No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0323051 RchiOBHm_Chr2g0156421 RchiOBHm_Chr3g0481411 RchiOBHm_Chr3g0486151 RchiOBHm_Chr4g0413911 |
| rosa_multiflora | Rmu_sc0002146.1_g000003 Rmu_sc0010560.1_g000006 |
| rosa_rugosa | Rorug05G0461400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 53 |
| AluBI | AGCT | 1 cut(s) | 174 |
| AluI | AGCT | 1 cut(s) | 174 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Alw44I | GTGCAC | 1 cut(s) | 4 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 117 |
| Ama87I | CYCGRG | 2 cut(s) | 148, 175 |
| ApaLI | GTGCAC | 1 cut(s) | 4 |
| ApeKI | GCWGC | 7 cut(s) | 54, 74, 94, 108, 117, 153, 156 |
| AspLEI | GCGC | 3 cut(s) | 54, 139, 147 |
| AsuNHI | GCTAGC | 1 cut(s) | 170 |
| AvaI | CYCGRG | 2 cut(s) | 148, 175 |
| BaeGI | GKGCMC | 1 cut(s) | 8 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BbvI | GCAGC | 7 cut(s) | 66, 81, 86, 104, 120, 140, 168 |
| BfaI | CTAG | 2 cut(s) | 171, 181 |
| BfmI | CTRYAG | 2 cut(s) | 95, 154 |
| BfoI | RGCGCY | 1 cut(s) | 148 |
| BisI | GCNGC | 7 cut(s) | 55, 75, 95, 109, 118, 154, 157 |
| BlsI | GCNGC | 7 cut(s) | 56, 76, 96, 110, 119, 155, 158 |
| BmeT110I | CYCGRG | 2 cut(s) | 148, 175 |
| BmsI | GCATC | 2 cut(s) | 14, 52 |
| BmtI | GCTAGC | 1 cut(s) | 174 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseSI | GKGCMC | 1 cut(s) | 8 |
| BseXI | GCAGC | 7 cut(s) | 66, 81, 86, 104, 120, 140, 168 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BsiHKCI | CYCGRG | 2 cut(s) | 148, 175 |
| BsoBI | CYCGRG | 2 cut(s) | 148, 175 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| BspMAI | CTGCAG | 2 cut(s) | 99, 158 |
| BspOI | GCTAGC | 1 cut(s) | 174 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 117 |
| BstC8I | GCNNGC | 3 cut(s) | 79, 135, 172 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstH2I | RGCGCY | 1 cut(s) | 148 |
| BstHHI | GCGC | 3 cut(s) | 54, 139, 147 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 71, 114, 117, 153, 162, 171 |
| BstSFI | CTRYAG | 2 cut(s) | 95, 154 |
| BstSLI | GKGCMC | 1 cut(s) | 8 |
| BstV1I | GCAGC | 7 cut(s) | 66, 81, 86, 104, 120, 140, 168 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| BtsI | GCAGTG | 1 cut(s) | 34 |
| BtsIMutI | CAGTG | 1 cut(s) | 34 |
| Cac8I | GCNNGC | 3 cut(s) | 79, 135, 172 |
| CaiI | CAGNNNCTG | 1 cut(s) | 117 |
| CfoI | GCGC | 3 cut(s) | 54, 139, 147 |
| CviJI | RGCY | 9 cut(s) | 44, 81, 94, 117, 153, 165, 170, 174, 180 |
| CviKI_1 | RGCY | 9 cut(s) | 44, 81, 94, 117, 153, 165, 170, 174, 180 |
| Eco88I | CYCGRG | 2 cut(s) | 148, 175 |
| Fnu4HI | GCNGC | 7 cut(s) | 55, 75, 95, 109, 118, 154, 157 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 7 cut(s) | 55, 75, 95, 109, 118, 154, 157 |
| FspBI | CTAG | 2 cut(s) | 171, 181 |
| FspI | TGCGCA | 1 cut(s) | 53 |
| GlaI | GCGC | 3 cut(s) | 53, 138, 146 |
| GluI | GCNGC | 7 cut(s) | 55, 75, 95, 109, 118, 154, 157 |
| HaeII | RGCGCY | 1 cut(s) | 148 |
| HhaI | GCGC | 3 cut(s) | 54, 139, 147 |
| Hin6I | GCGC | 3 cut(s) | 52, 137, 145 |
| HinP1I | GCGC | 3 cut(s) | 52, 137, 145 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyAV | CCTTC | 1 cut(s) | 155 |
| HpyCH4V | TGCA | 6 cut(s) | 6, 27, 97, 125, 133, 156 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 71, 114, 117, 153, 162, 171 |
| HspAI | GCGC | 3 cut(s) | 52, 137, 145 |
| LpnPI | CCDG | 6 cut(s) | 43, 63, 67, 75, 83, 97 |
| Lsp1109I | GCAGC | 7 cut(s) | 66, 81, 86, 104, 120, 140, 168 |
| LweI | GCATC | 2 cut(s) | 14, 52 |
| MaeI | CTAG | 2 cut(s) | 171, 181 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MnlI | CCTC | 1 cut(s) | 95 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 71, 114, 117, 153, 162, 171 |
| NheI | GCTAGC | 1 cut(s) | 170 |
| NmeAIII | GCCGAG | 1 cut(s) | 146 |
| NsbI | TGCGCA | 1 cut(s) | 53 |
| PkrI | GCNGC | 7 cut(s) | 56, 76, 96, 110, 119, 155, 158 |
| PstI | CTGCAG | 2 cut(s) | 99, 158 |
| PstNI | CAGNNNCTG | 1 cut(s) | 117 |
| SatI | GCNGC | 7 cut(s) | 55, 75, 95, 109, 118, 154, 157 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SetI | ASST | 2 cut(s) | 131, 176 |
| SfaNI | GCATC | 2 cut(s) | 14, 52 |
| SfcI | CTRYAG | 2 cut(s) | 95, 154 |
| SspMI | CTAG | 2 cut(s) | 171, 181 |
| TscAI | CASTG | 1 cut(s) | 34 |
| TseI | GCWGC | 7 cut(s) | 54, 74, 94, 108, 117, 153, 156 |
| TspRI | CASTG | 1 cut(s) | 34 |
| VneI | GTGCAC | 1 cut(s) | 4 |
| XspI | CTAG | 2 cut(s) | 171, 181 |