Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000793

Physical Location & Seq

Genomic Coordinates Forward (+)

11008269 .. 11009964

Gene Structure 1696 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011612

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGTATAAGATAGCAAGCCCATCGGAGTATCTAGTTATCACCGGTGCCGGAATCAAAGACATCAAGATCGCAAAGAAGTCATGGGTGCTCCCCGGCCAGTCCTCGGTAGTCATCGACCTATCTCCAGTCAACTACACCTTCGAAGTCCAAGCCATGAGCGCAGAGAAGCTTCCTTTCGTCCTTCCCGCCGTCTTCACCATCGGTCCACGTGCCGAAGACATTGTGGCCCTCCAGAAGTACGCCAAGCTCATTTCCAACCACGACAAGAACTCCAACCATGTTAAGGAGCTCGTCCAGGGCATCATCGAGGGCGAGACACGTGTGCTCGCGGCCTCGATGACGATGGAAGAGGTCTTCAAGGGGACTAAAGAGTTCAAGAAGGAGGTTTTCGAGAAGGTTCAGCTGGAGTTGGATCAGTTCGGGCTTTTGATATACAATGCCAATGTTAAACAGTTGGTGGACGTTAGGGGACATGAGTATTTCAGTTACTTGGGGCAGAAGATTCAGATGGAGGCTGCCAACCAGGCCAAGGTTGACGTGGCCGAGGCCAAAATGAAGGGAGAGGTTGGCTCTAAGCTGAGGGAGGGGCAGACATTGCAAAACGCAGCCAAGATCGACTCCGAGACGAAGATCATTTCGACTCAGAGGCAAGGGGAGGGGAAGAAGGAGGAGATTAAGGTGAAAACGGAGGTCAAGGTTTATGAGAATCAGAGAGAAGCTGAGGTGGCTAAAGCGAATGCTGAGCTGGCAATGAAGAAGGCAGGGTGGGCTAAGGAGGCGCAGGTGGCCGAGGTTGAGGCGGAGAAGGCGGTGGCGATGAAGGATGCCGAGTTGCAGAAGGAGGTGGAGAGGATGAATGCATTGACTATGACTGAGAAGCTCAAGGCTGACTTCTTGAGCAAGGCTACTGTCGAATATGAAACCAAGGTACAAGAGGCAAATTGGGGGTTGTACAAGCAACAAAAAGAGGCGGAAGCAATTCTTTACCAGAGGGAGAAAGAAGCGCAGGCCCAAAAAGCAATGGCAGAGGCAAAATTCTATGCATGTAAACAAGCAGCTGATGGAGAATTCTATGCCAAGAAGAAAGAGGCTGAGGGACTAATTGCACTTGGACAAGCCCAGGGTGTGTACCTGCGCACTCTTTTGGACTCATTGGGAGGCAACTATGCAGCCTTGAGGGACTTCTTGATGATCAATGGTGGGATGTTTCAAGAAATTGCTAAGATTAATGCCGAGGCTGTGCGAGGGCTTGCGCCGAAGATTAGTATCTGGACTAATGGCGGGGAGGGCGTGGATGGTGGTGGCAACAATGAAAATGCAGCTATGAAGGAGGTTGCTGGAGTTTACAAGATGTTACCACCGTTGTTCAAGACAGTGCATGAACAAACTGGAGTGCTGCCTCCCAGTTGGATGGCTACTTTGCCTGATAAATCTCCGTCAGGCAGCTCTAGCGACTTGACTTCAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006897 GO:0006950 GO:0008150 GO:0009506 GO:0009628 GO:0009987 GO:0010324 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0030054 GO:0031090 GO:0031410 GO:0031982 GO:0033554 GO:0036293 GO:0036294 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0061024 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071840 GO:0071944 GO:0097708 GO:0098588 GO:0098657 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04910 map04910

Pfam Domains

Protein Families

Band_7

Protein Analysis

490

Amino Acids

53.85

Weight (kDa)

6.08

Isoelectric Point (pI)

