, 342, 466, 467, 729, 1233
BssMI GATC 4 cut(s) 36, 84, 1191, 1224
BssT1I CCWWGG 1 cut(s) 342
Bst2UI CCWGG 1 cut(s) 468
Bst4CI ACNGT 3 cut(s) 453, 1356, 1369
Bst6I CTCTTC 1 cut(s) 638
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 5 cut(s) 16, 69, 747, 907, 1247
BstDEI CTNAG 9 cut(s) 578, 609, 627, 720, 741, 888, 970, 1092, 1221
BstDSI CCRYGG 1 cut(s) 342
BstF5I GGATG 7 cut(s) 466, 669, 829, 858, 1153, 1410, 1426
BstFNI CGCG 4 cut(s) 319, 605, 620, 1245
BstHHI GCGC 2 cut(s) 781, 1245
BstKTI GATC 4 cut(s) 39, 87, 1194, 1227
BstMAI GTCTC 4 cut(s) 308, 584, 617, 1173
BstMBI GATC 4 cut(s) 36, 84, 1191, 1224
BstNI CCWGG 1 cut(s) 468
BstNSI RCATGY 3 cut(s) 121, 1207, 1390
BstSCI CCNGG 4 cut(s) 91, 123, 466, 761
BstSLI GKGCMC 2 cut(s) 1045, 1412
BstUI CGCG 4 cut(s) 319, 605, 620, 1245
BstV1I GCAGC 4 cut(s) 316, 787, 1042, 1181
BstV2I GAAGAC 2 cut(s) 184, 506
BstX2I RGATCY 1 cut(s) 84
BstYI RGATCY 1 cut(s) 84
Bsu15I ATCGAT 1 cut(s) 54
BsuRI GGCC 6 cut(s) 96, 204, 728, 761, 905, 1238
BsuTUI ATCGAT 1 cut(s) 54
BtgI CCRYGG 1 cut(s) 342
BtrI CACGTC 2 cut(s) 280, 1046
BtsCI GGATG 7 cut(s) 466, 669, 829, 858, 1153, 1410, 1426
BtsI GCAGTG 1 cut(s) 816
BtsIMutI CAGTG 1 cut(s) 816
BveI ACCTGC 1 cut(s) 772
Cac8I GCNNGC 5 cut(s) 16, 69, 747, 907, 1247
CciI TCATGA 1 cut(s) 1372
CfoI GCGC 2 cut(s) 781, 1245
Cfr10I RCCGGY 1 cut(s) 1382
Cfr13I GGNCC 2 cut(s) 203, 363
ClaI ATCGAT 1 cut(s) 54
CseI GACGC 2 cut(s) 325, 626
Csp6I GTAC 2 cut(s) 238, 929
CspCI CAANNNNNGTGG 2 cut(s) 792, 827
CviQI GTAC 2 cut(s) 238, 929
DdeI CTNAG 9 cut(s) 578, 609, 627, 720, 741, 888, 970, 1092, 1221
DpnI GATC 4 cut(s) 38, 86, 1193, 1226
DpnII GATC 4 cut(s) 36, 84, 1191, 1224
EaeI YGGCCR 2 cut(s) 94, 726
Eam1104I CTCTTC 1 cut(s) 638
EarI CTCTTC 1 cut(s) 638
EciI GGCGGA 5 cut(s) 557, 683, 701, 803, 1040
Ecl136II GAGCTC 1 cut(s) 159
Eco130I CCWWGG 1 cut(s) 342
Eco24I GRGCYC 1 cut(s) 161
Eco47I GGWCC 1 cut(s) 363
Eco53kI GAGCTC 1 cut(s) 159
Eco57I CTGAAG 2 cut(s) 6, 1235
EcoICRI GAGCTC 1 cut(s) 159
EcoRI GAATTC 1 cut(s) 1034
EcoRII CCWGG 1 cut(s) 466
EcoT14I CCWWGG 1 cut(s) 342
EcoT38I GRGCYC 1 cut(s) 161
ErhI CCWWGG 1 cut(s) 342
Esp3I CGTCTC 2 cut(s) 308, 584
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FaqI GGGAC 5 cut(s) 106, 376, 449, 652, 1110