28.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Band_7	PF01145	4 - 184	5.8e-21	SPFH domain / Band 7 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25250 AT5G25260 AT5G64870
fragaria_vesca	FvH4_2g28360 FvH4_2g28361 FvH4_2g28363 FvH4_6g10190
malus_domestica	MD08G1153100.v1.1 MD15G1129900.v1.1 MD15G1130000.v1.1 MD15G1130100.v1.1
prunus_persica	Prupe.1G485400_v2.0.a1 Prupe.1G485500_v2.0.a1 Prupe.1G485600_v2.0.a1 Prupe.1G485600_v2.0.a1
pyrus_communis	pycom08g13240
rosa_chinensis	RchiOBHm_Chr3g0460921 RchiOBHm_Chr4g0425621 RchiOBHm_Chr4g0425631 RchiOBHm_Chr6g0297281 RchiOBHm_Chr6g0297301 RchiOBHm_Chr6g0297311
rosa_laevigata	RLG00000007352 RLG00000011612 RLG00000011613 RLG00000011615 RLG00000024965
rosa_multiflora	Rmu_co8465209.1_g000001 Rmu_sc0003958.1_g000017 Rmu_sc0004535.1_g000003 Rmu_sc0004535.1_g000007 Rmu_sc0004535.1_g000008 Rmu_sc0013249.1_g000009 Rmu_sc0021377.1_g000005
rosa_roxburghii	Rroxscaffold_4G00306830 Rroxscaffold_6G00419030 Rroxscaffold_7G00170670 Rroxscaffold_7G00170690
rosa_rugosa	Rorug03G0047100 Rorug04G0204200 Rorug04G0204400 Rorug06G0270200 Rorug06G0270500 Rorug06G0270600
rosa_samantha	Rh3AG104500 Rh3BG108200 Rh3CG109900 Rh3DG110000 Rh4AG261700 Rh4BG267600 Rh4CG278500 Rh4CG278700 Rh4DG263500 Rh6AG381700 Rh6AG381900 Rh6AG382000 Rh6BG389700 Rh6BG389900 Rh6BG390000 Rh6CG394900 Rh6CG395100 Rh6CG395200 Rh6DG381600 Rh6DG381900 Rh6DG382000
rosa_wichuraiana	Rw3G008900 Rw4G022620 Rw6G033250 Rw6G033270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	772
Acc16I	TGCGCA	1 cut(s)	1136
Acc36I	ACCTGC	2 cut(s)	772, 1140
AccB1I	GGYRCC	1 cut(s)	44
AccII	CGCG	1 cut(s)	329
AciI	CCGC	6 cut(s)	186, 329, 800, 809, 971, 1281
AclWI	GGATC	1 cut(s)	420
AcoI	YGGCCR	3 cut(s)	94, 540, 786
AcsI	RAATTY	2 cut(s)	1034, 1067
AcvI	CACGTG	2 cut(s)	209, 320
AfaI	GTAC	4 cut(s)	239, 930, 953, 1130
AfiI	CCNNNNNNNGG	3 cut(s)	103, 283, 529
AflIII	ACRYGT	2 cut(s)	317, 319
AgeI	ACCGGT	1 cut(s)	41
AgsI	TTSAA	5 cut(s)	358, 376, 1211, 1369, 1464
AjiI	CACGTC	1 cut(s)	538
AjnI	CCWGG	3 cut(s)	294, 522, 1119
Alw21I	GWGCWC	3 cut(s)	90, 291, 327
Alw26I	GTCTC	2 cut(s)	308, 617
AlwI	GGATC	1 cut(s)	420
AoxI	GGCC	8 cut(s)	94, 225, 330, 525, 540, 546, 786, 1008
ApeKI	GCWGC	7 cut(s)	515, 605, 1055, 1169, 1319, 1396, 1443
ApoI	RAATTY	2 cut(s)	1034, 1067
AseI	ATTAAT	1 cut(s)	1227
AsiGI	ACCGGT	1 cut(s)	41
Asp700I	GAANNNNTTC	1 cut(s)	978
AspLEI	GCGC	5 cut(s)	161, 781, 1006, 1137, 1255
AspS9I	GGNCC	3 cut(s)	203, 226, 1009
AsuC2I	CCSGG	1 cut(s)	93
AsuHPI	GGTGA	3 cut(s)	31, 187, 691
AsuII	TTCGAA	1 cut(s)	141
AvaII	GGWCC	1 cut(s)	203
BanI	GGYRCC	1 cut(s)	44
BanII	GRGCYC	1 cut(s)	291
BbrPI	CACGTG	2 cut(s)	209, 320
BbsI	GAAGAC	3 cut(s)	184, 222, 346
Bbv12I	GWGCWC	3 cut(s)	90, 291, 327
BbvCI	CCTCAGC	3 cut(s)	578, 720, 1092
BbvI	GCAGC	7 cut(s)	502, 617, 1067, 1181, 1331, 1383, 1455
BccI	CCATC	7 cut(s)	28, 206, 337, 502, 1055, 1289, 1405
BceAI	ACGGC	1 cut(s)	173
BcgI	CGANNNNNNTGC	1 cut(s)	37
BciT130I	CCWGG	3 cut(s)	296, 524, 1121
BclI	TGATCA	1 cut(s)	1191
BcnI	CCSGG	1 cut(s)	93
BcoDI	GTCTC	2 cut(s)	308, 617
BfaI	CTAG	2 cut(s)	32, 1449
BfuAI	ACCTGC	2 cut(s)	772, 1140
BglI	GCCNNNNNGGC	1 cut(s)	524
BisI	GCNGC	8 cut(s)	330, 516, 606, 1056, 1170, 1320, 1397, 1444
BlpI	GCTNAGC	1 cut(s)	741
BlsI	GCNGC	8 cut(s)	331, 517, 607, 1057, 1171, 1321, 1398, 1445
Bme1390I	CCNGG	4 cut(s)	93, 296, 524, 1121
Bme18I	GGWCC	1 cut(s)	203
BmgBI	CACGTC	1 cut(s)	538
BmgT120I	GGNCC	3 cut(s)	203, 226, 1009
BmiI	GGNNCC	1 cut(s)	46
BmrFI	CCNGG	4 cut(s)	93, 296, 524, 1121
BmrI	ACTGGG	1 cut(s)	1398
BmsI	GCATC	2 cut(s)	309, 814
BmuI	ACTGGG	1 cut(s)	1398
BpiI	GAAGAC	3 cut(s)	184, 222, 346
BplI	GAGNNNNNCTC	2 cut(s)	554, 586
BpmI	CTGGAG	5 cut(s)	108, 215, 425, 1359, 1410
Bpu10I	CCTNAGC	4 cut(s)	578, 720, 771, 1092
Bpu1102I	GCTNAGC	1 cut(s)	741
Bpu14I	TTCGAA	1 cut(s)	141
BpuEI	CTTGAG	3 cut(s)	866, 916, 1195
BpuMI	CCSGG	1 cut(s)	93
BsaAI	YACGTR	2 cut(s)	209, 320
BsaBI	GATNNNNATC	1 cut(s)	1265
BsaWI	WCCGGW	1 cut(s)	41
BsaXI	ACNNNNNCTCC	2 cut(s)	254, 284
Bsc4I	CCNNNNNNNGG	3 cut(s)	103, 283, 529
Bse118I	RCCGGY	1 cut(s)	41
Bse1I	ACTGG	4 cut(s)	97, 125, 1393, 1404
Bse3DI	GCAATG	3 cut(s)	593, 756, 1026
Bse8I	GATNNNNATC	1 cut(s)	1265
BseBI	CCWGG	3 cut(s)	296, 524, 1121
BseGI	GGATG	5 cut(s)	829, 858, 1209, 1300, 1416
BseJI	GATNNNNATC	1 cut(s)	1265
BseLI	CCNNNNNNNGG	3 cut(s)	103, 283, 529
BseMI	GCAATG	3 cut(s)	593, 756, 1026