FauI CCCGC 3 cut(s) 193, 1238, 1274
FbaI TGATCA 2 cut(s) 36, 1191
Fnu4HI GCNGC 6 cut(s) 330, 516, 606, 801, 1056, 1170
FokI GGATG 7 cut(s) 473, 676, 836, 865, 1160, 1413, 1417
FriOI GRGCYC 1 cut(s) 161
Fsp4HI GCNGC 6 cut(s) 330, 516, 606, 801, 1056, 1170
FspBI CTAG 2 cut(s) 68, 1431
GlaI GCGC 2 cut(s) 780, 1244
GluI GCNGC 6 cut(s) 330, 516, 606, 801, 1056, 1170
GsuI CTGGAG 1 cut(s) 256
HaeIII GGCC 6 cut(s) 96, 204, 728, 761, 905, 1238
HapII CCGG 5 cut(s) 93, 125, 762, 1332, 1383
HgaI GACGC 2 cut(s) 325, 626
HhaI GCGC 2 cut(s) 781, 1245
Hin6I GCGC 2 cut(s) 779, 1243
HinP1I GCGC 2 cut(s) 779, 1243
HincII GTYRAC 2 cut(s) 130, 1049
HindII GTYRAC 2 cut(s) 130, 1049
HindIII AAGCTT 2 cut(s) 167, 878
HinfI GANTC 4 cut(s) 51, 300, 520, 1098
HpaI GTTAAC 1 cut(s) 130
HpaII CCGG 5 cut(s) 93, 125, 762, 1332, 1383
HphI GGTGA 5 cut(s) 46, 187, 691, 703, 1307
Hpy166II GTNNAC 4 cut(s) 130, 1043, 1049, 1339
Hpy188I TCNGA 4 cut(s) 25, 50, 163, 973
Hpy188III TCNNGA 4 cut(s) 1211, 1332, 1363, 1373
Hpy8I GTNNAC 4 cut(s) 130, 1043, 1049, 1339
HpyCH4III ACNGT 3 cut(s) 453, 1356, 1369
HpyCH4IV ACGT 3 cut(s) 279, 593, 1045
HpyF3I CTNAG 9 cut(s) 578, 609, 627, 720, 741, 888, 970, 1092, 1221
HpySE526I ACGT 3 cut(s) 279, 593, 1045
HspAI GCGC 2 cut(s) 779, 1243
Kpn2I TCCGGA 1 cut(s) 1331
Ksp22I TGATCA 2 cut(s) 36, 1191
KspAI GTTAAC 1 cut(s) 130
Kzo9I GATC 4 cut(s) 36, 84, 1191, 1224
LmnI GCTCC 1 cut(s) 186
Lsp1109I GCAGC 4 cut(s) 316, 787, 1042, 1181
LweI GCATC 3 cut(s) 814, 997, 1138
MaeI CTAG 2 cut(s) 68, 1431
MaeII ACGT 3 cut(s) 279, 593, 1045
MaeIII GTNAC 1 cut(s) 485
MalI GATC 4 cut(s) 38, 86, 1193, 1226
MboI GATC 4 cut(s) 36, 84, 1191, 1224
MboII GAAGA 7 cut(s) 103, 184, 511, 565, 655, 763, 766
MflI RGATCY 1 cut(s) 84
MhlI GDGCHC 3 cut(s) 161, 1045, 1412
MluCI AATT 7 cut(s) 940, 978, 1034, 1067, 1215, 1326, 1420
MluI ACGCGT 1 cut(s) 317
MlyI GAGTC 1 cut(s) 1092
MmeI TCCRAC 3 cut(s) 28, 384, 1135
MroI TCCGGA 1 cut(s) 1331
MroXI GAANNNNTTC 1 cut(s) 168
MseI TTAA 6 cut(s) 129, 357, 375, 411, 675, 882
MspI CCGG 5 cut(s) 93, 125, 762, 1332, 1383
MspR9I CCNGG 4 cut(s) 93, 125, 468, 763
Mva1269I GAATGC 1 cut(s) 862
MvaI CCWGG 1 cut(s) 468
MvnI CGCG 4 cut(s) 319, 605, 620, 1245
NciI CCSGG 3 cut(s) 93, 125, 763
NcoI CCATGG 1 cut(s) 342