BseMII	CTCAG	6 cut(s)	569, 656, 711, 732, 864, 1083
BseNI	ACTGG	4 cut(s)	97, 125, 1393, 1404
BseRI	GAGGAG	1 cut(s)	683
BseXI	GCAGC	7 cut(s)	502, 617, 1067, 1181, 1331, 1383, 1455
Bsh1236I	CGCG	1 cut(s)	329
BshFI	GGCC	8 cut(s)	96, 227, 332, 527, 542, 548, 788, 1010
BshNI	GGYRCC	1 cut(s)	44
BshTI	ACCGGT	1 cut(s)	41
BsiHKAI	GWGCWC	3 cut(s)	90, 291, 327
BsiSI	CCGG	3 cut(s)	42, 48, 93
BslFI	GGGAC	4 cut(s)	376, 483, 1110, 1193
BslI	CCNNNNNNNGG	3 cut(s)	103, 283, 529
BsmAI	GTCTC	2 cut(s)	308, 617
BsmBI	CGTCTC	1 cut(s)	617
BsmFI	GGGAC	4 cut(s)	376, 483, 1110, 1193
BsmI	GAATGC	2 cut(s)	742, 862
BsnI	GGCC	8 cut(s)	96, 227, 332, 527, 542, 548, 788, 1010
Bsp119I	TTCGAA	1 cut(s)	141
Bsp1286I	GDGCHC	3 cut(s)	90, 291, 327
Bsp1407I	TGTACA	1 cut(s)	951
Bsp143I	GATC	5 cut(s)	66, 412, 612, 630, 1191
Bsp1720I	GCTNAGC	1 cut(s)	741
BspACI	CCGC	6 cut(s)	186, 329, 800, 809, 971, 1281
BspANI	GGCC	8 cut(s)	96, 227, 332, 527, 542, 548, 788, 1010
BspCNI	CTCAG	6 cut(s)	570, 655, 712, 733, 865, 1084
BspFNI	CGCG	1 cut(s)	329
BspLI	GGNNCC	1 cut(s)	46
BspMI	ACCTGC	2 cut(s)	772, 1140
BspPI	GGATC	1 cut(s)	420
BspT104I	TTCGAA	1 cut(s)	141
BspT107I	GGYRCC	1 cut(s)	44
BsrDI	GCAATG	3 cut(s)	593, 756, 1026
BsrFI	RCCGGY	1 cut(s)	41
BsrGI	TGTACA	1 cut(s)	951
BsrI	ACTGG	4 cut(s)	97, 125, 1393, 1404
BssAI	RCCGGY	1 cut(s)	41
BssMI	GATC	5 cut(s)	66, 412, 612, 630, 1191
BssT1I	CCWWGG	2 cut(s)	528, 924
Bst2UI	CCWGG	3 cut(s)	296, 524, 1121
Bst4CI	ACNGT	4 cut(s)	453, 910, 1362, 1375
Bst6I	CTCTTC	1 cut(s)	342
BstAPI	GCANNNNNTGC	1 cut(s)	595
BstAUI	TGTACA	1 cut(s)	951
BstBAI	YACGTR	2 cut(s)	209, 320
BstBI	TTCGAA	1 cut(s)	141
BstC8I	GCNNGC	5 cut(s)	16, 327, 747, 1008, 1251
BstDEI	CTNAG	9 cut(s)	573, 578, 642, 720, 741, 771, 873, 1092, 1221
BstF5I	GGATG	5 cut(s)	829, 858, 1209, 1300, 1416
BstFNI	CGCG	1 cut(s)	329
BstHHI	GCGC	5 cut(s)	161, 781, 1006, 1137, 1255
BstKTI	GATC	5 cut(s)	69, 415, 615, 633, 1194
BstMAI	GTCTC	2 cut(s)	308, 617
BstMBI	GATC	5 cut(s)	66, 412, 612, 630, 1191
BstNI	CCWGG	3 cut(s)	296, 524, 1121
BstNSI	RCATGY	1 cut(s)	1047
BstSCI	CCNGG	4 cut(s)	91, 294, 522, 1119
BstUI	CGCG	1 cut(s)	329
BstV1I	GCAGC	7 cut(s)	502, 617, 1067, 1181, 1331, 1383, 1455
BstV2I	GAAGAC	3 cut(s)	184, 222, 346
BstXI	CCANNNNNNTGG	1 cut(s)	1411
BsuRI	GGCC	8 cut(s)	96, 227, 332, 527, 542, 548, 788, 1010
BtgZI	GCGATG	1 cut(s)	830
BtrI	CACGTC	1 cut(s)	538
BtsCI	GGATG	5 cut(s)	829, 858, 1209, 1300, 1416
BtsIMutI	CAGTG	1 cut(s)	1380
BveI	ACCTGC	2 cut(s)	772, 1140
Cac8I	GCNNGC	5 cut(s)	16, 327, 747, 1008, 1251
CfoI	GCGC	5 cut(s)	161, 781, 1006, 1137, 1255
Cfr10I	RCCGGY	1 cut(s)	41
Cfr13I	GGNCC	3 cut(s)	203, 226, 1009
Csp6I	GTAC	4 cut(s)	238, 929, 952, 1129
CspAI	ACCGGT	1 cut(s)	41
CviAII	CATG	6 cut(s)	81, 154, 278, 473, 1044, 1379
CviQI	GTAC	4 cut(s)	238, 929, 952, 1129
DdeI	CTNAG	9 cut(s)	573, 578, 642, 720, 741, 771, 873, 1092, 1221
DpnI	GATC	5 cut(s)	68, 414, 614, 632, 1193
DpnII	GATC	5 cut(s)	66, 412, 612, 630, 1191
EaeI	YGGCCR	3 cut(s)	94, 540, 786
Eam1104I	CTCTTC	1 cut(s)	342
EarI	CTCTTC	1 cut(s)	342
EciI	GGCGGA	2 cut(s)	815, 986
Ecl136II	GAGCTC	1 cut(s)	289
Eco130I	CCWWGG	2 cut(s)	528, 924
Eco24I	GRGCYC	1 cut(s)	291
Eco47I	GGWCC	1 cut(s)	203
Eco53kI	GAGCTC	1 cut(s)	289
Eco72I	CACGTG	2 cut(s)	209, 320
EcoICRI	GAGCTC	1 cut(s)	289
EcoRI	GAATTC	1 cut(s)	1067
EcoRII	CCWGG	3 cut(s)	294, 522, 1119
EcoT14I	CCWWGG	2 cut(s)	528, 924
EcoT22I	ATGCAT	2 cut(s)	862, 1045
EcoT38I	GRGCYC	1 cut(s)	291
ErhI	CCWWGG	2 cut(s)	528, 924
Esp3I	CGTCTC	1 cut(s)	617
FaeI	CATG	6 cut(s)	84, 157, 281, 476, 1047, 1382
FalI	AAGNNNNNCTT	4 cut(s)	875, 907, 966, 998
FaqI	GGGAC	4 cut(s)	376, 483, 1110, 1193
FatI	CATG	6 cut(s)	80, 153, 277, 472, 1043, 1378
FauI	CCCGC	2 cut(s)	193, 1274
FbaI	TGATCA	1 cut(s)	1191
Fnu4HI	GCNGC	8 cut(s)	330, 516, 606, 1056, 1170, 1320, 1397, 1444
FokI	GGATG	5 cut(s)	836, 865, 1216, 1307, 1423
FriOI	GRGCYC	1 cut(s)	291
Fsp4HI	GCNGC	8 cut(s)	330, 516, 606, 1056, 1170, 1320, 1397, 1444
FspBI	CTAG	2 cut(s)	32, 1449
FspI	TGCGCA	1 cut(s)	1136
GlaI	GCGC	5 cut(s)	160, 780, 1005, 1136, 1254
GluI	GCNGC	8 cut(s)	330, 516, 606, 1056, 1170, 1320, 1397, 1444
GsuI	CTGGAG	5 cut(s)	108, 215, 425, 1359, 1410
HaeIII	GGCC	8 cut(s)	96, 227, 332, 527, 542, 548, 788, 1010
HapII	CCGG	3 cut(s)	42, 48, 93
HhaI	GCGC	5 cut(s)	161, 781, 1006, 1137, 1255
Hin1II	CATG	6 cut(s)	84, 157, 281, 476, 1047, 1382
Hin6I	GCGC	5 cut(s)	159, 779, 1004, 1135, 1253