NdeII GATC 4 cut(s) 36, 84, 1191, 1224
NheI GCTAGC 1 cut(s) 67
NlaIV GGNNCC 2 cut(s) 86, 364
NmeAIII GCCGAG 2 cut(s) 754, 1258
NspI RCATGY 3 cut(s) 121, 1207, 1390
NspV TTCGAA 1 cut(s) 141
PagI TCATGA 1 cut(s) 1372
PaqCI CACCTGC 1 cut(s) 772
PasI CCCWGGG 1 cut(s) 467
PciI ACATGT 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 1236
PctI GAATGC 1 cut(s) 862
PdmI GAANNNNTTC 1 cut(s) 168
PfeI GAWTC 3 cut(s) 51, 300, 520
PflMI CCANNNNNTGG 1 cut(s) 1144
PkrI GCNGC 6 cut(s) 331, 517, 607, 802, 1057, 1171
PleI GAGTC 1 cut(s) 1092
PpsI GAGTC 1 cut(s) 1092
PscI ACATGT 1 cut(s) 117
Psp124BI GAGCTC 1 cut(s) 161
Psp6I CCWGG 1 cut(s) 466
PspGI CCWGG 1 cut(s) 466
PspN4I GGNNCC 2 cut(s) 86, 364
PspPI GGNCC 2 cut(s) 203, 363
PsuI RGATCY 1 cut(s) 84
RsaI GTAC 2 cut(s) 239, 930
RsaNI GTAC 2 cut(s) 238, 929
SacI GAGCTC 1 cut(s) 161
SaqAI TTAA 6 cut(s) 129, 357, 375, 411, 675, 882
SatI GCNGC 6 cut(s) 330, 516, 606, 801, 1056, 1170
Sau3AI GATC 4 cut(s) 36, 84, 1191, 1224
Sau96I GGNCC 2 cut(s) 203, 363
SchI GAGTC 1 cut(s) 1092
ScrFI CCNGG 4 cut(s) 93, 125, 468, 763
SduI GDGCHC 3 cut(s) 161, 1045, 1412
SfaNI GCATC 3 cut(s) 814, 997, 1138
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 1 cut(s) 363
SmlI CTYRAG 1 cut(s) 1119
SmoI CTYRAG 1 cut(s) 1119
Sse9I AATT 7 cut(s) 940, 978, 1034, 1067, 1215, 1326, 1420
SspMI CTAG 2 cut(s) 68, 1431
SstI GAGCTC 1 cut(s) 161
StyD4I CCNGG 4 cut(s) 91, 123, 466, 761
StyI CCWWGG 1 cut(s) 342
TaaI ACNGT 3 cut(s) 453, 1356, 1369
TaiI ACGT 3 cut(s) 282, 596, 1048
TaqI TCGA 5 cut(s) 54, 114, 141, 335, 572
TasI AATT 7 cut(s) 940, 978, 1034, 1067, 1215, 1326, 1420
TauI GCSGC 2 cut(s) 518, 608
TfiI GAWTC 3 cut(s) 51, 300, 520
Tru1I TTAA 6 cut(s) 129, 357, 375, 411, 675, 882
Tru9I TTAA 6 cut(s) 129, 357, 375, 411, 675, 882
TscAI CASTG 1 cut(s) 816
TseI GCWGC 4 cut(s) 329, 800, 1055, 1169
TspDTI ATGAA 7 cut(s) 94, 166, 869, 933, 1334, 1361, 1389
TspGWI ACGGA 2 cut(s) 854, 887
TspRI CASTG 1 cut(s) 816
Van91I CCANNNNNTGG 1 cut(s) 1144
VneI GTGCAC 1 cut(s) 1041
VpaK11BI GGWCC 1 cut(s) 363
XapI RAATTY 3 cut(s) 1034, 1067, 1326
XceI RCATGY 3 cut(s) 121, 1207, 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 1018
XmnI GAANNNNTTC 1 cut(s) 168
XspI CTAG 2 cut(s) 68, 1431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.