HinP1I	GCGC	5 cut(s)	159, 779, 1004, 1135, 1253
HincII	GTYRAC	2 cut(s)	130, 535
HindII	GTYRAC	2 cut(s)	130, 535
HindIII	AAGCTT	1 cut(s)	167
HinfI	GANTC	6 cut(s)	51, 502, 617, 640, 706, 1148
HpaII	CCGG	3 cut(s)	42, 48, 93
HphI	GGTGA	3 cut(s)	31, 187, 691
Hpy166II	GTNNAC	7 cut(s)	130, 206, 460, 535, 1049, 1129, 1345
Hpy188I	TCNGA	5 cut(s)	25, 507, 622, 645, 711
Hpy188III	TCNNGA	9 cut(s)	64, 232, 376, 391, 895, 1186, 1211, 1270, 1369
Hpy8I	GTNNAC	7 cut(s)	130, 206, 460, 535, 1049, 1129, 1345
HpyCH4III	ACNGT	4 cut(s)	453, 910, 1362, 1375
HpyCH4IV	ACGT	4 cut(s)	208, 319, 462, 537
HpyCH4V	TGCA	8 cut(s)	598, 835, 860, 1043, 1106, 1169, 1319, 1378
HpyF3I	CTNAG	9 cut(s)	573, 578, 642, 720, 741, 771, 873, 1092, 1221
HpySE526I	ACGT	4 cut(s)	208, 319, 462, 537
Hsp92II	CATG	6 cut(s)	84, 157, 281, 476, 1047, 1382
HspAI	GCGC	5 cut(s)	159, 779, 1004, 1135, 1253
Ksp22I	TGATCA	1 cut(s)	1191
Kzo9I	GATC	5 cut(s)	66, 412, 612, 630, 1191
LmnI	GCTCC	2 cut(s)	93, 286
Lsp1109I	GCAGC	7 cut(s)	502, 617, 1067, 1181, 1331, 1383, 1455
LweI	GCATC	2 cut(s)	309, 814
MaeI	CTAG	2 cut(s)	32, 1449
MaeII	ACGT	4 cut(s)	208, 319, 462, 537
MaeIII	GTNAC	2 cut(s)	485, 1353
MalI	GATC	5 cut(s)	68, 414, 614, 632, 1193
MboI	GATC	5 cut(s)	66, 412, 612, 630, 1191
MhlI	GDGCHC	3 cut(s)	90, 291, 327
MluCI	AATT	7 cut(s)	940, 978, 1034, 1067, 1101, 1215, 1465
MlyI	GAGTC	3 cut(s)	611, 634, 1142
MmeI	TCCRAC	4 cut(s)	279, 297, 390, 1388
Mph1103I	ATGCAT	2 cut(s)	862, 1045
MroXI	GAANNNNTTC	1 cut(s)	978
MseI	TTAA	4 cut(s)	282, 447, 675, 1227
MspA1I	CMGCKG	2 cut(s)	403, 1058
MspI	CCGG	3 cut(s)	42, 48, 93
MspR9I	CCNGG	4 cut(s)	93, 296, 524, 1121
Mva1269I	GAATGC	2 cut(s)	742, 862
MvaI	CCWGG	3 cut(s)	296, 524, 1121
MvnI	CGCG	1 cut(s)	329
NciI	CCSGG	1 cut(s)	93
NdeII	GATC	5 cut(s)	66, 412, 612, 630, 1191
NlaIII	CATG	6 cut(s)	84, 157, 281, 476, 1047, 1382
NlaIV	GGNNCC	1 cut(s)	46
NmeAIII	GCCGAG	4 cut(s)	568, 814, 853, 1258
NsbI	TGCGCA	1 cut(s)	1136
NsiI	ATGCAT	2 cut(s)	862, 1045
NspI	RCATGY	1 cut(s)	1047
NspV	TTCGAA	1 cut(s)	141
PaqCI	CACCTGC	1 cut(s)	772
PasI	CCCWGGG	1 cut(s)	1120
PctI	GAATGC	2 cut(s)	742, 862
PdmI	GAANNNNTTC	1 cut(s)	978
PfeI	GAWTC	3 cut(s)	51, 502, 706
PinAI	ACCGGT	1 cut(s)	41
PkrI	GCNGC	8 cut(s)	331, 517, 607, 1057, 1171, 1321, 1398, 1445
PleI	GAGTC	3 cut(s)	611, 634, 1142
PmaCI	CACGTG	2 cut(s)	209, 320
PmlI	CACGTG	2 cut(s)	209, 320
PpsI	GAGTC	3 cut(s)	611, 634, 1142
Ppu21I	YACGTR	2 cut(s)	209, 320
PshBI	ATTAAT	1 cut(s)	1227
Psp124BI	GAGCTC	1 cut(s)	291
Psp6I	CCWGG	3 cut(s)	294, 522, 1119
PspCI	CACGTG	2 cut(s)	209, 320
PspGI	CCWGG	3 cut(s)	294, 522, 1119
PspN4I	GGNNCC	1 cut(s)	46
PspPI	GGNCC	3 cut(s)	203, 226, 1009
PvuII	CAGCTG	2 cut(s)	403, 1058
RsaI	GTAC	4 cut(s)	239, 930, 953, 1130
RsaNI	GTAC	4 cut(s)	238, 929, 952, 1129
SacI	GAGCTC	1 cut(s)	291
SaqAI	TTAA	4 cut(s)	282, 447, 675, 1227
SatI	GCNGC	8 cut(s)	330, 516, 606, 1056, 1170, 1320, 1397, 1444
Sau3AI	GATC	5 cut(s)	66, 412, 612, 630, 1191
Sau96I	GGNCC	3 cut(s)	203, 226, 1009
SchI	GAGTC	3 cut(s)	611, 634, 1142
ScrFI	CCNGG	4 cut(s)	93, 296, 524, 1121
SduI	GDGCHC	3 cut(s)	90, 291, 327
SfaNI	GCATC	2 cut(s)	309, 814
SfuI	TTCGAA	1 cut(s)	141
SgrAI	CRCCGGYG	1 cut(s)	41
SinI	GGWCC	1 cut(s)	203
SmlI	CTYRAG	3 cut(s)	881, 895, 1174
SmoI	CTYRAG	3 cut(s)	881, 895, 1174
Sse9I	AATT	7 cut(s)	940, 978, 1034, 1067, 1101, 1215, 1465
SsiI	CCGC	6 cut(s)	186, 329, 800, 809, 971, 1281
SspMI	CTAG	2 cut(s)	32, 1449
SstI	GAGCTC	1 cut(s)	291
StyD4I	CCNGG	4 cut(s)	91, 294, 522, 1119
StyI	CCWWGG	2 cut(s)	528, 924
TaaI	ACNGT	4 cut(s)	453, 910, 1362, 1375
TaiI	ACGT	4 cut(s)	211, 322, 465, 540
TaqI	TCGA	8 cut(s)	114, 141, 306, 335, 390, 615, 638, 912
TaqII	GACCGA	1 cut(s)	191
TasI	AATT	7 cut(s)	940, 978, 1034, 1067, 1101, 1215, 1465
TatI	WGTACW	1 cut(s)	951
TauI	GCSGC	1 cut(s)	332
TfiI	GAWTC	3 cut(s)	51, 502, 706
Tru1I	TTAA	4 cut(s)	282, 447, 675, 1227
Tru9I	TTAA	4 cut(s)	282, 447, 675, 1227
TscAI	CASTG	1 cut(s)	1380
TseI	GCWGC	7 cut(s)	515, 605, 1055, 1169, 1319, 1396, 1443
TspDTI	ATGAA	8 cut(s)	569, 767, 833, 869, 933, 1326, 1340, 1395
TspGWI	ACGGA	2 cut(s)	701, 1425
TspRI	CASTG	1 cut(s)	1380
VpaK11BI	GGWCC	1 cut(s)	203
VspI	ATTAAT	1 cut(s)	1227
XapI	RAATTY	2 cut(s)	1034, 1067
XceI	RCATGY	1 cut(s)	1047
XcmI	CCANNNNNNNNNTGG	1 cut(s)	535
XmnI	GAANNNNTTC	1 cut(s)	978
XspI	CTAG	2 cut(s)	32, 1449
Zsp2I	ATGCAT	2 cut(s)	862, 1045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.